Zootoca vivipara (common lizard): 118085878
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Entry
118085878 CDS
T07275
Symbol
HIF3A
Name
(RefSeq) hypoxia-inducible factor 3-alpha isoform X1
KO
K09096
hypoxia-inducible factor 3 alpha
Organism
zvi
Zootoca vivipara (common lizard)
Brite
KEGG Orthology (KO) [BR:
zvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zvi03000
]
118085878 (HIF3A)
Transcription factors [BR:
zvi03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
118085878 (HIF3A)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_3
PAS_11
PAS
HIF-1
PAS_9
PAS_4
HLH
PAS_2
HIF-1a_CTAD
Motif
Other DBs
NCBI-GeneID:
118085878
NCBI-ProteinID:
XP_034972789
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Position
LG6:17672643..17723994
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AA seq
765 aa
AA seq
DB search
MRRRRKRLRCRSWYRSTTEIRKEKSRDAARCRRSKETEVFYQLAHTLPFARGVSAHLDKA
SIMRLTISYLRMHKLLNSGEWRDEVEAEEQVDAYYLKALDGFLMVLTEEGDMIYLSENVN
KHLGLSQLELIGHSVFDFIHPCDQEELQDVLSPRQGFSKKKEVKTERSFSLRMKSTLTTR
GRTVNLKSATWKVLHCSGHMRSYAPAKPAGEKEAEGGFVEPPLRCLVLICEAIPHPANIE
TPLDSGTFLSRHTMDMKFTYCDERIAEVAGYTPEDLLGCSIYEYIHALDSDSVSKSINTL
LSKGQAVTGQYRFLARNGGYLWTQTQATVISSSKNSQPESIVCVHFILSQVEEMGLVLSL
EQTERQGEHRRLPPPSLEGLDSDGALDDLDANGGDTIINLSFELRGPKVLAFLRPANISE
EELQLDPKRFCSPDLQKLLGPIFDPPGAQSQAPGTLRARPPAAPPKPAPVAKNASGGRSP
VDPVELPEELLFDMENVQKLFASSKEAQSMETALQDYEGLDLEMLAPYISMDDDFQLSST
DHPPWLAEKRGGVLGTGTRPTSPPPRPRSRSFHGVSPRPPEQATLPRWGSDTSLSHPRPV
QSPGSPPCGAEQVVEMVASVKIQAVQDGSGQNGQAASVGGRKRARELSVEEERDVFLEAG
LPKRTRGLEPDGFLMPSLSLGFLLSVEECLDAKSERGFGGTMSLGRKLLSLEEPMGLLGD
MLPFVVDGPALSQLALFDAEDEASVQSGQHFQLGEELLVELDQAT
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atgcggcggcgccggaagaggctgaggtgcaggagctggtacaggtctaccacagaaatc
cggaaggagaaatcgagggacgcggcacgatgccgccgcagcaaggagacggaggttttc
taccagctggcacacaccctgcccttcgcccggggggtcagtgcccacctggacaaggcc
tccatcatgcggctgaccatcagctacctgcggatgcacaagctactgaattcaggagaa
tggagagatgaggtggaggcagaggagcaggtggacgcgtattacctgaaggccctggat
ggcttcctcatggtcctgaccgaggaaggggacatgatctacctctctgagaacgtcaac
aagcacctgggcctcagtcagctggagctcattggtcacagcgtatttgacttcattcat
ccctgtgatcaagaagaactgcaagatgtattgagcccaaggcagggtttctcaaagaag
aaggaggtgaagacggaacgcagcttctccttgcgcatgaagagcaccctcacgaccagg
gggcgcaccgtcaacctcaagtctgccacctggaaagtgctccattgctccggccatatg
cggtcctatgcacccgccaagccagcaggggaaaaggaggcagaaggcggcttcgtggag
ccccctttgaggtgtttggtgctgatctgcgaggccatcccgcaccccgctaacatcgag
accccgctggacagcggcaccttcctcagccgccacaccatggacatgaagtttacctat
tgcgatgagaggatcgcagaggtggctggttacacgcctgaagacttgctgggctgctcc
atttacgagtatatccacgccctggactctgattctgtcagcaagagcatcaacaccctg
ctgagcaaggggcaggcggtgaccgggcagtaccgtttcctggccaggaacggcggctac
ctgtggacccagactcaagccacggtcatctccagcagcaaaaactcccagcccgagagc
atcgtctgtgtgcacttcatcttgagccaggtggaagagatgggcctggtgctctccttg
gagcagaccgagcggcagggggagcaccgccggctgcccccgccctccctcgaggggctg
gactccgacggggcgcttgatgacctggatgccaacgggggagacaccatcatcaacctc
agcttcgagctgcgtggccccaaagtcctggccttcctgcgccccgccaacatcagcgaa
gaggagctccagctggaccccaagcgcttctgcagccccgacctccagaagctgctgggc
cccatcttcgaccctcctggggcccagagccaagcgccagggaccctgcgggcaaggcct
ccagccgcaccgcccaagcctgctccggttgccaagaacgcttctggaggcaggagccca
gtggacccggtcgagctgccagaagagctgctttttgacatggagaacgtgcagaagctc
ttcgcttccagcaaggaggctcagtcaatggagacggccctgcaggactacgaaggcctg
gacctggagatgctggctccgtacatctcgatggacgacgacttccagctcagcagcact
gaccacccgccctggctggctgagaaacggggtggggtcctggggacggggacccggccc
acctcgccacccccacggcctcgctcgagaagtttccacggagtctccccccgcccgccc
gagcaggccactctcccccgctggggtagcgacaccagcctgagccatccccgccctgtc
cagtccccaggaagccccccatgcggagcagagcaagtggtggagatggtggcatccgtt
aagatccaggccgtgcaggatgggagcggtcagaatggccaggcggcctctgtgggtggg
aggaagagggcccgggagctgagtgtggaggaagagagagatgttttcctggaagcaggg
ctccctaagcgcacccgtggcctggagcccgatggcttcttgatgccctctcttagcctg
ggtttcctgctgagtgtggaagaatgtttggatgccaagtccgagcggggttttgggggc
accatgtccctgggcaggaagcttctgtcgctggaggagccgatgggcctcctgggggac
atgctgccatttgtggtggacggaccagccctctctcagctggccctgtttgacgccgag
gacgaggcctccgtgcagagcgggcagcattttcagctgggggaggagctcctggtggag
ctggaccaggccacctga
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