Zootoca vivipara (common lizard): 118085574
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Entry
118085574 CDS
T07275
Symbol
NUP98
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96 isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
zvi
Zootoca vivipara (common lizard)
Pathway
zvi03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
zvi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
118085574 (NUP98)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zvi03019
]
118085574 (NUP98)
03036 Chromosome and associated proteins [BR:
zvi03036
]
118085574 (NUP98)
Messenger RNA biogenesis [BR:
zvi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
118085574 (NUP98)
Chromosome and associated proteins [BR:
zvi03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
118085574 (NUP98)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
118085574
NCBI-ProteinID:
XP_034972277
LinkDB
All DBs
Position
LG5:1194792..1236982
Genome browser
AA seq
1804 aa
AA seq
DB search
MFNKSFGTPFGGNTGGFGTTSTFGQNAGFGTTSGGAFGTSAFGTNNNAGGLFGTAQTKPG
TGGLFGSSTFSQPATSSTSTGFGFGTSTGTSSGLFGTASTGGGLFSSQNNAFAQSKPVGF
GNFGTSTSSGGLFGTTNTTANPFGGTSGSLFGSTSFTVPTGTTIKFNPPTGTDTMVKSGV
STNISTKHQCITAMKEYESKSLEELRLEDYQANRKGPTNPVGAGATAGLFGSSTATSSAA
TGLFGSTTTNTGFSYGQNKTGFGTSTTGFGTGTGGLFGPTQQTTSLFNKPFGQATTAPNA
GFSFGNTSTLGQPNTNTMGLFGATQPSQTGSLFGTATNTNTATAFGTGTGLFGQPNTGFG
VGGSSLFSNKPAGFGTTTTSAPSFGTTTTGMFGFGANTTGNSLFGNKPAAGALGTGLGTG
FGTALSAGQTSLFGNTQPKLGSTLGTGAFGAPGFNTSTATLGFGAPQPAAALTDPNASAA
QQAILQQHLNSLTYSPFGDSPLFRNPMSDPKKKEERLKPTNPAAQKALTTPTHYKLTPRP
ATRVRPKALQTTGSSKSHLFDGLDDDEPALSNGAFMPKKSIKKLVLKSIKASSLFSPTNC
EADDLASPSEYPENGERFHFLSRSADEIHRQDGEQQEEEDCPREVTRYYSNPIAKPIPQT
PESAMHKHHNNVDDTLLALNVRPALRNGLEGSSEDASYHEESLQEDQEEEAEGMHQAHPA
GIVLTRVGYYTIPSMEELAKMTNDKGECNVTDFTIGRKGYGSIYFEGEVNLTNLNLDEIV
HIRRKEVIVYPDDEQKPPIGKGLNRRAEVTLDGVWPTDKTSRCLIKSPERLTEMNYEGRL
EAVSRKQGAQFKEYRPETGSWVFKVAHFSKYGLQDSDEEEEEHPSKVEAKKQKTAQVPPP
GQLASQQMALGGKPAPPSKSPDVEQLGKVVEFDSDMADITQEPAQDLVAEESFAEEQEPV
TASAHIASSLDINPHTLQIMKASLLVDEEDLDLILDHRFGKQAAPVDTSQDLCSPRLPIS
SLMRGRKSRPSVGGLLQSRLSGGSLRVPTPSLQDRCSPRTSLLGSALPAPTWSVGSPLTG
AFTMPSLDPDMPLKTVGVRRHPELVPLEKSVTYGKGRLLKDMALFMGRSFRVGWGPNRIL
VHSGEQLSTLGEPEDLRNQSMEYGFLPTPVAPKQLSESPFKVHVEKLSLEGKAADEDLDS
YLVPLEIKLKQSTVHMDEPCPFLTPNPGVAAIHEYAKWATETSADPEEREEAAVKDWCLV
WTLCEALWGHLKELEARLDEPTEYVLALERRRAFSHWLSQTAAERIKNEVSLAQNDSPAQ
AVFSYLTGKQISEACRLAQHSGDHRLALLLSQLAGSQDVRELLAMQLADWHELQADCFIQ
EERLHIFALLAGKPVWHLSERRSINICAHLDWKRSLAIHLWYLLPSTAPLSKALSMYEAA
FQDSPEGEKYACSPLPPYLEGSGCVIEEGDPQHPLRDVCFHLLKLYSDRCYDLHQLLDPK
SITADPLDYRLSWHLWEVLRALNYTHLSEQYQGVLNASFAAQLESEGLWEWAIFVLLHTP
SANVRERAVRELLNRHCRLQETPESWSKEAFLMERLCVPPEWIHEAKAVRARMEGDKHKE
ALYLFRAGHWNQCHRLVTRHLASDAIINENYTYLKGFLEDLSAPERSTLIQDWDTAGLVF
LDYIRIIEMLDRIQQLDCSGYELEELHTKVTSLCNRIELLQCRNAKDRLAQSEMAKRIVD
ILRVVLSLQHPPDSTSDSTPDVQRVPLRLLAPHIGRLPMPEDYVLEELRSLTQGYLRELT
VAAQ
