KEGG   Zootoca vivipara (common lizard): 118085947
Entry
118085947         CDS       T07275                                 
Symbol
SYMPK
Name
(RefSeq) symplekin
  KO
K06100  symplekin
Organism
zvi  Zootoca vivipara (common lizard)
Pathway
zvi03015  mRNA surveillance pathway
zvi04530  Tight junction
Brite
KEGG Orthology (KO) [BR:zvi00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    118085947 (SYMPK)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    118085947 (SYMPK)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:zvi03021]
    118085947 (SYMPK)
   03019 Messenger RNA biogenesis [BR:zvi03019]
    118085947 (SYMPK)
Transcription machinery [BR:zvi03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     118085947 (SYMPK)
Messenger RNA biogenesis [BR:zvi03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage stimulation factor (CSTF) complex
     118085947 (SYMPK)
    U7-dependent histone pre-mRNA processing factors
     118085947 (SYMPK)
SSDB
Motif
Pfam: Symplekin_C SYMPK_PTA1_N PDS5 Adaptin_N Cnd1 SR-25 INTS7_N
Other DBs
NCBI-GeneID: 118085947
NCBI-ProteinID: XP_034972981
LinkDB
Position
LG6:17494879..17513812
AA seq 1337 aa
MAGISNMGDSGLSRMSIASQFFAGEETSGIDTMTTSERVVDLLNQAALISNDSKITILKQ
VQELIINKDPTLLDNFLDEIIAFQADKSVEVRKFVIGFIEEACKRDTELLLKLIANLNML
LRDENVNVVKKAILAMTQLYKVALQWMVKSRVINDMQEACWEMVSAMTSEIIQLLDSDND
GIRTHAIKFVEALIITLSPRMPDSEVPRRHENDISLNRVPEDHPYIKYNVLWEEGKTALD
QLLKFMVHPAISSINLTAALGSLASIARQRPMFMSEVIQAYETLHANLPPTLAKSQVSSV
RKNLKLHLLSVLKHPASVEFQAQITTLLMDLGTQQAEITRNMPNLKELRKRPRDESDPAM
KKMKLEPTLGEDDEDKDLEQVAAPAPKPSIQVSTQSDTDITAEFLQPLLTPDNVANLVLI
SMVYLPENMPASFQATYTPVESAGTEVQIKHLARLMATQMTAAGLGPGVEQTKQVKESLK
EEKMLKPESVLIKRRFSALSTGQAISVLGAQQGSAPPTEPGVPQPKRRPEPIIPATQPRL
AGASGRKKIFRLSDVIKPLTDVQMDKLKVAAVKRILRSEKAVACSGAAHARVKILSSLVT
QFEVPLKSEVLTFILDDIRNRLDLAFAWLYQEYNAYLSQYPAGSLDNYDECLIGLLSGLQ
EKPDQKDGIFTKMVLEAPLITESALEVIRKYCEDESRTYLGMSTLRDLIFKRPSRQFQYL
HVLLDLSSHEKDKVRQQALLFIKRMYEKDQLREYVEKFALNYLQLLVHPNPPSVLFGADK
DTEVAAPWTEETIKQCLYLYLALLPQNHKLIHELASVYTEAIADIKRTVLRVIEQPIRGM
GMNSRELLRLVKNCPKGAETLVTRCLHSLTDKVPPSPELVTRVRDLYNKRLPDVRFLIPV
LNGLEKKEVIQALPKLIKLNPIVVKEVFNRLLGTQHGEGNSAVSPLNPGELLIALHNIDS
TKCDMKSIIKATNMCFAERNVYTSEVLAVVMQQLMEQNPLPMLLMRTVIQSLTMYPRLGG
FVMNILSRLILKQVWKYPKVWEGFIKCCQRTKPQSFQVILQLPPQQLSAVFEKCPELREP
LLAHVRSFTPHQQAHVPNSTMAILEASNKQDIEGKELQPLEEARGSAPPRTKELRREREE
EMEPQLLLPRVSQDMIALRLAQEKALKRQLEEEQKLKQQQQPPRPAAPKTPLPSEESVDL
QEEVPEVETPTIFISMQEEDESFGGDSSQLDSSLEGPWPPKELQSKERAARSRSSSSSSS
SSSSSSSSSSSSSSSDEGSSSKPPTAKQATLSLEEEEPAADGGAPPPAPSSALAANSPSP
AEELPDPIVEQEQKADS
NT seq 4014 nt   +upstreamnt  +downstreamnt
atggctggcataagcaacatgggcgactctggcctgtcccgcatgagcatcgcctcccag
ttctttgccggggaggagacgtctggcatagacaccatgactacctcggagagggtggtg
gatttgctaaatcaagctgccttaatcagcaatgattccaaaatcacaatcctcaaacag
gtccaggaattgattataaacaaagatcccacacttttggataatttcctggatgagatc
attgctttccaggcagacaaatctgttgaggttcggaagtttgtcattgggttcatagag
gaagcctgcaaacgggacaccgagctgcttctcaagcttattgctaacctcaacatgctg
ttgagggatgaaaatgtcaatgtggtgaagaaggccatcctcgccatgactcagttgtat
aaggtggcgctgcagtggatggtgaaatccagagtgatcaacgacatgcaggaggcctgc
tgggagatggtgtccgccatgaccagtgaaatcatccagctgctggactcggacaatgac
ggcatacgcacccatgccatcaagttcgtggaggcgctgatcatcaccctctctccccgg
atgccggactcggaggtgcccaggcgccatgagaacgacatcagcctcaaccgtgtcccc
gaggaccacccctacatcaaatacaacgttctgtgggaagaagggaagacagcgctggat
cagctgttgaagttcatggtccacccagctatctccagcatcaacctgaccgccgcactg
