Zootoca vivipara (common lizard): 118086437
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Entry
118086437 CDS
T07275
Name
(RefSeq) ATP-dependent RNA helicase DDX19B
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
zvi
Zootoca vivipara (common lizard)
Pathway
zvi03013
Nucleocytoplasmic transport
zvi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
zvi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
118086437
03015 mRNA surveillance pathway
118086437
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zvi03019
]
118086437
Enzymes [BR:
zvi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
118086437
Messenger RNA biogenesis [BR:
zvi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
118086437
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
Motif
Other DBs
NCBI-GeneID:
118086437
NCBI-ProteinID:
XP_034973930
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All DBs
Position
LG6:73387818..73411765
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AA seq
479 aa
AA seq
DB search
MATDSWALAVDEQEAAAESMSNLHLKEEKSKPDSNGAVLKTDDNTEKNEEEEKEDRAAQS
LLNKLIRSNLVDNTNQVEVLQRDPTSPLYSVKSFEELRLKPQLLQGVYALGFNRPSKIQE
NALPMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSRVEPEHRYPQCLCLSPTYELALQTGK
VIEQMGRFYPELKLAYAVRGNKLERGQKIAEQIVIGTPGTVLDWCSKLKFIDPKKIKVFV
LDEADVMIATQGHQDQSIRIQRMLPKDCQMLLFSATFEDSVWKFAQKVVPDPNIIKLKRE
EETLDTIKQYYVLCNSREEKFHALCNIYGAITIAQAMIFCHTRKTAGWLAGELSKEGHQV
ALLSGEMMVEQRAAVIDRFREGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDN
ETYLHRIGRTGRFGKRGLAINMVDSKHSLNILNRIQEHFNKKIHKLDTDDLDEIEKIAN
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggattcctgggctctggcggtggacgagcaggaagcggcggcggagtcgatg
agcaacttgcacctgaaggaagagaaatccaagccagactctaatggagcagttctcaag
acagatgacaatacggagaagaatgaagaggaggaaaaagaggaccgagccgcccagtcg
ttgctcaacaagcttatccgcagcaacctggtggacaacacgaaccaagtggaggttttg
cagagagatcctacgtcgcccctctactccgtgaagtcttttgaggagctgcggctgaag
ccacagctgctgcagggtgtctacgccttgggtttcaacagaccatccaaaatccaagag
aacgccttgcccatgatgctggcagaacctccacagaacctgattgcacagtcccagtct
ggtaccggtaagacggcagcttttgtcttggcgatgcttagcagagtggagccggagcac
agatacccccagtgtctctgcctctctccaacctacgagctggctcttcagacagggaag
gtgattgagcagatgggcaggttttatccagagctaaagctggcctacgcggttcgaggc
aacaaactggagcgtggccagaagattgctgagcagattgtcattggcacgcctggcacc
gtcctggattggtgctccaagctgaaattcattgaccccaagaagatcaaagtctttgtc
ttggatgaggccgatgtcatgatagccacccaaggtcaccaggatcagagcatccgcatc
cagaggatgcttcccaaagactgccagatgctgctcttctcagccacgtttgaagactct
gtgtggaagtttgcccagaaagttgtccccgaccccaacatcatcaagctgaagcgggag
gaggagactctggacaccatcaagcagtattacgtcctgtgcaacagccgcgaggagaaa
ttccatgccctctgcaacatctatggcgccatcacaattgcgcaagccatgatcttttgc
catactcgcaaaacagctggctggctagccggggagctgtccaaggagggtcaccaggtg
gctctcttgagtggcgagatgatggtggagcagcgtgccgcagtgatcgatcgcttccgg
gagggcaaggagaaagtgttggtgactacgaatgtctgtgcccgagggatcgacgtggag
caggtctccgtcgtcatcaactttgaccttccagtggataaagacgggaatccagacaat
gagacatatcttcaccgcattggccgcacaggacgttttggcaagcggggcctggccatc
aacatggtggacagcaagcacagtttgaacatcctcaacaggatccaggaacatttcaac
aagaaaattcacaagctggatacagacgatttggatgaaattgagaaaatagcaaattga
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