Zootoca vivipara (common lizard): 118086377
Help
Entry
118086377 CDS
T07275
Symbol
PRDM2
Name
(RefSeq) PR domain zinc finger protein 2 isoform X1
KO
K11432
[histone H3]-lysine9 N-trimethyltransferase PRDM2 [EC:
2.1.1.355
]
Organism
zvi
Zootoca vivipara (common lizard)
Pathway
zvi00310
Lysine degradation
zvi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
zvi00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
118086377 (PRDM2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zvi03000
]
118086377 (PRDM2)
03036 Chromosome and associated proteins [BR:
zvi03036
]
118086377 (PRDM2)
Enzymes [BR:
zvi01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.355 [histone H3]-lysine9 N-trimethyltransferase
118086377 (PRDM2)
Transcription factors [BR:
zvi03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
118086377 (PRDM2)
Chromosome and associated proteins [BR:
zvi03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
118086377 (PRDM2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2
zf-C2H2_4
SET
zf-C2H2_6
zf-C2H2_ZNF462_1st
zf-C2H2_11
zf-H2C2_2
zf-C2HE
Motif
Other DBs
NCBI-GeneID:
118086377
NCBI-ProteinID:
XP_034973805
LinkDB
All DBs
Position
LG6:complement(74020115..74068130)
Genome browser
AA seq
1684 aa
AA seq
DB search
MYLFRTQQDFRMNQNSTEPSVSVETLADVPEHVLKGLPEEVRLLPSAVDKTRLGVWATKP
IFRGRKFGPFAGDKKKRSQVKSNVYMWEVYYPNLGWMCVDATDPEKGNWLRYVNWARSGK
EQNLFPLEINRTIYYKTLKPIEPGEELLVWYNGEDNPEIAAAIEEERASNRSKRNSPKTK
KGKKKSQEAKNKGKNAADKKQKTVLDSTSADMREPKEGHKQEDETPSVSAVLSLEQTAVI
QEMVNQDTLPNLVIPSPVSGPHPVPEDKPEAVTCGSNVLEEEPEEDGEDPEEDTGGEEEE
EDDEDEEDEPEEEEEDVSFPKGSPDMEAMPICEDKLESVEEQSSISEDSPESSPKKKAVA
KFPKARDESNGNIHGTFMFPCQHCERKFTTKQGLERHMHIHISAISHAFKCRYCGKAFGT
QINRRRHERRHEAGPKRKPFPALSEGNAKNQTIPEDNIKDETNSRQDLVAVETEKVSLEM
PNPVLFEESKGPKELHPCKYCRKVFGTHTNMRRHQRRVHERHLIPKGVRRKPEEPQFPAE
KTQQSSNVYVASTDLEEEGEADDVYIMDVSSNISENLNYYIDGKIQSNSSTSNCEVIEVE
SSSTELYGVNCLLSPVTVEIPPSVKATSVHLNDIPKESPVSGSAEPKKRRTASPPLLPKI
KTEVDPEPITSLCSLTIPLTISAADNLPFPKEKSIYLSSKLKQLLQTQDGSTVAPSPPSS
SSSSTEIPKLGLTATSSPLLPAASSRFKRRTSSPPSSPQHSPALRDFGKAGEGKPVWNDA
TLGSKIAKLESHSNSPVWSLSGREEKEAMSPLCLEEYKVSKDWTPSPPFGNVCNQQPLDL
SSSMKQRSNCKNRTQAPWESVLDLSVHKKACSDTEAKESNSAPPACSGVKKKPTTSMLQK
VLLNEYNGTDSSSENPAAETNPSQGACKTEEHPEPESRASLPVPEVESGSLCSSPEIPLL
PSSTASSSQVPPLLTPTNSPSPPPCPPMLKVPTPPPPLLPTVPSPLPEEPTSITPSSCPS
PLSNTTAQSPLPILSPTVSTSPVPSVGPLSCPSPGPPNLSSSSLSFSSSSSSPLSSSSPS
PPPLSVVSSVLSPGDNLENSVPIISFKQEEVESECEKPREDPHSSSEANTIQETFNKSFV
CNVCESPFLSIKDLTKHSSVHAEEWPFKCEFCVQLFREKTDLSEHRFLLHGVENIFVCSV
CKKEFAFLCNLQQHQRDLHPDKECTHHEFESGTLRPQNFTDPSKAKTEHMQLLPEDSSEP
AKEEEEEELNDSSEELYTTIKIMASGVKSKDPDVRMGLNQHYPSFKPPPFQYHHRNPNGI
GTTATNFTTHNIPQTFTTAIRCTKCGKSVDNMPELHKHILACASASDKKRYTPKKNPVPL
KQTVRPKNGVILPSPTSNAFRRVGQPKRLNFSVEVGRMSSNKLKISALKKKNQLVQKAIL
