Zootoca vivipara (common lizard): 118086902
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Entry
118086902 CDS
T07275
Symbol
EDC4
Name
(RefSeq) enhancer of mRNA-decapping protein 4 isoform X1
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
zvi
Zootoca vivipara (common lizard)
Pathway
zvi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
zvi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
118086902 (EDC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zvi03019
]
118086902 (EDC4)
Messenger RNA biogenesis [BR:
zvi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
118086902 (EDC4)
mRNA degradation factors
5'-3' decay
Decapping complex
118086902 (EDC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40
WD40_WDHD1_1st
Beta-prop_EDC4L
WD40_CDC20-Fz
Beta-prop_HPS5
WD40_Prp19
ApoLp-III
Beta-prop_TEP1_2nd
NBCH_WD40
Uteroglobin
WDR55
CowN
Motif
Other DBs
NCBI-GeneID:
118086902
NCBI-ProteinID:
XP_034974855
LinkDB
All DBs
Position
LG6:complement(53449834..53481625)
Genome browser
AA seq
1402 aa
AA seq
DB search
MASASIDIEDATQHLRDILKLDRPSGSVNENQRSSTSYNGDLNGLLVPDPIASGDGASLT
KPVAQAVPLGALQEKQVICLSGDDSSTCMVITAKDVEIVASSDSSITSKARGSNKVKIQP
VARYDWEQKYYYGNLIAVSNAYLAYAIRGASNGSAMVRVLSVSTAERTLLKGFTGGVADL
AFAHLNSNQLACLDEVGNLFVWRLAMENGKIQEEILVNIKRPDGTPLNSSRRIIWCPFIP
DENEESCEEGSQTLALLHEDRAEVWDLDIIRANHNSWPVEVTSIKEGFIVVKGHSTRLSE
GALSPDGTVLATASHDGFVKFWQIYIEGQDEPRCLHEWKPHDGRPLSCLLFCDNHKKQDP
EVPFWRFLITGAEQNRELKMWCTVSWTCLQTVRFSPDIFSSMSVLPSLKACLDLSAEYLI
LSDVQRKVLYVMELVQNQEEGKAYFSSISEFLLTHPVLSFGIQVVSRCRLRHTEVLPAEE
ETDGLSAEGTQGTGAVESAAGVLIKLFCVHTKALQDVQIRFQPLHSPDTAAPIPPHGSHE
DFAFPDHLADLGTEGLGSEKGSVHGSQPDLRRISELSVPVDFLSTSNDTKPKLMTPDAFM
TPSTSLQQVTVSPGSSISSLTAVTTMSTSSVSDPSIPRPAEEVSLSPKMQLDSSLTLSGS
SGSLQTSPRSHSVLLPGLPDKLTPKAPIPVSPGNAPLVLERQEVEPLVVPQSSPTRERSP
DVISSASTAMSQDIPEIASETLQRSFGGGPPGLPAEILDSNHHADSMASAASALHLLSPR
NRHSSEHSHHSLDMAPNEVDMLTAPSLLEAALPQENVASDAGVSQPWPAAPDITRETRNS
MADSPRNEVEEKHKSSYHRHSYHLLQHDSQDASAEQSDHDDEVASLASTSGGFSAKAAAQ
RLPVKDWKAKVSPRASPKLKRKGKKDDGSRDVQQSPRSFDQQVAPEYQDELLSLLRTQQR
EIVELRQNQMELMQRLTDHLDAVQSSLMGHIERVVDSQQEQEQRRLDQALAEGQQRSGQL
QEHLSQQLSQSLSTVACNRLERTIREEMKKTVPPCVSKTLDPITGQLNNTIATKLTAIEG
MLKENVTKLVKSKNLTDAIARAAADALQGPMQSAYREAFQSVVLPAFEKSCQSMFQQIND
TFKQGTQEYIQQLETHMKSKKAREQDARDSVVSQLRQLVNNFQSTTDQLAATITASMHSE
VQHQLHVIVGNMQESILAQVQRVIKGEVSMAMKEQQAAVTSSIMQAMRSAAGTPIPATHL
DFQSQQAHVLQLLQQGHLNQAFQQALTAADLNLVLYVCETVDPQQVFGQHPCPLSQPVLL
SLIQQLSSDLGARTELKLNYLEEAVMHLDHSDPITRDHMGSVMNQVRQKLFQFLQTEPQN
SLSKPARRLMIMLQGLATPSMS
NT seq
4209 nt
NT seq
+upstream
nt +downstream
nt
atggcctccgctagcatcgatatcgaggacgcgactcagcatctccgagacatcctcaag
ctggatcggccgagcggttcagtcaacgaaaaccagagatcatccacttcatacaatgga
gacctgaatggtttgctggtgccagatcccatagcatctggagatggcgcttccttgacg
aagccagtagcccaagcagttcctctgggagcacttcaggagaagcaagtcatctgcctc
tctggagatgatagctctacctgtatggtgataactgctaaagatgttgagatagtagcc
agcagtgactctagcatcaccagtaaagctagagggagcaacaaggtaaaaatccagcca
gtggccaggtatgactgggagcagaaatattactatggtaacctgattgctgtgtcaaat
gcctacctggcatatgccattagaggtgccagcaatggctctgcaatggttcgggtcctg
agcgttagcacggcggagcgaaccctgctgaagggcttcacaggtggagtagcagacctg
gcttttgctcacctcaactccaaccagctcgcttgcctggatgaagttggcaacctcttt
gtctggcgcctggccatggagaatggaaaaatccaagaggagatcctggtaaacatcaag
cgacctgatgggactcctctgaacagctcccggaggatcatatggtgtcccttcatccca
gatgagaacgaggagagctgtgaggaaggcagtcagaccctggcactcctacacgaggat
agggcagaggtttgggaccttgatataatccgagccaatcataattcatggccagtggaa
gtgaccagcatcaaagagggctttattgtggtaaaaggtcacagcacgcgtctgagtgag
