KEGG   Zootoca vivipara (common lizard): 118085525
Entry
118085525         CDS       T07275                                 
Symbol
RFC3
Name
(RefSeq) replication factor C subunit 3
  KO
K10756  replication factor C subunit 3/5
Organism
zvi  Zootoca vivipara (common lizard)
Pathway
zvi03030  DNA replication
zvi03410  Base excision repair
zvi03420  Nucleotide excision repair
zvi03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:zvi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    118085525 (RFC3)
   03410 Base excision repair
    118085525 (RFC3)
   03420 Nucleotide excision repair
    118085525 (RFC3)
   03430 Mismatch repair
    118085525 (RFC3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:zvi03032]
    118085525 (RFC3)
   03036 Chromosome and associated proteins [BR:zvi03036]
    118085525 (RFC3)
   03400 DNA repair and recombination proteins [BR:zvi03400]
    118085525 (RFC3)
DNA replication proteins [BR:zvi03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    118085525 (RFC3)
  DNA Replication Termination Factors
   ELG1-RFC complex
    118085525 (RFC3)
Chromosome and associated proteins [BR:zvi03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    118085525 (RFC3)
DNA repair and recombination proteins [BR:zvi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     118085525 (RFC3)
  Check point factors
   HRAD17(Rad24)-RFC complex
    118085525 (RFC3)
SSDB
Motif
Pfam: RFC_C RCF1-5-like_lid DNA_pol3_delta2 Rad17 AAA AAA_22 AAA_16 ABC_tran AAA_2 AAA_11 DUF2247 Sigma54_activ_2 T4SS-DNA_transf
Other DBs
NCBI-GeneID: 118085525
NCBI-ProteinID: XP_034972162
LinkDB
Position
LG5:25062232..25085784
AA seq 356 aa
MSLWVDKYRPNSLGKVDYHRDQAAQLRNLVQCGDFPHLLVYGPSGAGKKTRIMCLLRELY
GSGVEKLRIEHQSITAPSKKKIEISTIASNYHLEVNPSDAGNSDRVVIQELLKTLAQSQQ
LETSTQRDFKVVLLTEVDKLTKDAQHALRRTMEKYMATCRLILCCNSTSKVIAPIRSRCL
AVRVPAPSIEDICNVLSVVCKKEGLVLPRELAQRIAEKSGRNLRKALLMCEACRVQQYPF
TPDQDISETDWEVYLRETANAIVGQQTPQRLLEVRGRLYELLTHCIPPEIIIKGLLTELL
NNCDGQLKGEVAQMAAFYEHRLQLGSKAIYHLEAFVAKFMAIYKKFMEDGLEAMMF
NT seq 1071 nt   +upstreamnt  +downstreamnt
atgagtctctgggtggacaaataccggccgaactccctcggcaaagtggactatcaccgg
gatcaggcagcgcagcttcgcaacctggttcagtgtggtgactttcctcatctgttagtg
tatgggccttcaggagcagggaaaaagaccagaataatgtgcctgctgagagaactgtat
ggctctggagtggagaagctgaggattgaacatcagagcataactgcaccttctaaaaag
aagattgaaattagcactattgccagcaactatcaccttgaagttaacccaagtgatgca
ggaaacagtgaccgggtggtaattcaggaattactgaagacattagctcaatcacagcaa
cttgagacaagcacccagcgagattttaaagtggtgctgttgactgaagtggacaagctt
acaaaagatgcccagcatgcgttgcgccgaaccatggagaagtatatggctacctgcaga
ttaattctgtgctgcaattctacatcgaaagtcattgcacctatccgaagcaggtgcctt
gcagtgcgagtgcctgcacccagcattgaagatatctgcaacgtattgtctgttgtgtgt
aagaaggagggtctggttcttcctcgagaacttgctcagaggattgcagaaaagtctggc
cgaaatctccgaaaggcccttctgatgtgtgaggcatgcagggtgcaacagtatcctttc
actccagaccaagacatttctgagacggactgggaggtatatctgagagagacggcaaac
gccattgttggtcagcagaccccgcagaggctcctggaagttcgtgggcgactctatgaa
ctcttgacccattgcattcctccagagattataataaagggccttctgactgaacttctg
aacaactgtgatggacagctgaaaggagaggttgcacagatggcagctttctatgagcac
cgactgcagctgggcagcaaggccatttatcacctggaagcatttgtggctaagtttatg
gccatctataagaagtttatggaagatggactagaagccatgatgttctga

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