Zootoca vivipara (common lizard): 118087096
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Entry
118087096 CDS
T07275
Symbol
SUPT5H
Name
(RefSeq) transcription elongation factor SPT5
KO
K15172
transcription elongation factor SPT5
Organism
zvi
Zootoca vivipara (common lizard)
Pathway
zvi03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
zvi00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
118087096 (SUPT5H)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
zvi03021
]
118087096 (SUPT5H)
03019 Messenger RNA biogenesis [BR:
zvi03019
]
118087096 (SUPT5H)
Transcription machinery [BR:
zvi03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
118087096 (SUPT5H)
RNA polymerase I system
118087096 (SUPT5H)
Messenger RNA biogenesis [BR:
zvi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
118087096 (SUPT5H)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KOW
KOW4_SPT5
KOW5_SPT5
KOW7_SPT5
KOW2_Spt5
Spt5-NGN
KOW6_SPT5
KOWx_SPT5
Spt5_N
KOW1_SPT5
GPKOW_C
DUF3912
Motif
Other DBs
NCBI-GeneID:
118087096
NCBI-ProteinID:
XP_034975318
LinkDB
All DBs
Position
LG6:complement(14271180..14297478)
Genome browser
AA seq
1080 aa
AA seq
DB search
MSDSEDSNFSEDESERSSEPEEVEENEAEERVSAVGSEKEEVEEEEEEEEEYDEEEEEDD
DDRPAKKPRHGGFILDEADVDDEYEDEDNWEDGAEDILEKEEFEASNIDNVVLDEDRSGA
RRLQNLWRDQREEELGEYYMKKYAQSSVRETEYGGSNELSDDITQQQLLPGVKDPNLWTV
KCKIGEERATAIALMRKFIAYQFTDTPLQIKSVVAPEHVKGYIYVEAYKQTHVKQAIEGV
GNLRMGYWNQQMVPIKEMTDVLKVVKEVTNLKPKSWVRLKRGIYKDDIAQVDYVEPSQNQ
ISLKMIPRIDFDRIKDRMSLKDWFAKQKKFKRPPQRLFDAEKIRSLGGDVASDGDFLIFE
GNRYSRKGFLFKSFAMSAVITEGVKPTLSELEKFEDQPEGIDLEVVTESTGKEREHNFQP
GDNVEVCEGELINLQGKILSVDGNKITIMPKHEDLKDMLEFPAQELRKYFKMGDHVKVIA
GRFEGDTGLIVRVEENFVILFSDLTMHELKVLPRDLQLCSETASGVDVGGQHEWGELVQL
DPQTVGVIVRLERETFQVLNMFGKVVTVRHQAVNRKKDNRFAVALDSEQNNIHVKDIVKV
IDGPHSGREGEIRHLFRSFAFLHCKKLVENGGMFVCKTRHLVLAGGSKPRDVTNFTIGGF
QPMSPRINSPMHPSAGGQRGGFGGGGMSRGRGRRDNDLIGQTVRISQGPYKGYIGMVKDA
TESTARVELHSTCQTISVDRQRLTTFGSRRPGGMTSTYARTPMYGSQTPMYGSGSRTPMY
GSQTPSHDGNRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRADEEFDYGFDDEPTPS
PQGYGGTPNPQTPGYPDPSSPQVNPPYNPQTPGTPAMYNTDQFSPYAVPSPQGSYQPSPS
PQSFHQVAPSPVGYQNTHSPASYHPTPSPMAYQASPSPSPVGYSPMTPGAPSPGGYNPHT
PGSGIEQSSSDWVTTDIQVKVRDTYLDSQVVGQTGVIRSVTGGMCSVYLKDSEKVVSISS
EHLEPVIPTKNNKVKVILGEDREATGVLLSIDGEDGIVRMDLEEQLKILNLRFLGKLLEA
NT seq
3243 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacagcgaggacagcaacttctctgaagatgagagcgagcgcagcagtgagcca
gaagaggtggaagagaacgaggctgaagagcgtgtcagtgccgtaggcagcgagaaggag
gaagtggaggaagaggaagaagaagaggaagaatatgacgaagaggaggaagaggatgat
gatgaccggcctgcgaagaaacccagacatggcggatttattttagatgaagctgatgtg
gatgatgagtatgaagatgaagacaattgggaggatggtgcagaagacatcctggagaaa
gaggaatttgaagcatccaacatcgacaatgtggttctggacgaggatcgttctggggca
cggaggctgcaaaacttgtggagggaccaaagagaggaggagctgggcgagtattacatg
aagaagtatgcccagtcttcggtgcgcgagacggagtacgggggctccaacgagctttct