ggagccctttccccagatggaactgtcttggccaccgcaagccatgatggctttgtcaaa
ttctggcagatttacatagaagggcaggatgaaccaaggtgcctgcatgaatggaagcct
catgatggtagacctctctcctgcttgctgttctgtgacaaccataaaaaacaagatcca
gaagttcccttctggaggtttctcatcacaggagcagaacagaatcgagagctgaagatg
tggtgcactgtatcatggacctgcctgcagactgtccgattttctccggatatattcagc
tccatgagtgtccttcctagtttgaaggcctgcctggatctctcagctgaatacctgatt
ttgagtgatgtgcagagaaaggtcttgtatgtgatggaacttgtgcaaaaccaggaggag
ggcaaggcttatttcagctccatctcagagtttctgctgacccatccagtcctgagtttt
ggcatccaggtggtcagccgctgccggctgagacacacagaggtcctgccagcggaagag
gagactgatggccttagtgcagaaggtactcaaggtactggagcagtagaatcagcagca
ggggtgctgatcaaactcttttgtgtccacaccaaggcccttcaggatgtgcagatcaga
ttccaacctctccatagtccagacacagctgctccaattcctccccatggctcccatgaa
gattttgcattcccagatcatcttgctgacctgggcacagaagggcttggatcagagaag
ggatccgtgcatggctcacagcctgacttgcgccgcatttcagagctatctgttcccgtg
gatttcctctccacttccaatgacacaaaacccaaactcatgactccagatgcattcatg
actcccagtacatctctgcagcaggtcacggtgtcacctggaagcagcattagttccctc
acagctgtcacaaccatgagcacttcttccgtcagtgacccctccattcccaggccggct
gaagaagtgtctctgagcccaaagatgcagctggatagtagccttaccctaagcggcagc
agtggaagtctgcagacaagccctcggagtcattcagtcctcctccctggccttcctgac
aaactgaccccaaaggctcccatcccggtttccccagggaatgcccctcttgtgctagag
cggcaggaagtggagcctctggtggtgccccagtcttcgcctactcgtgagcgctcccca
gacgtcatttcctctgcctctaccgccatgtctcaggacatcccagagattgcctctgag
actctgcagcgcagctttggagggggcccccctgggctccctgcagagatcctggattcc
aaccaccacgcggacagtatggcttccgcagcatcagccttgcacttgctctccccgcgg
aatcgtcacagctcggagcacagccatcactctttggacatggcccccaatgaagtggac
atgctgactgcgccttcgctgctggaggcggccttacctcaggaaaatgtggcttctgac
gctggcgtgagccaaccgtggccagctgcccctgacatcaccagggagaccaggaacagc
atggcagacagccccaggaatgaagtggaagagaaacacaagagctcctaccacaggcac
agctaccacctcctgcagcatgacagccaggatgccagtgctgaacaaagtgaccatgat
gatgaagttgcaagcttggcttctacgtctggtggatttagtgccaaagcagctgcacag
cggctgcctgtgaaggactggaaagccaaagtgtcgcctcgagcctccccaaagctaaag
aggaaggggaagaaagatgatggttccagggatgttcaacagtccccaagatcctttgat
cagcaggtcgctcctgagtaccaggatgagctgttgtctcttctgaggacccagcagagg
gagattgttgaactgagacagaaccagatggaactcatgcagaggctcaccgaccacctg
gatgctgtacagagctccctcatgggccacattgagcgagtggtggattcccagcaagag
caggagcagcggaggctggaccaggccttagctgagggacagcagcgcagtgggcaactg
caggagcacctgtcccagcagctttcccagtccctctccacggttgcctgcaaccggctg
gaaaggaccatccgcgaggagatgaaaaagacggtgcccccgtgcgtttccaagactttg
gatcccatcactgggcagctgaataacaccattgccaccaaacttacagccattgagggg
atgctgaaggagaacgtcaccaaactggtgaaatcaaagaaccttacagatgccattgcc
cgggcggctgctgatgccttgcaaggccccatgcagtcggcatacagggaggcgttccag
agtgtggtgcttcctgcttttgagaagagctgtcaatcaatgttccagcagatcaatgac
accttcaagcaaggcacacaagaatatattcagcagctggagacccacatgaagagtaag
aaagcgcgagagcaggatgcccgggactctgtggtgagccagctccggcagctggtcaac
aacttccagagcacaactgatcagctggcagccaccattacggccagcatgcactccgag
gtgcagcatcagcttcacgtcatcgtgggcaacatgcaggagtccatcctagcccaggtc
cagcgggtgatcaaaggggaggtgagcatggccatgaaggagcagcaggctgccgtcacc
tccagcatcatgcaggccatgcgctctgctgcaggcactccgatccctgccactcacctt
gacttccagtcccagcaggctcacgtgttacagctgttgcagcaggggcacctgaatcaa
gccttccagcaggctctcactgcagccgatttgaacctagtcctctacgtctgtgagaca
gttgaccctcagcaagtgtttgggcagcacccctgcccactgtcccagcctgtcctcttg
tctctcattcagcagctctcctcagatttgggagctcggacagaactgaaactgaattac
ctggaggaggcagtgatgcatctagaccacagcgaccccatcacccgcgaccacatgggc
tctgtgatgaaccaagtgcggcagaagctcttccagttcctgcagacagaacctcagaac
agcctgagcaagccagcccgccgactcatgatcatgcttcaaggcctggccacacccagc
atgtcctaa
DBGET
integrated database retrieval system
