Zootoca vivipara (common lizard): 118086810
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Entry
118086810 CDS
T07275
Symbol
CHD5
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 5
KO
K14435
chromodomain-helicase-DNA-binding protein 5 [EC:5.6.2.-]
Organism
zvi
Zootoca vivipara (common lizard)
Brite
KEGG Orthology (KO) [BR:
zvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
zvi03036
]
118086810 (CHD5)
Chromosome and associated proteins [BR:
zvi03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
118086810 (CHD5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDCT2
CHDII_SANT-like
Helicase_C
CHDNT
PHD
DUF1087
Chromo
PHD-1st_NSD
HDA2-3
ResIII
PHDvar_NSD
HTH_CHD1_Hrp3
DEAD
PHD_2
AAA_22
Phage_tail_T
Motif
Other DBs
NCBI-GeneID:
118086810
NCBI-ProteinID:
XP_034974693
LinkDB
All DBs
Position
LG6:complement(71639067..71704199)
Genome browser
AA seq
1962 aa
AA seq
DB search
MRGAEEPQIAEDMSEEEDGVLEDLEEFYPEEQVNTQKKKKKAKKLKENKASKVKRKKKEG
NHEDEISENEEEAGENSESEGSDYSPNKKKKKKLKEKKEKKAKRKKKEENEEESEEGGLK
QPPERHGYKDDYSQEPKTSAQLMEEWGLDDVDYAFSEEDYHMLTNYKAFSQFLRPLVAKR
NPKIPMSKMMTVLGAKWREFSANNPFKGSSAAAAAAAIAAAVETVAIAPAPLTISPQQLL
PPPPAIRKAKTKEGKGPGVRKKIKNTKEIKKKGKGKKVGALKFRFGGIANKRKKGSSSEE
EEREESDSASINSSSVRSESSAVLGKRGKRRKKKKKIEEGDGYETDHQDYCEVCQQGGEI
ILCDTCPRAYHLVCLDPELEKAPEGKWSCPHCEKEGIQWEPKEEDEEEEEVGEEEDDHME
FCRICKDGGELLCCDTCPSSYHLHCLNPPLPEIPNGEWLCPRCTCPPLKGKVQRILHWIW
QEPPAPLAPALPSADLELAALPPKPLEGIPEREFFVKWAGLSYWHCSWVKELQLELYHTV
MFRNYQRKNDMDDPPAFDYGSGDEDTKIEKRKSKDPEYAKMEEKYYRYGIKPEWMMIHRI
LNHSFDRKGDVHYLIKWKDLPYDQCTWEVDEIDIPYYENFKQQYWNHREMMLGEESSQTA
KRLSKKGKKFNDEKLERPPESPLVDPTVKFDKQPWYIDTTGGTLHPYQLEGLNWLRFSWA
QGMDTILADEMGLGKTVQTIVYLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPEFY
VVTYTGDKESRSVIRENEFSFEDNAIRSGKKVFRMKKEAQIKFHVLLTSYELITIDQAIL
GSIEWACLVVDEAHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPE
RFNNLEGFLEEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQ
KKYYKLILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDG
SSLVKSSGKLMLLQKMLKKLRDGGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITG
GLRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHR
IGQNKKVMIYRFVTRASVEERITQVAKRKMMLTHLVVRPGLGSKSGSMTKQELDDILKFG
TEELFKDDVEGMISQAQKIGIPEAMTPFMESPASKGGTVTPSMKKKHGPAPPGDNKDVED
SSVIHYDDAAISKLLDRNQDATDDTELQNMNEYLSSFKVAQYVVREEDGVEEVEREIIKQ
EENVDPDYWEKLLRHHYEQQQEDLARNLGKGKRVRKQVNYNDASQEDQEWQDELSDNQSE
YSIGSEDEDEDFEERPEGGRRQSRRQLKSDRDKPLPPLLARVGGNIEVLGFNARQRKAFL
NAIMRWGMPPQDAFNSHWLVRDLRGKSEKEFRAYVSLFMRHLCEPGADGAETFADGVPRE
GLSRQHVLTRIGVMSLVRKKVQEFEPVNGKYSTPDLIPEGLESKKGGEVLSSDPNTPVPA
SPAHGQVGPTLQTDKADPQPGIPQEKDPLEQRAKKPRESQVPVNREKTEKDEKEEIVVGQ
AKPGEESIEEGERVEPVPEQPAKAPADETSQENEKPAAKPESNASPCKGSSKESKSDDAK
AEEKEVSEAQQNGEKEEEEDGKKDDKSGIRFMFNIADGGFTELHTLWQNEERAAVSPGKI
YDIWHRRHDYWLLAGIVTHGYARWQDIQNDPHYVILNEPFKSEIHKGNYLEMKNKFLARR
FKLLEQALVIEEQLRRAAYLNMTQDANHPAMALNARLAEVECLAESHQHLSKESLAGNKP
ANAVLHKVLNQLEELLSDMKADVTRLPSMLSRIPPVAARLQMSERSILSRLTNRGSDPSI
QQASFGSSQIYSNNFGPNFRGPGPGGIVNYSQMPLGPYVTDI
NT seq
5889 nt
NT seq
+upstream
nt +downstream
nt
