Zootoca vivipara (common lizard): 118086420
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Entry
118086420 CDS
T07275
Symbol
USB1
Name
(RefSeq) U6 snRNA phosphodiesterase isoform X1
KO
K23093
U6 snRNA phosphodiesterase [EC:3.1.4.-]
Organism
zvi
Zootoca vivipara (common lizard)
Brite
KEGG Orthology (KO) [BR:
zvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
zvi03041
]
118086420 (USB1)
Spliceosome [BR:
zvi03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Other proteins involved in snRNP biogenesis
118086420 (USB1)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
HVSL
2_5_RNA_ligase2
Motif
Other DBs
NCBI-GeneID:
118086420
NCBI-ProteinID:
XP_034973899
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Position
LG6:44634512..44642954
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AA seq
324 aa
AA seq
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MATAGWHQPEFCNRCSLKEALLRMRSGPSSSVGGGSGDPNVSAMSRVAAVAGLVGYSSSD
SEDEDASSGAQGEGGEAGGASSAEGRQGRRSPGDSSTAHRLPVPDSVLSMFRDQEEAETV
VDDSSKHGGRLRTFPHERGNWATHVYVPYEAQEDFLELLQLLLLRACASVPSLTAMAEFH
ISLSQGVILRHHWISPVVQSLKEHLASFPRFTCRADRVTIYTNEPKSRTFIGLEVTSGHT
QLLELVSEVDRVMEEFSLPSFYKNPSFHLSLAWCVGNLSEELESCLQELQEIVNGFEDSS
YLVRIPGAEVRCKSGKKIFSFPLR
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atggccactgccgggtggcaccagcctgagttctgcaaccgttgctcattaaaagaggcg
cttctgcgcatgcgtagtggaccttcttcctccgtaggcggcggaagtggtgatcctaac
gtgtcggccatgagtagagtggcggcggtcgcaggtctggtgggctacagcagctccgac
tcggaagacgaggacgcatcctcgggagcgcaaggggaaggcggcgaggccggcggcgca
agctcggcggagggacgccaaggacgccgctctcctggcgacagctcaacagctcatcgc
cttcctgtgccagacagtgtgctaagtatgttcagagatcaggaggaggcagagacagtg
gtggacgacagcagcaagcatggaggccgcctgcggacctttccccatgagcgaggcaac
tgggcaacacatgtctacgtgccttatgaggctcaggaggacttcctcgagctgctccag
ctcctcctcctgcgtgcatgtgcatccgtgccatcgctgacggctatggcagagtttcac
atcagcctttctcagggtgtgatcctgcgccaccactggataagtcctgttgtccagtcc
ctcaaggaacacctggcttccttccccaggttcacctgtagagcagatcgagtgacgatt
tacaccaatgagcccaaaagcaggaccttcattggcttggaggtaacttctgggcatact
cagctcttggagttggtttctgaagtggacagagttatggaggaattcagtctcccttct
ttctacaagaatccctcattccatctcagcctcgcgtggtgtgttggaaacctttctgaa
gaacttgaaagttgtcttcaggagttgcaggagattgtgaatgggtttgaggactcttca
taccttgtgcgaattcctggggccgaagtccgttgcaagtctggcaagaagatcttctcc
ttccctttacggtag
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