Zootoca vivipara (common lizard): 118086511
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Entry
118086511 CDS
T07275
Symbol
SRRM1
Name
(RefSeq) serine/arginine repetitive matrix protein 1 isoform X1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
zvi
Zootoca vivipara (common lizard)
Pathway
zvi03013
Nucleocytoplasmic transport
zvi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
zvi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
118086511 (SRRM1)
03015 mRNA surveillance pathway
118086511 (SRRM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zvi03019
]
118086511 (SRRM1)
03041 Spliceosome [BR:
zvi03041
]
118086511 (SRRM1)
Messenger RNA biogenesis [BR:
zvi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
118086511 (SRRM1)
Spliceosome [BR:
zvi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
118086511 (SRRM1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
118086511
NCBI-ProteinID:
XP_034974073
LinkDB
All DBs
Position
LG6:complement(34690860..34718663)
Genome browser
AA seq
904 aa
AA seq
DB search
MDAGFFRGTSAEQDNRFSNKQKKLLKQLKFAECLEKKVDMGKVNLEVIKPWITKRVTEIL
GFEDDVVIEFIFNQLEVKNPDSKMMQINLTGFLNGKNAREFMGELWPLLLSAQENIAGIP
SAFLELKKEEIKQRQIEQEKLASMKKQDEDKDKRDKEDKENREKRERSRSPRRRKSRSPS
PRRRSSPIRKERKHSHSRSPHHKTKSRSVTPAPEKKEETPEPEPSIKIKETLIQEATSTS
DILKVPKIEPVPDIKEPSPERISKKEREKEKEKNRQRTPSRSKSRSKSRSRSASHSRPRR
RHRSRSRSYSPRRRPSPRRRPSPRRRTPPRRIPPPPRHRRSRSPVRRRRRSSASLSGSSS
SSSSSRSRSPPKKPPKRVVSSPPRKTRRLSPSASPPRRRHRPSPPLTPPPKPRRSPTPQQ
SNRARKGRGSVSPSRTSAPKRKSIEKRESPSPAPKPRKVELSESEEDKGGKMAAADSVQQ
RRQYRRQNQQSSSDSGSSSSSEEERPKKSNVKNGEVGRRRRHSHSRSPSPSPRKWQKDSS
PRMQMGKRWQLPIDKSRRRRSPSPLPTRRRRSPSPAPPPRRRRSPSLPRRRSPSPPPRRH
SPTPRRYSPPIQRRYSPSPPPKRRTASPPPKRRASPSPQPKLRVSRSPPPKQRSSPPPKR
RSPSISSKHRKGSPPSRSNREARSPLQNKRHSPSPQPRPSRPSASPPLLRRGPSSSPQRR
HSPSPSTRPIRRVSRTPEPKKSKKVSTPSPHSVRRGSSSRSVSGSPEPPPKKHPVPPSPA
RSRSPSAHWSPPAPAKKAKSPTPSPSPVRNSDQEGGGKKKKKKKDKKHKKDKKHKKHKKH
KKEKAAVAAAMTVFTTSAQEDQEKNMEPQKETESEAEDNLDDLEKHLREKALRSMRKAQA
SPPS
NT seq
2715 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgggattcttccgcggaactagcgcagaacaggacaaccgcttcagcaacaag
cagaagaagctactaaaacaactgaaatttgcagaatgtctagaaaagaaagtggacatg
ggcaaagtaaacctggaagtaatcaagccatggataacaaaaagagtaacggaaatcctt
ggatttgaagatgatgtagtaattgaatttatattcaaccagttggaagtgaagaatcca
gattccaaaatgatgcaaatcaacctgactggattcttgaatgggaaaaatgctagagag
ttcatgggagaactgtggccactactgttaagtgcacaagaaaacattgctggtattcca
