Zootoca vivipara (common lizard): 118086866
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Entry
118086866 CDS
T07275
Symbol
USP39
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 2
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
zvi
Zootoca vivipara (common lizard)
Pathway
zvi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
zvi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118086866 (USP39)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
zvi03041
]
118086866 (USP39)
Spliceosome [BR:
zvi03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
118086866 (USP39)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
118086866
NCBI-ProteinID:
XP_034974756
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Position
LG6:complement(91663043..91680408)
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AA seq
548 aa
AA seq
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MSGRVKRERDSRPLSVRSSLSSRAPQEPGGEGGAPRGLRADAGRVKREPADEEPRVKQEP
LDEEDDDEEPTVKYGRFDPEDRRSRHCPYLDTINKSVLDFDFEKLCSISLSHINVYACLV
CGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFYCLPDNYEIIDSSLEDITYVLKPTFT
KQHISNLDKQAKLSRAYDGTTYLPGIVGLNNIKANDYANAILQALSNVPPLRNYFLEEEN
YKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKKNFQITKQGD
GVDFLSWFLNALHSALGGTKKKKKTIMTDVFQGSMRIFTKKLPHPDLPAEEKEQLLQNDE
YQEKMVESTFMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILAKFNGITEKEYKTYKENFL
KRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLREYLSEEVQAVHKNTTYD
LIANIVHDGKPTEGAYRIHVLHHGTGKWYELQDLQVTDILPQMITLSEAYIQIWKRRDSK
EETNQQGA
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgtctggacgggtgaagcgggagcgggattcccgcccgctgtcggtgcggagctcgctg
tccagccgcgccccgcaagagccaggcggggagggcggcgcgcctcgaggcctgcgggcg
gacgccgggcgggtgaagcgggagcctgccgacgaggagccccgggtcaagcaggagccg
ctcgacgaggaggacgatgacgaggagcccaccgttaaatatggtcgattcgacccagag
gaccgacggagcaggcactgcccatacttggacaccataaacaagagtgttctcgacttt
gactttgagaagctgtgttcaatctcgctctcccatatcaacgtttatgcttgcttggtg
tgtgggaaatattttcagggtcggggcttgaaatcccatgcttacattcacagtgtacag
ttcagccatcacgtcttcctcaaccttcacaccctgaagttctattgtctgccagacaac
tatgaaatcattgattcttcacttgaggatatcacctatgtcctgaagcccaccttcacc
aagcaacatatttccaacttggataagcaagccaaactctctcgagcctatgacggcacc
acgtacctgccgggcattgtgggattgaacaacatcaaagcaaatgattatgctaatgcg
attctccaggccctatctaatgtcccaccactgcggaattattttttggaggaggagaac
tacaagaacatcaagcgccctccaggagacatcatgtttctgctggttcagagatttgga
gagctcatgaggaaactatggaatcctcgaaatttcaaggctcacgtctccccccatgaa
atgctgcaggctgtggttctctgcagcaagaagaacttccagatcaccaagcaaggtgat
ggggttgactttctgtcctggttcctgaatgccttgcattctgctcttggggggacaaag
aagaagaaaaagaccattatgacagacgttttccagggctccatgcggatattcaccaag
aaattgccacaccctgatttgccagcagaggagaaggagcagctgctccagaatgacgaa
taccaggagaaaatggtggaatccactttcatgtatctaaccctggacctccccacggct
cccctgtacaaggatgagaaggagcaactcatcattccccaagtaccgcttttcaacatc
ctggccaagttcaacggaattacagagaaggaatataaaacctataaggagaacttccta
aagcgtttccagctcaccaagttgcctccttacctcatcttttgcatcaagaggttcacc
aaaaacaatttctttgtggagaagaaccccactattgtcaacttccccataacgaatgta
gatctccgggaatacctgtctgaggaagtgcaggctgtacataagaatacaacctatgat
ctcatcgcaaacatcgtgcatgatgggaaaccaacagaaggggcataccggatacatgta
ttgcaccatggcacaggcaagtggtatgagctgcaagatttgcaggtgacagacattctt
ccccagatgatcaccctctctgaggcttacattcagatctggaaaagacgagatagcaaa
gaggagaccaaccagcaaggggcttga
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