Zootoca vivipara (common lizard): 118086105
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Entry
118086105 CDS
T07275
Symbol
SAMD4B
Name
(RefSeq) protein Smaug homolog 2 isoform X1
KO
K27396
protein Smaug
Organism
zvi
Zootoca vivipara (common lizard)
Brite
KEGG Orthology (KO) [BR:
zvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zvi03019
]
118086105 (SAMD4B)
Messenger RNA biogenesis [BR:
zvi03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
118086105 (SAMD4B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
PHAT
SAM_2
Motif
Other DBs
NCBI-GeneID:
118086105
NCBI-ProteinID:
XP_034973261
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All DBs
Position
LG6:complement(14670981..14701856)
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AA seq
693 aa
AA seq
DB search
MMFRDQVGILAGWFKGWNECEQTVALLSLLKRISRTQARFLQLCLEHSLADCTEIHVLES
EANSAAVISQWHQEPKDKVVSLLLSHLPLLQPGNTDAKSEYMKLLQKVLAYSIESNLFIE
ESRQLLSYALIHPATTLDDRNSLALWLNHLEERLSSGYSGQSRGRPDTAYHSRQGSDEWQ
GPVDTGLGDLGHGWQEKPPRENGHMSFHSSGSVPSAINSIGSNANTALPCQIHPSPLKRS
MSLIPTSQQVPSEWMNVDEMGARPAFIPGGEHAPLSPQSSVASSGSEQTEEHSGSRNTFQ
EEGSGMKDVPSWLKSLRLHKYAALFSQMTYEEMMTLTEQHLESQVLHKNVTKGARHKIAL
SIQKLRERQSVLKSLEKDILEGGNLWNALQELQQIIITPIKAFHALQAMAASKEGQQQLP
AEQRGATKLCLDKSGNPSEDKDSATDTFLPPTGSPCDGESGAAPIAEGDIAGQFTRVMGK
VCTQLLVSRPDEENITSYLQLIEKCLMHEAFTETQKKRLLSWKQQVLKLLRTFPRKAVLD
MQGYRPQKGWAFGSNSLPIAGSVGVGVARRGQRQFQMPPRAIPPSRLGILSPAGIGGVSP
RHALTSPNLGSQGRQNLWFANPGGSNSMPGQSRSSVQRTHSLPVHTSPQAILMFPQDCQL
PGTDLEINPTLESLCLSMTEHALGDGTDKTSTI
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atgatgttccgggaccaggtgggcatccttgctggctggttcaaaggttggaatgaatgt
gagcagacggtggccctgctgtctctcctcaagcgtatctctcgcactcaagcccgcttt
ctgcagctgtgcctggagcactcgttggcagattgcacagagatccacgttctggagtca
gaggccaacagtgcggctgtcatcagtcagtggcaccaagagcccaaggataaagtagtc
tccctgctcctctcccacctgcctctcctccagcctggcaacacagatgccaagtccgag
tacatgaagctcttgcagaaggtgctggcctactccatcgagagcaacctcttcattgag
gagagccggcagctcctctcctacgccctcatccacccggccaccacgcttgacgaccgc
aactccctggccctgtggctcaaccacctcgaggaacgcctctccagcggctactccggc
cagagcagggggcggcccgacacggcctaccactcgcgccagggctcggacgagtggcag
ggccccgtagacacgggcctcggagacctggggcacggctggcaggagaagccaccacgg
gaaaatgggcacatgtccttccattcctctggctccgtgccgtcggccatcaacagtatc
gggagcaacgcaaacacagctctcccctgccaaatccaccccagcccgctgaagcgctcc
atgtccctcatccccaccagccagcaggtccccagcgagtggatgaacgtggacgagatg
ggcgcccggccagccttcatccccggcggggagcatgctcccctctcgccccagagcagc
gtggcctcatcaggcagcgagcagacggaggagcattctggcagtcgaaacacctttcaa
gaggagggcagcggcatgaaagatgtcccctcgtggctgaagagtcttcgcctccacaaa
tatgcagccctcttctcccagatgacctatgaagagatgatgaccctcacagagcaacac
ctggagtcgcaggtactgcacaagaacgtcaccaaaggagcgaggcacaaaattgccttg
agtatccagaagctgcgggaaaggcagagcgtcctgaagtctctggagaaggacatcttg
gaaggtgggaacttgtggaacgccctccaggaactgcagcagatcatcatcacccccatc
aaggccttccacgccctgcaggccatggcagcatccaaggagggccagcaacagctgccg
gcagagcagcgcggagccaccaagctgtgtctggacaagagtggcaacccttctgaggac
aaggactctgccaccgacaccttcctgcccccgacaggctccccttgtgatggggagtcg
ggggcggcgcccatcgccgagggggacatcgcagggcagttcacccgggtgatgggcaaa
gtgtgtacgcagttgctggtctcccgaccggacgaggagaacatcaccagctaccttcag
ctgatagagaaatgcctgatgcacgaggcattcacagagacacagaagaaaaggctcctg
tcctggaagcagcaggtgctaaagttgctccggacgtttcccaggaaggccgtgctggac
atgcaaggctaccgtccacagaaaggatgggcctttggttccaattctctccccatagct
ggatctgtgggggtgggggtggcccgcagaggacagcggcagttccagatgcccccccgc
gccattcctcccagccgcctggggatcctgagccctgcagggatcggcggagtctcccct
cggcatgctctcaccagcccaaaccttgggagccaaggacggcagaacctgtggtttgcc
aaccctgggggcagcaacagcatgccgggccagagtcgcagttctgtccagcggacccat
tcgctccccgtccacacatccccccaggccatcctcatgttcccacaggattgccagctc
cctggaacagacctggagatcaaccctacgctggagtccctgtgtctcagcatgacggag
cacgcactgggcgatggcaccgacaagacttccaccatttga
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