QKKKSQQKAELRNSTAEPSAHICPYCNREFTYIGSLNKHASYSCPKKPISPSSKKNSKKK
SGASSSSGDKASNRRRTADAEIKMQSTQAHLGKTRARSSGPLPLPLPSASFKLKQNIKFV
PPGRSKKPSSLSAARNASPIRMAKMIPGEGKKVKGVAKSSPPGLSSKASRKLHVRIQRSK
VALASKSAVANKKKADRFSMKSRERVGGPVTRSVQQASSSDAPESSKREETSTRQELKDF
RNLL
NT seq
5055 nt
NT seq
+upstream
nt +downstream
nt
atgtatcttttcagaacacaacaggatttcagaatgaatcagaactcaacggagccttca
gtatcagttgagactttggctgacgtacctgagcacgtgcttaaaggacttcctgaggaa
gtgagacttctcccatctgctgttgacaagacacggcttggtgtctgggcaacaaagcca
attttcagaggcagaaagtttggtccatttgctggtgacaagaagaaacgatctcaggtt
aaaagcaatgtgtacatgtgggaggtctattacccaaacttgggatggatgtgtgttgat
gccacagatccagagaaggggaactggctgcgctatgtgaactgggctcgctcaggaaag
gagcagaacctattccctttggagatcaacagaaccatctactacaaaactttaaagcca
attgagccaggcgaggagctcctggtgtggtacaatggggaagacaacccagagatagca
gctgctatcgaagaggagagagccagcaatcgcagcaagaggaactctccgaaaaccaag
aaagggaagaaaaaatcccaggaggctaaaaacaaaggaaagaacgcagccgataaaaag
cagaaaactgttttggattcaacttctgccgacatgagggagcctaaggaaggccataaa
caggaggatgaaactccctctgtttcagcagtgctgtccctggagcagacagctgtgatc
caggagatggtaaatcaagacacacttccaaacttggttatccccagtccggtcagtggg
ccccatccggtgcctgaagacaaaccggaagcagtaacgtgtggctcgaatgttttagag
gaggagccagaagaggatggggaggaccctgaggaggatacagggggggaggaagaagag
gaggacgacgaggacgaagaggatgaacctgaggaggaagaggaagatgtcagcttccct
aaaggaagtcctgacatggaagccatgcccatatgtgaagacaagctggaatctgtggaa
gagcagagcagcatatctgaagactcgccagaaagctcccccaagaaaaaggctgtggcg
aaattccccaaagcgagagacgaatctaatgggaatatccacggtacgttcatgtttcca
tgtcaacattgtgaaaggaaatttaccacaaagcagggtctcgaacgccatatgcatatc
catatctcggcaatcagtcacgctttcaaatgccgctattgcggcaaagctttcggcacc
cagattaaccggcggaggcatgaacggcgccatgaggccggaccgaaaaggaagcccttc
ccagcgctgtcggaaggcaacgctaagaaccaaacaattcctgaagataatattaaagat
gaaaccaacagcaggcaggacttagtagctgtggaaactgagaaagtttctctcgaaatg
ccaaatcctgttctctttgaagagagcaagggacccaaagagctgcacccgtgcaaatat
tgcaggaaggtttttggcacccataccaatatgcgaaggcaccagcgaagggtccatgag
cgccatctcatccccaaaggtgtcaggagaaaacccgaggagccccagtttccagcagag
aaaacccagcagtcctcaaatgtgtacgtagcaagcacagacctcgaagaggagggagag
gcagatgatgtgtacattatggatgtttccagcaatatatctgaaaatctcaattattac
attgatggtaagattcagtccaacagtagcacgagcaattgtgaagtgatagaggtggaa
tccagctcgacagaactctatggagtaaactgtttactgagtccagtgactgtggaaata
cccccaagtgtaaaggctacatcagtgcacctaaacgacataccaaaagagtcaccagtc
agtggaagcgccgaacccaaaaagaggaggaccgcaagtcctcctcttctgcctaagata
aaaactgaagtggatccggaacccatcacatcattgtgttctttgactattcctcttact
atatcagcagccgataacttgcctttccccaaagagaaaagtatttatttatcatcaaag
ctgaaacagcttctccagacacaggatgggagtacggtagcgccatctcccccatcgtcg
tcgtcgtcctcaaccgaaatccccaaactgggactcacagctacatcttcgcctcttctg
cccgccgcctccagcaggttcaaacgaaggaccagttcccctcccagttcaccgcaacac
agtccagctctacgagactttggcaaagcaggtgaggggaaacctgtttggaatgatgcg
actctgggctcaaagattgccaagctagagagtcatagcaattctcctgtatggagtttg
