Zootoca vivipara (common lizard): 118087417
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Entry
118087417 CDS
T07275
Symbol
ZC3H12A
Name
(RefSeq) endoribonuclease ZC3H12A
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
zvi
Zootoca vivipara (common lizard)
Brite
KEGG Orthology (KO) [BR:
zvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zvi03019
]
118087417 (ZC3H12A)
Messenger RNA biogenesis [BR:
zvi03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
118087417 (ZC3H12A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
Regnase_1_C
UBA_6
zf-CCCH_2
zf-CCCH
zf-CCCH_4
UBA_N4BP1
Motif
Other DBs
NCBI-GeneID:
118087417
NCBI-ProteinID:
XP_034975924
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All DBs
Position
LG6:41455351..41468773
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AA seq
656 aa
AA seq
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MNLGGLSTAPPGGFARWPDPLPLAKCLGGSGQEEPGGSSMQESGYMSLKGPSPEESDADL
ESWSSLEQDTTEMQMKVDFFRKLGYSSEQILAVLQKHGLNADTNTVLGELVKHGMAVGER
DPAEAPQEAPEAPLVPRGGAANQSPTRATPLEGKDGENLRPIVIDGSNVAMSHGDKDVFS
CQGIFLAVKWFLDRGHTDITVFVPSWRKEQPRPDVPITDQHILRDLEEKRILVFTPSRRV
GGKRVVCYDDRFIVKLAYESDGIVVSNDVYRDLQAERPEWKKFIEKRLLMYSFVNDKFML
PDDPLGRHGPSLDNFLRKKPVVPEHKKQQCPYGKKCTYGVKCKFYHPERLNQLQRSVADE
LRANARLSPTRGVLTSKEERGSRQPSQVEALGSLPPESEKTPFQKASVDKKSSTHKAKHG
EGPTHLLLKGTPHKSGGGGTYRPAEWYQPPPPASPHMDSLSYVSQEQFDSGIGSLESQLS
EMWPSPPGSHSAHPHHCMGQRPAYPHPLGPESNSYNCYQPQGYHKSVAGSGAGFLPYNPE
VPSSSARALPPSLPGYSLPADSRASLELGPKYWSEPYQPTAPREGLRGHQLPYDKASCQW
AATDHFAKERANVHTRLCGIFHPHLVDAVMSRFPQLLDPQQLAAEILTYKSQNPRV
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atgaacttgggtggcctttccactgcccctccgggtggctttgcccgctggcctgaccct
ctgcccttagctaagtgccttggtggcagtgggcaggaggagcccggggggagctccatg
caggagagtggctacatgagcctgaagggcccaagcccagaggagtctgacgcagacctg
gagtcgtggagctccttggagcaggacaccaccgaaatgcagatgaaagtggatttcttc
cgcaagttgggctactcctccgagcagatcctggccgtcctccagaagcacggcctgaac
gctgataccaacacagtccttggggagctggtcaagcatgggatggccgtgggggagagg
gaccctgctgaggcgccccaggaggcccccgaggcaccgctggtcccacgagggggtgca
gcaaaccagagccccacccgtgccacacctctggagggaaaggacggagagaacttgcgc
cccatcgtcatcgacgggagcaacgtggccatgagccatggggacaaagatgtcttctcc
tgccagggcatctttctggcagtgaagtggttccttgaccgaggacacacagacatcact
gtctttgtgccgtcctggaggaaggagcagccgaggcctgacgtcccaatcacagaccag
cacatccttcgcgaccttgaggagaagaggatccttgtcttcacgccttcccggcgcgtg
gggggcaagcgggtggtctgctacgacgaccgcttcatcgtgaagctggcctacgagtcg
gacggcatcgtggtctccaatgacgtctaccgagacctgcaggcggagcggcccgagtgg
aagaagttcatcgagaagcgtctgctgatgtactcgttcgtcaatgacaagttcatgctt
cccgatgatccacttgggcgtcacggacccagcctggacaactttctgaggaagaagccg
gtggttcctgagcacaagaagcagcagtgcccttatgggaagaaatgcacctacggcgtc
aagtgcaagttctaccacccggagcgcctcaaccagctgcagcgctccgtggctgatgag
ctccgcgccaacgccaggctctccccgactaggggcgtgctaacatccaaggaggagagg
gggagccggcagccctcccaggtagaagccttgggctccctgccccctgagagtgagaag
accccctttcagaaggcttccgtggacaagaaaagctccacccacaaagccaagcacggg
gaaggccccacacacctcctgctcaaagggacccctcataagagcggcggcggtggcacc
taccggcctgcagagtggtaccagccgccgcctcccgcctctccccacatggactccctt
tcttacgtgtctcaggagcagttcgactctggcatcggctccctggagagccagctgtct
gagatgtggcccagccccccaggcagccacagcgctcacccccaccactgcatggggcag
aggcctgcctacccgcaccctctgggccctgagtcaaatagctacaactgctaccagccc
cagggctaccacaagtccgttgcgggctctggcgccggcttcttgccctacaacccagag
gtgccttcctcctctgccagggccctccctccctccctgcctggatacagcctgcctgct
gactcaagggcttccctggagctggggcccaagtactggtccgagccctaccagccaaca
gcccccagggaggggctgaggggccaccagctgccctacgacaaggcctcctgccagtgg
gctgcaacagaccactttgccaaggagcgtgccaacgtgcacacccgcctgtgcgggatc
ttccaccctcacctagtggacgcggtcatgagccgcttcccacagcttcttgacccccag
cagctcgctgctgaaatcctcacttacaagtcccaaaaccccagggtgtga
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