atgcgcggcgcggaggagccgcagatcgcggaggacatgtcagaagaagaggatggagtc
ctggaagatctggaggagttttatcccgaggagcaggtgaacacccagaagaagaagaag
aaggccaagaagctgaaggagaacaaggcatctaaagtcaagaggaagaagaaggagggg
aaccacgaggatgaaatctccgaaaacgaagaggaagctggagagaattcagagagtgaa
ggcagcgactattcccccaacaagaagaagaagaagaagctgaaagagaagaaggagaag
aaggccaagaggaaaaagaaggaggagaacgaggaggagagcgaagaaggaggcttaaaa
cagccaccagaacgccatgggtacaaggatgactacagccaggagcccaagacctcggct
cagctcatggaggagtggggtctggatgacgtggactatgccttttccgaagaagactat
cacatgctgacaaactacaaggccttcagccagtttctcagacctttggttgccaaaagg
aaccccaaaatccccatgtccaagatgatgactgttctgggtgccaagtggagggagttc
agcgccaacaaccccttcaaaggcagctctgctgctgctgctgcagctgccatagcggcg
gctgtcgaaaccgttgccatagctccggcgccactgaccatcagcccccagcaactgctg
ccaccaccacccgccatcaggaaagccaaaaccaaggagggaaagggtcccggcgtgcgg
aaaaaaattaagaacaccaaagagatcaagaagaaagggaaagggaagaaagtgggggct
ctgaaattccgctttgggggaatcgccaacaagaggaaaaagggctcctcgagcgaggag
gaggaacgggaggaatctgacagcgccagcatcaatagctcctcagtgcgctccgagtcc
tctgctgttctgggcaagaggggaaagaggcggaagaagaagaagaaaattgaggaagga
gacggctatgagacagaccaccaggattactgcgaggtgtgccagcaaggaggggagatc
attctctgtgacacctgccctcgggcctaccacctcgtctgtttggacccagagctggag
aaggcgccagaagggaagtggagttgtccacattgtgaaaaagaaggaatccaatgggag
ccgaaggaagaggatgaggaggaagaggaggtcggtgaggaagaggacgaccacatggag
ttctgccgcatctgcaaggacggaggggagctcctttgctgcgacacctgcccgtcctcc
taccacctgcactgcctcaacccacctttgccggagataccaaatggtgaatggctctgc
ccccgttgtacatgcccgccactgaaagggaaagtgcagaggatcctccactggatctgg
caggagcccccagccccgctcgcgccagccttgccttcagcggatctggagctggctgcc
ctgccaccgaagcctctggaggggatccccgagagagagttcttcgtgaagtgggcaggg
ctgtcctactggcactgctcctgggttaaagagttgcagctggagctctaccacactgtg
atgttccgcaactaccaaaggaagaacgatatggacgaccctccggctttcgactatggc
tcgggcgacgaggacacgaagatagagaagaggaagagcaaagaccccgagtatgccaag
atggaggagaagtattatcgctatgggatcaagcctgaatggatgatgattcatcgtatc
ctcaaccacagctttgacaggaaaggagatgtccactatctgatcaagtggaaggacctg
ccgtatgatcagtgcacctgggaggtggatgaaatcgacattccgtactacgagaacttc
aagcagcaatactggaatcacagggagatgatgctgggagaggagagcagccagaccgcc
aagaggctgagcaagaaagggaagaagttcaatgatgagaaactagaaaggcctccagaa
tcgcctcttgtggatcccacagtaaaatttgacaagcagccgtggtatattgatacaact
ggtgggacgttgcacccttatcagctagagggtctcaactggctgcggttctcctgggcg
cagggaatggacaccatcctcgctgatgagatgggcctcgggaagaccgtccagaccatt
gtgtacctttactccctttacaaagagggccactccaagggtccgtacctggtcagcgcc
cccctttccaccatcatcaactgggagcgggagtttgagatgtgggcgcccgaattctac
gtagtcacgtacaccggggacaaggagagccggtctgtgattcgcgagaatgagttctcc
tttgaggacaacgccatccggagtgggaagaaagtttttcggatgaagaaagaagctcag
atcaagttccatgtcctgctcacgtcctatgagctcatcactattgaccaggccattctg
ggatccattgagtgggcatgcctggtggtggatgaagcccacaggctgaagaacaaccag
tccaaattctttagggtgctcaacagctacaaaatcgactataagttgcttctgaccggg
acgcctctgcagaacaacctcgaagagctcttccacttgctcaacttcctcacgccagag
aggttcaataaccttgagggcttcctggaagagtttgcggacatctccaaggaggaccag
atcaagaaactgcatgaccttttgggacctcacatgctccggaggctgaaggccgatgtg
tttaagaacatgcctgccaagacggagctgattgtcagggtggagctcagccagatgcag
aagaaatactacaagttaatcctgacaaggaactttgaggctctgaattcgaaaggtgga
ggcaaccaggtgtccctgctcaatatcatgatggatctcaagaagtgttgtaaccatccg