tctgggagagaagaaaaagaggcaatgagccctctttgcttggaagagtataaagtatcg
aaggactggacgccaagtcctcctttcggcaatgtgtgcaaccagcagcctttggactta
tccagtagcatgaagcaaaggtccaactgcaagaacaggactcaggccccctgggaatca
gtgttggatctcagtgtccataaaaaggcatgcagtgacactgaagccaaggagagtaac
tcggcgccaccagcatgtagtggtgtcaagaagaagccaaccacatccatgctgcagaaa
gtgcttctgaatgaatataacgggactgattcatcttctgaaaaccctgcagctgaaacg
aacccaagccagggtgcttgcaaaacagaagagcatccagagccagagtccagggctagc
ctccctgttccagaggtcgagtcaggttccctgtgctcttctcctgagatacctttactg
ccatcatctactgcatcttcaagtcaggtgccgcctctcctgactccaacaaactctcct
tcccctccaccttgcccgcctatgttaaaggttcccactcctccaccacctctcctgcct
actgttccctctccgctcccagaggagcccacaagcatcactccaagttcatgtccttct
cccttatcaaataccactgctcagtcccctcttccaatcctttcccctacggtctcaacg
tctcctgttccttcagtaggacctcttagttgtccttcccctggacctcccaacctctct
tcctcctccttgtccttttcttcctcctcttcttcgccattgtcatcctcatctccttct
ccacctccactctcggtagtctcttctgtcctttcccctggtgataacctggaaaactca
gtccctattatctcttttaagcaggaagaggtagagagtgagtgtgaaaagccaagggaa
gacccacacagttccagcgaagctaataccatccaggagacatttaataagagctttgtg
tgcaatgtctgtgagtccccttttctttccattaaagatctcaccaaacattcatctgtt
catgctgaagaatggcccttcaaatgtgagttctgtgtccaactcttccgagagaaaaca
gatttgtcagaacaccgcttcttgctccatggcgttgagaacatctttgtgtgctccgtc
tgcaagaaagaatttgcttttctatgcaatttgcagcagcaccagcgggacctccacccg
gacaaagagtgcacacaccacgagtttgaaagcgggactctccggccgcagaacttcaca
gatcccagtaaggctaagaccgaacacatgcagctcctgcctgaagactcctcagaacct
gctaaggaggaagaagaggaagagctgaatgactcctcggaagagctttatacaactatc
aaaataatggcttctggggtcaagtcaaaagatccagatgtccgcatgggcctcaatcag
cactacccaagttttaagccccctccattccagtatcaccaccgcaatcctaacgggatt
ggaaccactgccacaaatttcacaacccacaatatcccacagaccttcaccactgccatt
cgctgcacaaagtgtgggaaaagtgtagacaacatgcctgaattgcacaagcatatcttg
gcttgcgcttctgccagcgacaaaaaacggtatacaccgaagaagaaccccgtgccgtta
aaacagaccgttcgccctaagaatggtgtcatcctccccagccccacgagcaacgcgttc
aggcgtgtgggccagcctaagaggctcaactttagcgtcgaggtgggccggatgtcttct
aacaagctcaaaatcagtgcattaaagaagaaaaaccagcttgtccagaaagccattttg
caaaagaagaaatctcagcagaaggcagagttgaggaacagcacagcggagcccagcgct
cacatctgcccttattgcaaccgggaattcacctacattgggagtctgaacaagcatgct
tcctacagctgtcccaaaaagcctatttccccttcctctaagaagaactctaaaaagaaa
agcggggcatcctcttccagtggtgataaagctagcaatcggcggcggacagcagacgcc
gagataaaaatgcaaagcacgcaggctcacctaggcaagacgcgagcccggagctccggg
cccctgccactgccgctgccatctgcatccttcaaactgaaacaaaacatcaaatttgtg
ccgcccggtagatccaaaaagccgagcagcttgtcggcagcaaggaacgccagccccata
agaatggccaagatgattccaggagagggcaagaaagtgaaaggggtggccaagagcagc
cctcccgggctctcgagcaaagcatcccgcaagttgcatgtcaggatacagaggagcaaa
gtggccttggctagcaagtcagctgtggcaaacaagaaaaaggcggacagattcagcatg
aagtcgagagaaagggttggcggccccgtcacccggagtgtgcagcaggcaagcagctcc
gatgccccagagagcagcaagagggaagaaaccagcacacggcaagagctgaaagatttc
aggaacctcctgtga
DBGET
integrated database retrieval system
