Zootoca vivipara (common lizard): 118086243
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Entry
118086243 CDS
T07275
Symbol
KARS1
Name
(RefSeq) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
zvi
Zootoca vivipara (common lizard)
Pathway
zvi00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
zvi00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
118086243 (KARS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
zvi01007
]
118086243 (KARS1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
zvi03016
]
118086243 (KARS1)
Enzymes [BR:
zvi01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
118086243 (KARS1)
Amino acid related enzymes [BR:
zvi01007
]
Aminoacyl-tRNA synthetase
Class II (A)
118086243 (KARS1)
Transfer RNA biogenesis [BR:
zvi03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
118086243 (KARS1)
Prokaryotic type
Other AARSs
118086243 (KARS1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-GeneID:
118086243
NCBI-ProteinID:
XP_034973528
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All DBs
Position
LG6:complement(54102622..54112093)
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AA seq
584 aa
AA seq
DB search
MAAPATTSPLDGEAEPRLSKNELKRRLKAEKKVAEKQAKQKEQGEKLPPKPAACATEDEE
NLDPNQYYKIRSQAIQQLRGTSEDPFPHKFHVDISLSDFIEKYNHLQAGDHLTDVTVRLA
GRIHAKRASGGKLIFYDLRGEGVKLQVMANSRNYKSEEEYMHINNKLRRGDIIGVQGNPG
KTKKGELSIIPYQITLLAPCLHMLPHLHFGLKDKETRFRQRYLDLILNDFVRQKFIVRAK
MITYLRSFLDELGFLEIETPMMNIIPGGAVAKPFITHHNELDMDLYMRIAPELYHKMLVV
GGIDRVYEIGRQFRNEGIDLTHNPEFTTCEFYMAYADYHDLMEITEQMLSGMVKHITGSY
KVTYHPEGPDGQSYEIDFTPPFRKISMVDELEKILGVTFPATDQFNTEETRKFFDAICEE
RGVECPPPRTTARLLDKLVGECLEVTCINPTFICDHPQIMSPLAKWHRRRQGLTERFELF
VMKKEICNAYTELNDPFLQRELFEDQAKAKSAGDDEAMFIDENFCTALEYGLPPTAGWGM
GIDRLTMFLTDSNNIKEVLLFPAMKPEEKKKDAQSNSPADGTSV
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcccgccacgacaagccctctggacggggaggccgagccccgcctcagcaag
aacgagctgaagcggcgcctgaaggccgagaagaaagtggctgagaagcaggcgaagcag
aaggagcagggagagaaactgccgccaaagcccgccgcctgcgcgactgaggacgaggaa
aacctcgaccccaaccaatactacaagatccgcagtcaggccatccagcaactgagaggc
acttctgaagatccctttccacacaagtttcatgtggatatctcactgtcagactttata
gaaaagtacaaccacctacaggcaggggatcatcttactgatgttacagtgagactagca
ggccggattcatgccaaacgagcctctggaggaaagttgatattttatgatcttcgtggg
gagggagttaagttgcaagttatggcaaactccagaaactacaaatctgaagaagaatat
atgcacattaacaacaagctccgtcgtggggacattattggggtccaagggaatcctggc
aagacaaagaaaggggaactgagcatcattccgtatcaaatcaccctcctagctccatgc
cttcacatgctacctcatcttcattttgggctgaaagacaaggaaaccagatttcggcag
agatacctggatttaattcttaatgactttgtaaggcaaaaattcatagtccgagcaaaa
atgataacataccttcgaagcttcctagatgaattgggctttttggagattgagactccc
atgatgaacatcatacctggaggggctgtggcaaaaccttttatcacccaccataatgag
ctggacatggacttgtacatgagaatagcaccagaactctaccacaagatgctagtggtt
ggcggaatagaccgggtctatgaaattgggcgccagttccggaatgaaggcattgattta
actcacaacccagaattcacaacctgtgaattttacatggcatatgcagactaccatgac
ttgatggagatcacagaacaaatgctctcagggatggtgaaacacatcactggcagctac
aaggtgacgtaccaccctgaaggcccagatggacagtcctatgagatagacttcacacca
cccttccgcaaaattagtatggtggatgagctggagaaaatattgggagtgacctttcct
gctacagatcagtttaatacagaagagactcgtaaattctttgatgctatatgtgaagag
aggggggttgaatgcccgcccccccggactacagccaggctccttgataagctggttggg
gaatgtttggaagttacgtgcattaaccccacatttatctgtgatcaccctcagatcatg
agtcctctggcaaaatggcatcgccgtcggcagggcttgacagaacgctttgagcttttt
gtgatgaagaaggagatctgcaatgcctacacagaattgaatgatccttttctgcagcgg
gagctttttgaagatcaggctaaggcaaaaagtgcaggtgatgatgaggcaatgtttatt
gacgagaacttctgcacggctctggagtacgggctcccccctacagcaggctggggcatg
ggcatcgaccgcctaaccatgttcctgactgactcaaacaacattaaggaggtgttgtta
tttccagccatgaaacctgaagaaaagaagaaagatgcacaatccaattctcctgctgat
gggacctctgtgtga
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