NT seq
5415 nt
NT seq
+upstream
nt +downstream
nt
atgtttaacaaatcatttggaacgccttttggaggcaacacaggtggctttgggacgact
tcaacttttgggcagaatgctggctttggcactacaagtggaggagcttttgggacatct
gcttttggaacaaataataatgcaggaggactgtttgggactgcgcagaccaagccaggt
acaggagggttgtttggttccagcaccttcagccagccagccacttcttctaccagcact
ggctttggatttggaacatcgactggcacttccagtgggttgtttgggacagcaagcact
ggcggaggcctcttttcatcccagaacaatgcctttgcacagagtaaacctgtggggttt
ggcaactttgggacaagtactagcagcgggggtttatttggaaccactaacacaactgcc
aatccatttggggggacgtccggttccctcttcggatcaaccagctttaccgttccaact
ggcaccaccattaaattcaatcccccaacgggtactgacactatggtgaagtctggagtc
agcacaaacatcagcaccaaacatcagtgcattactgctatgaaagaatatgaaagcaaa
tcgctagaggagcttcgtttggaagactatcaagcgaacaggaaaggtcccaccaaccct
gtaggagctggagccacggcaggtttgtttggctcctccactgctacctccagcgcagcc
acaggactcttcggctccaccaccactaacacgggcttttcatatggacagaataaaaca
gggtttggaaccagtacaacgggttttggaacaggaacaggaggcctctttggcccgact
caacaaaccaccagcctcttcaacaagccttttggccaggccacgactgcaccaaacgca
ggcttttcctttgggaacaccagcacccttggacaacccaacacaaacacaatgggttta
tttggagcaacacagccctcacaaacgggaagcctttttggaacagctaccaatacgaac
actgctactgcatttggaactgggacaggtctctttggacaacccaatacaggatttggt
gttggtggctcgtccctcttcagcaacaagcctgctggatttggaaccacgacaaccagc
gcgccctcgtttggaacaactacgaccgggatgtttggttttggtgcaaacaccacggga
aatagcctgtttggaaacaagcctgcagctggggctctgggcacgggacttggaacagga
tttggaacagccctgagtgcaggacagacttcgctgtttgggaacacccagcctaaacta
gggagtacgctgggaacaggagcctttggcgcccctggatttaatacgtcaacagctact
ctgggctttggagctccccaacctgcggcggctttgacggacccaaatgcttcagctgct
cagcaagcgattcttcagcagcacctcaacagcttgacatactcgccctttggggattcc
cccctcttcagaaacccgatgtctgacccaaagaagaaagaggagagactgaagccaacc
aatccagcggcccagaaggcattgaccacccctactcactacaagctgacgcctcgccct
gcgaccagggtgcgtccgaaagctttgcagaccacgggctcctctaaatcccacctgttt
gacggcctggatgatgatgagccagccctgtcgaacggggccttcatgcccaagaaaagc
attaagaagctagttttgaagagtatcaaggccagcagccttttctctccgaccaactgt
gaagctgatgaccttgcctctccctcggagtacccagagaacggagaacgattccacttc
ctttcccggtcagctgatgagatccacaggcaggatggagagcagcaggaggaggaagac
tgtcctcgtgaagtcacgcggtactattccaaccccattgccaagcccatcccacagacc
cccgagagtgccatgcacaagcaccacaacaatgtggacgacaccctcctcgccctgaat
gtgcgtcctgccctgcggaacgggctggaaggcagcagcgaggatgcctcctaccacgag
gagtccctgcaggaggaccaggaagaggaggcagagggcatgcaccaggctcatccggca
ggaattgttttaacccgagttggctactacaccattccatccatggaagaattggccaaa
atgacaaacgacaaaggagaatgcaatgtgacagacttcaccattggccgaaaaggctat
ggctcaatctactttgaaggcgaagtgaacctgactaacctgaacctggatgagattgtg
cacatccgtcggaaagaagtgattgtctacccagacgatgaacagaagccacccattggg
aaaggactgaacaggagagctgaggtcactttggatggcgtttggcccactgacaaaacc
tcgcgttgcctgataaagagcccggaacggctaaccgaaatgaactacgaaggcaggctg
gaggctgtctcccggaagcagggtgcccagttcaaggagtaccgccctgaaactggttcg
tgggtattcaaggtggctcacttctcaaaatacggtctgcaagattctgatgaggaagag
gaggagcacccatcgaaagtggaggcaaagaaacagaaaacggctcaagtgcccccgcca
