Zootoca vivipara (common lizard): 118087107
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Entry
118087107 CDS
T07275
Symbol
CDH5
Name
(RefSeq) cadherin-5
KO
K06533
cadherin 5, type 2, VE-cadherin
Organism
zvi
Zootoca vivipara (common lizard)
Pathway
zvi04514
Cell adhesion molecules
zvi04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
zvi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
118087107 (CDH5)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
118087107 (CDH5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
zvi04515
]
118087107 (CDH5)
04090 CD molecules [BR:
zvi04090
]
118087107 (CDH5)
Cell adhesion molecules [BR:
zvi04515
]
Cadherins
Major cadherins
118087107 (CDH5)
CD molecules [BR:
zvi04090
]
Proteins
118087107 (CDH5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_CELSR2_9th
Cadherin_pro
Cadherin_2
DUF6377
EzrA
Motif
Other DBs
NCBI-GeneID:
118087107
NCBI-ProteinID:
XP_034975329
LinkDB
All DBs
Position
LG6:52866401..52900336
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AA seq
772 aa
AA seq
DB search
MARCCLLLLSLTLVLASTHGEDFTRTAINSNINKRIKREWIWNKMHIIEEHNGTLPHHVG
RITSTIRNPNAKYVLEGEGAGTLFRVEDSTGDVSANERLDREKKAEYHLKAHILDRFTNK
SLEQPSVFRIIVYDINDNAPEFVQKVFNGSVLEMSPLGTSVTKVTAVDADDPTILGNTRV
SYKVIQGNQYFKIDDTGTIYTAVPDLDREKTPVYTIVVEAVDGHGLHSEDSGTATVRISL
TDINDNFPTFRKKNFHFEVPENTRLDGEVGRLEVEDIDEPQNRNTKYSFVQGPYQDTFRI
EPNPFTNEGIIRPKKPLDFEKVPSYKFDVEATDANINYAYSRTKGSKSIASVTIKVLDVD
EPPVFSQPFYIFEVQEESDIKKVIGFVSAHDPDRAKRKIRYHILRSNYFKISTTGHIFAL
KPLDREESAWHNITVAANELEQDRIVPNLETHVPVYIKVTDINDNAPEFADVYNPRVCEN
AAPGKTVIIISAVDKDEMSPGVKFKFSLVSDESNFTLINNHDSTANVTVKYGQFNRELVK
THYLPIIISDNGSPQQSSTNTLAIHVCKCNEEGDFTFCEEPAKQMGVSVQALVAILVCIL
TIIVIMVLIVMRKRHRKDLNILRKNVTDIHEQLVAYDEEGGGEMDTTSYDVSVLNSVRQT
SMRSPRMTMENRPCVYSHVQKPPGNGISGTGEMGIMIEVKKDEADNDGDLLPYDTLHIYG
YEGAESIAESLSSLGSGSSDSDIDYDFLNDWGPRFKMLAELYGLEPSEDLLY
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atggcaagatgctgccttctcctgctttctttgacgctggttctcgctagtactcatgga
gaagatttcacaaggactgccattaacagtaacattaacaagcgcataaagagagagtgg
atctggaataaaatgcatattatcgaagagcacaatgggactctgccacatcatgttggg
aggatcacatcaaccatcaggaatcccaatgctaaatacgttcttgaaggggaaggtgct
gggactctgtttagagttgaagacagcactggagatgtgtctgcaaatgagaggctggac
cgagagaagaaagcggagtaccacttgaaggctcacattcttgaccgtttcaccaataag
tcattggaacaaccctccgtgttccgtatcatagtctatgacatcaatgacaatgcccca
gaatttgtacaaaaagtgtttaatggttctgtcttggaaatgtcaccactaggaacatca
gtcaccaaagtgacagctgtagatgctgatgaccccacaattcttggcaatactcgtgtt
tcctacaaagttattcagggaaaccaatacttcaaaatagatgatactggaacaatctac
acagctgtaccagatttggacagagaaaaaacccctgtttatacaattgtggtagaagca
gtggatggtcacggtctacactcagaagactcaggcactgctacagtccgcatctcactg
actgatatcaacgacaacttcccaacatttaggaaaaaaaacttccattttgaagtccct
gaaaataccaggttagacggtgaagttggtagactggaagttgaagacattgatgagcca
cagaacagaaatacaaagtacagttttgtccaaggaccttaccaagataccttcagaata
gaaccaaaccccttcacaaatgaaggaataattagacctaagaagccactggactttgag
aaggtaccctcctacaagtttgatgttgaagcaactgatgccaacattaactatgcatat
tccaggacgaaaggatccaagagtattgcaagtgtaaccatcaaagttctcgatgttgat
gaaccacctgtcttttcccaacctttctatatatttgaagttcaagaggaaagtgacatc
aaaaaggttatcggatttgtgtcggcacatgacccagatagagcaaaacggaaaataaga
tatcacatcctgagatccaattatttcaaaatatccaccacgggacatatttttgccttg
aagcctttggacagagaagaaagtgcctggcataatataactgtggcagccaatgaactg
gagcaagacagaattgtgcccaatctagaaactcacgtaccagtttacattaaagttact
gatataaatgacaatgcaccagaatttgctgatgtttacaatcctagagtgtgtgaaaat
gctgcgccaggaaagactgttatcatcatttctgctgtggacaaggatgaaatgtcacca
ggagtgaaattcaagttttccttggtgtctgacgagagcaacttcactctaattaacaat
cacgacagcacagcgaatgtcaccgtcaaatacggacagtttaatcgggaactagtcaaa
acccattacttgcctatcatcatctctgacaacggctcaccccagcagagcagcacaaac
actcttgccatccatgtctgcaagtgcaacgaggaaggagacttcactttctgcgaagag
ccagcaaaacaaatgggagtcagcgtccaagcactagttgccatcttggtctgcatcctc
accatcattgtgattatggtgctaatagttatgaggaagcgacacaggaaagacctgaac
attctcaggaagaatgtgacggatatccatgagcagctggtggcctacgatgaagaaggt
ggtggtgaaatggacaccaccagctacgatgtgtcagtcctcaactcagtccgccagacc
agcatgaggtcaccgaggatgaccatggagaacaggccttgcgtgtactcccatgtacaa
aagcccccaggaaatgggatctcgggcaccggagaaatgggcattatgattgaggtgaaa
aaagacgaagctgacaatgacggggatttgctgccgtacgacactctccacatatacggt
tatgaaggggccgagtccattgcagaatccttaagctctttggggtcaggatcctcagac
tctgatatcgactatgattttctgaatgactggggtcccaggtttaaaatgctggcagag
ctttatgggctggaacccagtgaagatcttctgtattga
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