tatcttttccccgtggcggccgtggaagccccggtattgccaaatggatcctacgatggc
agctcgctggtgaagtcgtctgggaagttgatgctgctgcagaagatgctcaagaagttg
agggacggcggccaccgggtgctcatcttctcccagatgacgaagatgcttgacttgttg
gaagatttcttggaatacgagggttataagtatgagcggattgatggtggcatcactgga
gggttgaggcaggaagccatcgacaggtttaacgcacccggagctcagcaattctgtttc
ctgctctccaccagagccggaggtttgggcattaaccttgcaacagccgacacagtcata
atttacgattctgattggaacccccacaatgacattcaggccttcagcagagcccaccgg
attgggcagaataagaaggtgatgatctaccgctttgtgacgagggcgtctgtcgaggag
cgcatcacccaagtggccaagaggaagatgatgctgacacatttggtggtgcgcccaggc
cttggctccaagtctggctccatgacgaaacaagagctggatgacatcctgaagtttggc
acagaggaactgtttaaggacgacgttgaggggatgatatctcaggcccagaaaattggc
atacctgaggccatgacccctttcatggagtcaccagcctccaaaggtgggacggtgact
cctagcatgaagaaaaaacatggccctgctcctccaggtgacaataaagacgtagaggac
agcagcgtgatccattacgacgacgcagccatctcaaagctcctggaccgcaaccaagat
gccactgacgacacggagctgcagaacatgaacgagtatctcagctcttttaaagtggcc
cagtatgttgtgagagaagaggacggtgtggaggaagttgagcgcgagatcatcaagcag
gaggagaacgtggaccctgactactgggagaagctcttgaggcaccactacgaacagcag
caggaggatttggcccgtaatcttgggaaagggaagagagtccggaagcaggtcaactac
aacgatgcctcgcaggaggaccaagagtggcaggacgagctgtccgacaatcagtccgag
tactccatcggctctgaagatgaggacgaagactttgaggagcggccggaaggtggccgg
cggcagtcccgaaggcagctgaagagtgacagggacaagcccctcccaccgttattggcg
agagtcggtggcaacattgaggttttgggcttcaacgcccgccagcggaaagcgttcttg
aatgccatcatgcgctgggggatgccccctcaggatgccttcaattcccactggctggtg
cgggacctccgggggaaaagcgagaaggagttcagggcctacgtctccctgttcatgagg
cacttgtgcgaacccggggcagacggggcggagaccttcgctgacggcgtcccccgcgag
gggttgtcccggcagcatgtgctgacccgaattggtgtgatgtcgctagtaaggaagaag
gttcaagagttcgaacctgtcaatgggaaatacagcactcctgacctcatcccggaaggc
ctggagagcaaaaagggcggggaggttctttcttcggacccaaacacgcctgtcccggcc
agcccagctcatgggcaggtggggcccacgttgcaaacagacaaagcggacccgcagcca
gggatcccccaagaaaaagatccattggagcagagggcaaaaaagccacgggagagccag
gtgccggtgaacagagagaaaacggagaaggacgagaaggaggaaattgtggtgggacaa
gcaaaaccgggcgaagagagcattgaagagggcgagagggtggagcctgtcccggagcag
ccagcaaaagctcctgcagatgagacctcccaggagaatgaaaagccagccgcaaaaccg
gaatcaaacgccagcccctgtaaaggaagcagtaaagaatccaagtcagatgatgccaag
gcagaagaaaaggaggtgtcagaggctcagcagaatggagaaaaggaggaggaggaggat
gggaagaaggacgacaagagtgggatccgattcatgttcaacatcgctgacgggggcttc
acagaactgcacacgctgtggcagaacgaggagagggcggctgtctccccggggaagatt
tacgacatctggcaccggaggcacgattactggctcctggcaggaatcgtcactcacggc
tacgcccgctggcaagacatccagaacgacccgcattatgtaatcctgaacgagcccttc
aagtcagagatccacaagggtaactacttggagatgaagaacaagttcctggcacggcgg
ttcaagttgctggagcaggcgctggtgattgaggagcagctccgccgggcagcgtacctc
aacatgacccaggacgccaatcacccggccatggccttgaacgcccgcttggctgaagtg
gagtgccttgctgagagccaccagcacctctccaaagagtccctcgcggggaacaagccc
gccaacgccgtccttcataaagtcctaaaccagctggaagagctgctgagtgacatgaaa
gccgatgtgactcggttgccctccatgctttcccgcatcccacctgtggccgctcgcctc
cagatgtctgagagaagcatcctgagccggctgacaaaccgggggagcgaccccagcatc
cagcaggcctcttttggctcctcccagatctacagcaacaactttggcccaaacttccgt
ggtccaggaccaggtgggattgtcaactacagtcagatgcccctgggaccttacgtgacg
gatatttag
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