ggctccttggcctccatcgcccgccagcggcccatgttcatgtcggaggtgatccaggcc
tatgagacactgcacgccaacctccccccgacgctggccaagtcccaggtgagcagcgtg
cggaagaacctcaagctgcacctgttgagcgtcctcaagcacccagcgtccgtggagttc
caggcccagatcaccaccctgctgatggacctgggcacacagcaggccgagatcacccgc
aacatgcctaacctgaaggagctccgcaaacgcccacgggatgagagtgaccctgccatg
aagaagatgaagctggagccaactcttggggaggatgatgaggataaagacctggagcag
gtggcagccccagctcccaagccctccatccaagtcagcacacagtcggacacggacatc
accgctgagtttctacagccccttctgactccagataatgtggccaacctggtgctcatc
agcatggtatacctgcctgaaaacatgcctgcttccttccaagctacctataccccagtg
gaatctgctggcactgaggtccagatcaagcaccttgcccgcctcatggccacccagatg
acggcagctgggctagggccaggtgtggagcaaaccaagcaggtcaaggagtcgctgaaa
gaagagaaaatgctcaaaccggaaagcgtgctgatcaagcggcgcttctctgctctcagt
acaggccaggccatttctgtgttgggagcccaacaaggctctgccccccccactgagcct
ggggtgccgcagcccaagcggcgcccagaaccaatcatccctgccactcagcccaggttg
gccggtgccagcggccgcaaaaagattttccgcctgagcgacgtgatcaagcctctcacg
gatgtgcagatggacaagctgaaggtggcggccgtgaagcggatcctgcgctccgagaag
gccgtggcctgcagtggggctgcccatgcccgggtgaagatcctctcttctctggtgacc
cagtttgaggtccctctcaagagcgaagtcctgaccttcatcctggatgacatccgcaac
cgcttggacctcgcctttgcctggttgtaccaggagtacaatgcttacctgagccaatac
cccgctggctcgctcgacaactacgatgagtgtctcatcggcctgctctccggtctgcag
gagaagccggaccaaaaagatgggatctttaccaagatggtacttgaggccccactgatc
accgagagtgccctggaagtgattcggaagtattgtgaagatgagagccggacgtacctg
ggcatgtcgacacttcgggacctgatcttcaagcgcccgtcgaggcagttccagtatctg
catgttctcttggatctcagctcccacgagaaggacaaggttcgccagcaagcgctccta
ttcatcaagcggatgtacgagaaggaccagctgcgggaatatgtggagaagtttgcactt
aattatttgcagctcctggtccaccccaaccctccctctgttctctttggcgcagacaaa
gatacagaggtggctgctccctggacagaagagaccatcaagcaatgcctctatctctac
ttggccctccttccccagaaccacaaactgatccatgaactggcatctgtatacacggag
gccattgctgacatcaagcgcactgtcctcagggttattgagcagcctatccgtgggatg
gggatgaattcccgagagctgctcaggctggttaaaaactgccccaaaggtgcagagacc
ctggtgacccgctgtctgcacagcctaacggacaaagttcccccatctccagagcttgtg
acacgagttcgagatctgtacaacaagaggctcccagacgtccggttccttatccctgtc
ctcaatggtttggagaagaaagaggtgatccaggccctgccgaagctcattaagctgaat
cccattgttgtgaaggaggttttcaaccgcctcttgggaacacaacacggtgaaggcaac
tctgcagtttctcctctgaatcctggagagttgttgattgccctccacaacatcgactcc
accaagtgtgacatgaagtccatcatcaaagccaccaacatgtgctttgctgagcgcaac
gtgtacacgtctgaggtgctggccgtggtgatgcagcagctcatggagcaaaacccacta
cccatgctccttatgcggaccgtgatccagtcactgacgatgtacccacgcctgggcggc
ttcgtcatgaacatcctctcccgactcatcttgaagcaggtgtggaagtaccccaaggtc
tgggagggtttcatcaagtgctgccagcggaccaagccccagtccttccaagtcatcctc
cagttacctccccagcagctctctgccgtcttcgagaagtgcccagagctgcgggagcct
ctgctggcccatgtccgctccttcactccgcatcagcaagctcacgttcccaattccacc
atggccatcctagaagccagcaacaagcaagacattgaagggaaggagttgcagcctctg
gaggaggcgaggggctcagccccgcccaggaccaaggagctgagaagagagagagaggaa
gaaatggagcctcagctcctcctgcctcgcgtgtcccaggatatgattgccctgcgcttg
gcgcaggagaaggccctcaagcgtcagctggaggaggagcagaaactgaagcagcagcag
cagcctccccgcccagcagcccccaagaccccactcccttccgaggaatctgtggacttg
caggaggaggtgcctgaagtggagactcccaccatcttcatcagcatgcaggaggaagac
gagagctttggaggagacagctcccagctggattccagcttagagggcccctggccaccc
aaggagctgcagagcaaggaaagagcagccagaagcagaagcagcagtagcagcagcagc
agcagtagcagcagcagcagtagcagcagcagcagcagcagctcagatgagggatcctca
agcaagccacccacagccaagcaagccaccctctccctcgaggaggaggagccggctgca
gacggtggggcaccacctcctgccccttcctctgctctggctgcaaactctcccagccca
gcagaggaactgccggaccccattgtggagcaagagcagaaagcagacagctga

DBGET integrated database retrieval system