gatgacatcacacagcaacagctcctgcctggagtcaaggatcccaacctctggactgtg
aaatgcaagattggagaggagcgggccacagccattgcgctcatgaggaagttcatcgcc
taccagttcacagatacacccttgcagatcaaatcggtggttgcccccgagcacgtgaaa
ggctacatctacgtggaggcctacaagcagacgcacgtcaagcaggccatcgaaggggtg
ggcaacctccggatgggctactggaaccagcagatggtgcccatcaaggagatgactgac
gtgcttaaggtggtgaaggaggtgaccaacttgaagcccaagtcatgggtgcgcctcaag
aggggcatctacaaggacgacatcgctcaggtggattatgtggagcccagccagaaccag
atttccctgaagatgattccccgtatcgattttgaccgcatcaaagaccgcatgagcctg
aaagactggtttgccaaacagaagaagttcaagcgtccaccgcagcgcctctttgatgcc
gaaaagatccggtctttgggtggtgacgtggcctccgatggggatttcctcatctttgag
gggaatcgttacagcaggaagggcttcctcttcaagagctttgctatgtctgccgtgatc
acagaaggagtgaagcccactctgtctgagctggagaaatttgaagaccaaccggaaggc
attgacttggaggtggtgacggaaagcacagggaaggagcgggagcacaacttccagccc
ggcgacaacgtggaggtgtgcgagggggagttgatcaacctgcaaggcaagatcctgagc
gtggacgggaacaagatcaccatcatgccgaagcacgaagacctcaaggacatgctagaa
ttcccggcccaggagttgcgcaaatacttcaaaatgggggaccatgtgaaggtgattgcc
ggccgctttgagggcgacacgggactgattgtccgtgtggaggagaacttcgtaatcctt
ttctccgacctcacaatgcatgagctcaaagtcctcccccgagaccttcagctctgctct
gagacagcctctggcgtagatgttggcggccagcacgagtggggggagctggtgcagctg
gacccccagacagtgggggtcattgtccgcctggagcgggagaccttccaggtcctcaac
atgtttggcaaagtggtgacagtcaggcaccaggctgtgaaccggaagaaggacaaccgc
tttgccgtggcgctggactctgagcagaacaacatccatgtcaaagacattgtgaaagtc
atcgacgggccccactcgggtcgcgagggcgagatccgccacctcttcaggagcttcgct
ttcctgcattgcaagaagctggtggaaaacgggggcatgtttgtgtgcaagacgcgccat
ttggttctggccggaggctcaaagccccgggacgtcacaaacttcaccattggcggcttc
cagcccatgagtcctcgcatcaacagtcccatgcatcccagtgctggagggcagcgcggg
ggctttggaggaggcgggatgagccgaggccgcgggcgcagagataacgacctcattgga
cagaccgtgcggatttcccaaggcccctacaaaggctacattggcatggtcaaggatgcc
acagaatccactgcccgcgtggagctgcattccacctgccagaccatctctgtggaccga
cagcgtctcacgaccttcggttcaaggagaccaggtggcatgacctccacttatgcacgg
acccccatgtacggttctcagacccccatgtacgggtcagggtcccgtacgccgatgtat
gggtcacagactccgtcgcacgatggcaaccggactcctcactacggctctcaaaccccc
ttgcacgacggcagtcggacacccgcacagagtggggcttgggaccccaacaaccccaac
actccctccagggcggatgaagagtttgactatggttttgatgacgagcccaccccttct
ccacaaggctatggcggaacccccaacccacagactcctggctatcccgacccttcttcc
ccgcaggttaacccaccatacaaccctcagacgcctgggaccccagctatgtataacaca
gaccagttttctccctacgccgttccatcccctcagggctcctaccagccaagtccaagc
ccgcagagtttccatcaagtggcgcctagcccagtaggctaccaaaacacccactctcca
gccagctaccacccgacaccgtctcccatggcttaccaggctagtcccagccctagccca
gtgggctacagccctatgactccaggggctccctctccaggaggttacaaccctcacaca
cctggttccgggattgagcagagctccagcgactgggtgaccaccgacattcaggtcaaa
gtacgcgacacctacttggacagccaggtcgtggggcagacaggagtcatccgcagtgtg
accggtgggatgtgctcagtctaccttaaggacagcgagaaggtagtcagcatttcgagt
gagcatctggagcctgtgataccaaccaagaacaataaggtcaaggtcattctgggagag
gaccgagaggccaccggcgtcctgttgagcattgacggagaggatggcattgtccgcatg
gacttggaagaacagctcaagatcctcaacctgcgcttccttggcaagctgctggaggcc
tag
DBGET
integrated database retrieval system