tctgctttcctggagctgaagaaagaagaaataaaacagagacagattgaacaggaaaaa
ttggcttccatgaagaaacaagatgaagacaaggataagagagacaaggaagataaagaa
aatagagaaaagagggagcgatcccgaagtcctagaaggcgcaaatcaaggtctccttcc
cctagaagacgctcatcccctatcaggaaagagagaaaacacagccattcccgatcccca
caccataaaacaaagagtcgtagtgttactcctgcaccagaaaagaaagaagagacccct
gagccagaaccttcaatcaaaataaaagaaacattgattcaggaggccacatctactagt
gatattttgaaagttcccaaaatcgagcctgtgccagatatcaaggagccatctccagaa
agaatttcaaaaaaggaaagggagaaagaaaaggagaagaatcgtcaaaggactccttcc
cgatccaagtcaaggtcaaagtctcgctcacggtctgcatctcattcaagaccaagaagg
cgtcatagatcacgatccaggtcttactcaccaagaaggcggcctagcccaagacgacgc
ccatctcctcggagaagaaccccgccgagacgcattccacctccacccaggcacagaagg
agtagatctcctgtgagacggaggagaagatcgtcagcatctttgtcaggaagtagttcc
tcctcctcctcttcacgttcccgatctccaccaaagaaaccacctaagagagttgtctcc
agccctcctcgtaagacacgtagactgtcaccttcagcaagtcctcctaggcgaaggcac
cgcccctccccacccctaactccacccccaaagccccgccgatctccgacacctcagcaa
tcgaaccgtgcaagaaaaggccgaggctcagtttctcccagtagaacctcagcacccaaa
cgtaaaagtattgaaaaaagggaatctccctcaccagcaccgaaacctagaaaagtagaa
ttgtcagaatcggaagaagacaaaggtggtaaaatggcagctgcagattctgtgcaacaa
agacggcagtatagaaggcagaaccagcagtcttcatctgattctggttcatcgtcatct
tctgaagaagaacggccaaaaaagtcaaacgtaaagaatggtgaagtgggtagacgccgg
cgacactcgcattcccgtagcccttctccatctccacgaaagtggcaaaaagattcttcc
cctcggatgcagatgggaaagaggtggcagttgccaattgataaaagtaggaggaggcgc
agtccatcgccactgcctacaagaagacgacgctctccttcccctgcccctcctccaaga
cggcgtaggtcaccttcattaccacgccgaaggtctccatcaccaccacctcgccggcac
tctcccacacccagaagatattctcctccaatacaaagaagatactctccttcaccccct
ccaaagagaaggacggcttctcctcctcccaaacgaagggcatccccttctccgcagcct
aagcttagagtctcccgttctccaccaccaaaacaaagaagttctccacccccaaagaga
cgctcgccatcaatatcctccaagcacaggaaaggatctccgcccagcaggtccaaccgt
gaagcccgttcccctctgcagaacaaacggcattctccttcgccacagcctaggccttcc
cgtccttctgcaagtcccccgctgctgcgccggggaccttcatcttctccccagcgaagg
cattctccatcaccaagcactaggcccatcagaagagtctcgagaaccccagagccgaaa
aagtctaagaaggtttccacaccaagtccacattctgtgagaaggggatcttcatccagg
tctgtttcaggatctcctgagccacctcccaagaagcatccagtgcctccatctcctgct
cgatctcgatcaccttctgctcactggtcgccaccagcacctgcaaagaaggctaaaagt
cctacaccaagtccatcaccagtaaggaattctgatcaggaagggggtggcaagaagaag
aagaaaaagaaggataagaagcataaaaaggataaaaagcacaagaagcataagaagcat
aagaaagagaaggctgcagttgctgctgcaatgactgtttttaccacatctgcacaggaa
gaccaggagaaaaatatggagccccaaaaggagactgagagtgaagcagaagataacctg
gatgacttggaaaagcatctgcgtgagaaggctctgaggtcaatgaggaaggcgcaagcg
tctccaccatcttag
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