Zootoca vivipara (common lizard): 118085702
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Entry
118085702 CDS
T07275
Symbol
ZC3H12C
Name
(RefSeq) probable ribonuclease ZC3H12C isoform X1
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
zvi
Zootoca vivipara (common lizard)
Brite
KEGG Orthology (KO) [BR:
zvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zvi03019
]
118085702 (ZC3H12C)
Messenger RNA biogenesis [BR:
zvi03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
118085702 (ZC3H12C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
Regnase_1_C
UBA_6
UBA_N4BP1_C
zf-CCCH_2
zf-CCCH_4
Motif
Other DBs
NCBI-GeneID:
118085702
NCBI-ProteinID:
XP_034972533
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Position
LG5:19927675..19971972
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AA seq
888 aa
AA seq
DB search
MDNKKKLQEYRILYIPEYRKINKVESSTCSSFMGLKDHLRHDLGHLYEDSTETQISAIAP
WSMVEKPTMDKVNSRKEDANKETSEETGSSSCDSEESTNSDNELERPAIIGPESCFLPKT
HRPLCRSPCLEPHILKRNEILQDLKLEEAQIGSKELKKPPDAVKEYQTKLEFALKLGYSE
EQVQLVLNKLGTDALINDILGELVKLGNKTETDQSVSNINTSIMREASSVESQRSDSPLP
EDVPVDGDNLRPIVIDGSNVAMSHGNKEVFSCRGIKLAVDWFLERGHKDVTVFVPAWRKE
QSRPDALITDQEILRKLEKEKILVFTPSRRVQGRRVVCYDDRFIVKLAFESDGIIVSNDN
YRDLANEKPEWKKFIDERLLMYSFVNDKFMPPDDPLGRHGPSLDNFLRKKPIVPEHKKQP
CPYGKKCTYGHKCKYYHPERGNQPQRSVADELRAMSRSTAAKAASEGGLVKSNSVPCSTK
IDSTSDLKRATPKRQSDPSIRTQVYQDLEEKLPTKNKLETRSVPSLVSIPNSAAAKPQST
APLSNGLPSGVHFSPQDQRAQGPYPPVLMATKNHGTPMPYEQYPKCDSPVDASYYSMLNA
YSNLSISGPRSPERRFSLDTDYRISSVASDCSSEGSTSCGSNDSYMGYSDRSYVSSPDPQ
LEENLKCQHLHPHSHLNSQPFLQGYHETLSRVQSYSHEEPKHHHKSPLPYMAVHLQHPAV
GARSSCPSDYPAPQSSPRSKGVHLGRALVSTRVDSISDSRLYDNSPLRQRKRYSGQDGLS
SWDRQGYGLDAYGYRQTYSLPSNPSQPCYEQFAFQSLPEQQDQPWRIPYCGIPQDPPRYQ
DNREKVYINLCNIFPPDLVRIVMKRNPHMTDAQQLAAAILVEKSQLGY
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atggacaataaaaaaaaattacaagaatacaggatactttatatcccggaatacaggaaa
atcaacaaagtggagtcaagtacatgcagcagcttcatgggcttgaaggatcacttgaga
catgaccttggccacctctatgaggacagcactgagactcaaataagtgccattgcacct
tggtcaatggtagagaaaccaaccatggataaagttaactctagaaaggaggatgctaac
aaggagacttctgaagaaactggaagctccagttgtgattctgaggagagcacaaattct
gataatgaattggaacgaccagctataattggaccagaatcatgcttcttacctaagact
cacaggccactgtgcaggtctccttgcttagaaccgcatatattaaagcgcaatgaaata
ttgcaagaccttaagctggaggaagctcagatagggtctaaagaactcaagaaacctcct
gacgcggtgaaagagtatcaaaccaaactggagtttgcacttaagttaggttattctgag
gaacaggttcaacttgtcctgaataagcttggtactgatgctttaatcaatgatatattg
ggagaacttgtcaaacttggaaataaaactgagacggatcagagtgtgagtaacattaac
actagcataatgcgagaagcatcttctgtcgagtctcagagatctgactccccgcttccg
gaagatgtgccagtggatggtgataacctcagacctatagttattgatggcagcaatgtg
gcaatgagccatggaaacaaagaagtattctcttgtcgggggatcaaactggcggtggac
tggtttttggaaagaggccacaaagatgtcacggtgtttgtaccagcgtggaggaaagaa
cagtcccgaccggatgctctcatcacagaccaagaaatcctgcgtaaattagagaaggag
aaaattttggtgttcaccccatcccgccgtgttcaggggagaagggtggtgtgctatgat
gaccggttcatagtaaagttggcctttgagtcggatggcataattgtgtcaaatgataac
tacagggatcttgcaaatgaaaagccagaatggaagaagttcattgatgaacggctgctg
atgtattcatttgtcaatgacaaatttatgcctcctgatgacccccttggccgccatggc
ccaagcctggataattttctgaggaagaaacctattgtaccagaacataagaagcaacca
tgtccatatgggaagaaatgcacttatggacacaaatgcaaatactaccacccagaaaga
ggaaatcagcctcagaggtcagtagcggacgagcttcgtgccatgtccaggagcacagct
gccaaagctgctagcgaaggaggtctggtgaaaagcaacagcgtcccttgcagcactaag
atagatagcacttcggatctcaagcgagccactccaaagaggcagtcagatcctagcata
aggactcaggtctaccaagacttggaggaaaagcttcccaccaaaaacaagttggaaacc
aggtctgtaccttccctagttagtataccgaactctgctgctgcaaaaccccaaagtact
gcacctttgagcaatggccttccctccggagttcatttctcacctcaggatcaaagagcg
caagggccgtatcctccagtgttgatggcaaccaaaaaccacggaacgccaatgccttac
gagcagtatcccaaatgtgactctcctgtggatgccagctactattctatgctgaacgca
tactcgaacctaagcatctctggcccgcgaagtcccgaaaggcgtttctctttggacaca
gattacaggattagctctgtagcttccgactgcagcagcgaagggagcacgagctgtggc
agcaatgattcctacatgggctacagcgaccggtcctatgtgagctctcccgacccccag
ctcgaagagaacttgaagtgccagcatttgcacccccacagccacctgaactcccagccc
ttcctgcagggctaccacgagacgctgagcagggtgcagagctacagtcacgaagaacca
aagcaccaccacaaatctccgcttccctacatggcggtccacctccagcatcccgccgtc
ggcgctcggtccagttgccccagtgactacccagctccccagagctcgccccgctccaag
ggcgtacatctggggagagccctcgtgtctacccgagtagacagcatatcggactcgcgt
ttgtacgataattccccgctaaggcaacggaaaaggtactccggccaagacgggctcagc
agctgggacaggcaaggctacgggcttgacgcgtacggctaccgccaaacttactccttg
cccagcaaccccagccagccgtgttacgagcagtttgccttccaaagcttgcctgagcag
caggaccagccttggcggatcccttactgtgggatcccccaggacccgccgcggtaccag
gataaccgagagaaggtctacatcaacctgtgcaacattttccctcccgatcttgtgaga
attgtcatgaaaaggaaccctcacatgacggacgctcagcaactcgctgcagccattttg
gtggagaaatctcagctcggttattga
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