Zootoca vivipara (common lizard): 118086541
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Entry
118086541 CDS
T07275
Symbol
SDC3
Name
(RefSeq) syndecan-3 isoform X1
KO
K16337
syndecan 3
Organism
zvi
Zootoca vivipara (common lizard)
Pathway
zvi04514
Cell adhesion molecules
zvi04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
zvi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
118086541 (SDC3)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
118086541 (SDC3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
zvi00535
]
118086541 (SDC3)
Proteoglycans [BR:
zvi00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
118086541 (SDC3)
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GFIT
Motif
Pfam:
Syndecan
Motif
Other DBs
NCBI-GeneID:
118086541
NCBI-ProteinID:
XP_034974165
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Position
LG6:28941725..29045153
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AA seq
419 aa
AA seq
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MKEMPRLLPSRPRRQGGLLLPLLLLLLLDGHVARAQHWRNENYERPIDLEGSGDDDSFED
EEMDEVEELYSGSGSGYFEQDSGIKTVVRLNTDAPLTLPTTAPVLPATSVQPVATPFAPF
PVEEATSDPVTSSLYIPRMTEEPAVTIRKALGTTASTVALDAAATASTIATTTATTAATT
TTSATMPMSKPTTVLRVLPPFITIVATTQSITLETPTTATEVARTELNTAPLVTTGVTKS
RAVPKPSTSREPDRSERTPTLPQPSSSTAPTAPVQGEPLGATPSTAMNNELEVPVSGDFE
IREEEEVAAQTELSNEVVALVTPAAGPVLRKNAEPGLVDNTIESGNSAAQLPQKNILERK
EVLIAVIVGGVVGALFAAFLVMLLIYRMKKKDEGSYTLEEPKQASVTYQKPDKQEEFYA
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgaaggagatgcctcggctgctgccgtcgaggccccgccgacagggagggctcctgctg
ccgctcttgctgctcctgctcctggacggccacgtcgcccgggcccagcactggcggaat
gaaaattatgagaggcccattgacctggaaggctctggagatgatgactcctttgaggac
gaagaaatggatgaagtcgaggaactctactcaggctctggctcaggatattttgagcag
gactctgggatcaagaccgttgtgcggctcaacaccgatgcacccctcaccctacctaca
actgcccctgtgttgcctgccacctctgtgcagccagtagccaccccctttgcgccattc
cctgtggaggaagccacctctgatccagtaacgagcagcctctacatccccaggatgacc
gaagaaccggcagtcaccatccggaaagcgctcggtaccactgctagcaccgtggccctt
gatgccgctgctaccgctagtactattgctaccaccaccgccacaactgctgccaccacc
accacctctgctacgatgcccatgtccaagccaacgactgtcctgagagtcctgcccccc
tttatcaccattgtagccacgacgcagtcgatcacacttgaaacgccaaccacggccacc
gaagttgccaggacggaactgaacacagctccgctggtgaccaccggcgtgacgaagagc
agggctgtgccgaagccaagcacttctcgggagccagaccgcagtgagaggactcccaca
ctgccccaaccctcaagttctacagcacctacagcaccagtccagggagagcctctgggt
gcgaccccttccacggcaatgaataacgaactggaagttcccgtcagcggggactttgaa
atccgtgaggaggaggaggtggcagctcagacggagctcagcaatgaagtggttgccctg
gttaccccagcagccgggccggtgctgaggaagaatgctgagccggggcttgtagacaat
acaatagaatccgggaactcggctgcgcagctcccccagaaaaacatcctggaaaggaaa
gaggtcctcatagccgtgattgtgggcggggtcgttggagctctctttgctgccttcctg
gtgatgctgctaatctaccggatgaaaaagaaggacgaggggagctataccttggaggag
ccaaagcaggcgagtgtcacgtaccaaaaacccgacaagcaggaggaattctatgcataa
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