Zootoca vivipara (common lizard): 118086263
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Entry
118086263 CDS
T07275
Symbol
ERCC2
Name
(RefSeq) general transcription and DNA repair factor IIH helicase subunit XPD
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
zvi
Zootoca vivipara (common lizard)
Pathway
zvi03022
Basal transcription factors
zvi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
zvi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
118086263 (ERCC2)
09124 Replication and repair
03420 Nucleotide excision repair
118086263 (ERCC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
zvi03021
]
118086263 (ERCC2)
03036 Chromosome and associated proteins [BR:
zvi03036
]
118086263 (ERCC2)
03400 DNA repair and recombination proteins [BR:
zvi03400
]
118086263 (ERCC2)
Enzymes [BR:
zvi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
118086263 (ERCC2)
Transcription machinery [BR:
zvi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
118086263 (ERCC2)
Chromosome and associated proteins [BR:
zvi03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
118086263 (ERCC2)
DNA repair and recombination proteins [BR:
zvi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
118086263 (ERCC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HBB
DEAD_2
Helicase_C_2
ResIII
DEAD
SesA
SNF2-rel_dom
Motif
Other DBs
NCBI-GeneID:
118086263
NCBI-ProteinID:
XP_034973572
LinkDB
All DBs
Position
LG6:57536045..57564000
Genome browser
AA seq
760 aa
AA seq
DB search
MKLNIDGLLVYFPYDYIYPEQYSYMLELKRTLDAKGHGVLEMPSGTGKTISLLSLIVAYQ
RAYPLEVTKLIYCSRTVPEIEKVIEELRKLLDFHEKQTGHKLPFLGLALSSRKNLCIHPE
VSAFRFGKEVDGKCFSLTASYVRAQQQQDSSVPSCRFFEEFDAHGRQVPLPYGVYNLDDL
KAFGRQKGWCPYFLARYSILHANIVVYSYHYLLDPKIADLVSKELAKKSVVVFDEAHNID
NVCIDSMGVNITRKMLDRCQGNVATLQASIQKIKETDAQKLKEEYRRLVEGLREANVARE
TDVYLANPVLPDEVLQEAVPGNIRTAEHFVGFLKRFLEYLKSRLRVHHVVQESPPSFLKD
IFEKVCIERKPLRFCAERLRSLLRTLEIADISDFSPITLISNFATLVSTYSKGFTIIIEP
FDDRTPTIANPILHFSCMDASIAIKPVFERFQSVIITSGTLSPLDIYPKILDFRPVTMAT
FTMTLARTCLCPMIVGRGNDQVTISSKFETREDIAVIRNYGNLLLEMSAIVPDGIVAFFT
SYQYMENIVASWYEQGILENIQRNKLIFIETQDGAETSMALEKYQEACENGRGAILLSVA
RGKVSEGIDFVHHYGRAVIMFGVPYVYTQSRILKARLDYLRDQFQIRENDFLTFDAMRHA
AQCVGRAIRGKTDYGLMVFADKRFARADKRGKLPRWIQEHITDANLNLTVDEAVQVSKFF
LRQMAQPFRKEDQLGLSLLTFEQLQSEETLRKVQEIAHQV
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgaacatagatggactgcttgtttatttcccctatgattacatctacccggag
cagtattcttacatgctggagctgaagaggacattggatgccaagggtcatggcgttctg
gaaatgccatcgggcaccgggaagaccatctccctcctgtctctgattgtggcctaccag
cgggcttatcccctggaagtgaccaagctcatttactgctcccgaacggtgccagagatt
gaaaaggtcatcgaggaactgcgcaaactcctggatttccacgagaagcagacgggacac
aagctgcccttcttgggcttggctcttagctccaggaagaacctctgcatccacccggag
gtgagcgcctttcgcttcgggaaggaggtggacgggaagtgcttcagcctgactgcttcc
tacgtccgggctcagcagcagcaagacagcagcgtcccctcttgccgcttctttgaggaa
tttgatgcccacgggcggcaggtgcccctcccatacggcgtgtacaatctcgacgacttg
aaggccttcggtcgccagaaaggatggtgcccttacttccttgcacgatactcgatcctt
catgccaacattgtggtgtacagctaccactatctcctggaccccaagatcgccgacctg
gtctctaaagagctggccaagaaatccgtcgttgtcttcgatgaggctcacaatattgac
aacgtctgcatcgattccatgggtgtcaacatcacacgcaagatgctggaccggtgccag
gggaacgtggccacgctccaagccagcatccagaagatcaaggagacggatgctcagaag
ctgaaggaggaataccgacgcctggtggaaggtttgcgggaggcgaatgtcgcccgcgaa
acggacgtctatttggccaacccggtgctgcccgacgaggtcctgcaagaggccgtcccg
ggcaacatccggactgcagagcactttgtgggcttcctgaaacgcttcctggagtacttg
aagtcccgcttgcgggtgcatcacgttgtccaggaaagccccccgtcgttcctgaaggac
atctttgagaaggtctgcattgagcgcaagccccttcgattctgtgcagagcgactccgc
tcccttcttcgaacgctggaaatcgccgacatctccgatttctcccccatcacgctgatt
tccaatttcgccaccctggtcagcacttactccaaaggttttactataatcattgaaccg
tttgatgaccgaactcccactatcgccaaccccatcttgcacttcagctgcatggacgcc
tccatcgctatcaagccggtctttgagaggttccagtcggtcattatcacctcaggaacc
ctttcgccgctggacatctaccccaaaatcctggacttcaggcctgtcaccatggcaacg
ttcaccatgaccctcgccaggacctgcctttgcccgatgattgtggggagagggaacgac
caggtgaccatcagttccaagttcgagactcgcgaagacattgccgtgatccgcaactac
gggaatctgctgctggagatgtcagccatcgtcccggacggcatcgtggcctttttcacc
agctaccagtacatggagaacattgtggcctcgtggtatgagcaggggatcctggagaac
atccagcgcaacaaactcatattcatcgagacgcaggatggagcggagacgagcatggcc
cttgagaagtaccaggaggcctgcgaaaatggacggggcgccattttactgtctgtggcc
agggggaaggtctctgaagggatcgactttgtccaccactacgggagagctgtgatcatg
tttggcgtgccctacgtctacacccagagccgaatcctgaaggcccgtctagactacctg
cgggaccagtttcagatccgcgaaaacgacttcctgaccttcgacgccatgcgccacgcg
gcccagtgcgtggggagagccattcgcggcaagactgactacgggctgatggtcttcgct
gacaagcgctttgcccgggcggacaagcggggcaagctcccccgctggatccaggagcac
atcactgacgccaacctcaacttgacggtggacgaggccgtgcaggtgtccaagttcttc
ttgcggcaaatggcccagccgttccgcaaggaggaccagctgggtctgtctctcctcacc
ttcgagcagctgcagtcggaggagacgctacgcaaggtgcaggaaattgcccaccaggtg
tga
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