ggccagttggcgtctcagcaaatggctctaggtgggaaaccagcacctccttccaagagc
ccagatgttgagcagcttgggaaggttgtggaatttgacagcgacatggcagacatcacc
caggagccggcccaggacttggtcgcggaagagagttttgcagaggagcaggaaccagtg
acagcttctgcacacattgcatcctctctggacatcaaccctcacacattgcagatcatg
aaagcctccttgcttgtggatgaggaggacttggacctgatccttgaccaccgttttggc
aagcaggctgcaccagtggacacatcccaagacctctgttcccccagacttcccatctcc
tccttgatgcgagggcgcaagagccgcccctcagttggtgggctgctgcagtcaagactc
tcaggcggatctttacgcgtcccaactccctccctccaagacagatgcagcccaaggact
tccttgctgggcagcgctcttcctgccccaacttggtctgtcggttctccactgaccggc
gcgttcacaatgcccagcctggatcctgacatgccactgaaaacagtgggcgtccgcagg
catcctgagctggtgcctctggagaagtctgtcacctacgggaaaggaaggctgctgaag
gatatggccctcttcatgggacgctccttccgtgtcggctgggggcccaaccggatcctc
gtccacagcggggagcagctgagcacattgggcgagccagaagatctccgcaaccagtcc
atggagtatggattcttgccaacacctgttgctcctaaacagctctcggagtctcccttt
aaggttcacgtggagaagctgagcttggaaggaaaggcagctgacgaggacctagactca
tacctcgttccactggagatcaagctgaagcagagcactgtccacatggatgagccgtgc
cctttcctgacccccaaccctggtgtagctgctatccacgagtatgccaagtgggcgacg
gagacgtctgcagacccagaagaaagggaagaagctgcagtgaaagactggtgcttggta
tggaccctgtgtgaggcgctctggggccacttgaaggagctggaggcccgcttggatgag
cccaccgagtacgtccttgctctggagcgccggagagccttctcccactggctgtcgcaa
acggctgctgagcggatcaagaacgaggtctcgcttgcccagaacgacagtcctgcccag
gccgtcttcagctaccttactgggaagcagatcagcgaagcttgccggttggcgcaacat
tctggggaccaccggctggctctgctcctctcgcagctggcagggagccaggatgtccgg
gagctccttgccatgcagctggcagactggcatgagctccaggcagactgcttcatccag
gaggagaggctgcacatatttgcccttttagctggcaagccggtgtggcatttgtcagag
agaaggagcatcaacatctgcgcccatctggattggaagcgttctctcgccatccacctt
tggtacctgcttccttctacagcgcctctttccaaggccctcagcatgtatgaagctgca
ttccaggactccccggagggagagaagtatgcttgttctccgctgcctccatatctggaa
ggctcaggctgtgtgattgaggaaggcgatccacaacaccccctccgagacgtgtgcttt
cacctgctaaagctgtacagtgataggtgttacgatctccaccagctgcttgacccgaag
agcatcacagctgaccccttggactaccgcctcagctggcacctgtgggaagtgctgcgt
gccttaaattacacccacctctcagagcaataccagggggtgctgaacgccagctttgcc
gcccagctggagagcgaggggctgtgggaatgggccatctttgtgcttcttcacaccccc
agtgcaaacgtgcgagagagagccgtgcgtgagctgctgaaccgccactgcaggctgcag
gagacgcccgagtcatggagcaaggaagccttcctgatggagaggttgtgtgtgccgcca
gagtggatccacgaggccaaagccgtgagggccaggatggaaggggacaagcataaggag
gctctctacctgttcagggcagggcactggaaccagtgccacaggctggtcaccaggcac
ttggcttcagatgccattattaacgaaaactacacctatctgaaagggtttttggaagac
ctgtctgctccagagcgcagcaccctcatccaggattgggacaccgcagggctggttttc
ttagactacatccggatcattgagatgctcgacaggattcagcagctggattgctccggg
tacgaactggaggaactgcacactaaagtgacgtccctttgcaacaggatagagctgctc
cagtgccgcaatgccaaggataggctggctcagtctgaaatggccaagcgcattgtggac
atcctgcgcgtggttttgagcctgcagcaccctccggactccacatcggactccacccca
gacgtgcagagagtgccgctgcgcctgctcgccccccacatcggccgcctccccatgccc
gaggactacgttctggaggagctgcgtagcctcacccagggctacctgcgggaactgacg
gtggcggcgcaatga
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integrated database retrieval system
