Zootoca vivipara (common lizard): 118087494
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Entry
118087494 CDS
T07275
Symbol
NPAS1
Name
(RefSeq) neuronal PAS domain-containing protein 1
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
zvi
Zootoca vivipara (common lizard)
Brite
KEGG Orthology (KO) [BR:
zvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zvi03000
]
118087494 (NPAS1)
Transcription factors [BR:
zvi03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
118087494 (NPAS1)
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GFIT
Motif
Pfam:
PAS_3
bHLH_HIF1A
PAS_11
PAS
PAS_9
PAS_4
HLH
Motif
Other DBs
NCBI-GeneID:
118087494
NCBI-ProteinID:
XP_034976086
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Position
LG6:18245819..18316398
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AA seq
847 aa
AA seq
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MAALYGSEVKCVSVEWDFLQGLLVKNQPVPCLQALRKEKSRNAARSRRGKENFEFYELAK
MLPLPGAITSQLDKASIVRLTISYLKMRDFANHGDPPWSLRAEGPSPPGKAAGRRNVNTL
LTELFEQHLGGHILQSLDGFVFALNQEGKFLYISETVSIYLGLSQVELTGSSIFDYVHPG
DHPEVAEQLGLKPPSETSHPTRQKAPTLATATSSSGLTETSESDPASSHSAEGDALDRSF
FIRLKSTLTKRGLHVKTSGYKVIHVTGRLRPRLPSFSHTHSMLGRVMGLVALAHTLPPST
LSEVRIECHMFVFRVNMDLQIVYCESRISDYMDLTPSELVGKSCYRFIHGEDVEGIRQSH
LDLLNKGQVVTQYYRWLQKNGGFVWVQSCATISVNVKNPTEKNMVWVNYILSKPECKNTV
LDIFQLPGIPVRQMEAVEVGPEFKESSLAKESSHGRKLYSPSKPGSLAEAYPRSAAEAGA
QCRLAETDSSGPETSYREEELSDGGAGSDEERPPSKRIKLEFQPESPRREAKEASSEESD
SGSESELGLLPQQRAPLARKANGCKAGGRRSGGPSRPCTSEFASVIQTQKSSVLKASPAL
SIKSEQPPGAKGAPWTCPAAHNGSPYTVNKALSLEKPSLRPASSHLYVSIPDSVLTPPEM
ESGAPKGPFGTSPRTIPAASSSADTLSPPLSGSPCEERATPTPFTPLLYPADMEVLQRFH
AGNVVVPLVHQLSSPHASTSGSQGLYATSTIRYAPADMTLGMQNNMLPPSHPINLMDIGS
AEAKTSRELMYHHLQRLNMVAPFGNSAGLAQISGGAFAATDSLFSTLPFSMAGSGVHGAS
ALERKED
NT seq
2544 nt
NT seq
+upstream
nt +downstream
nt
atggcagccctgtacggcagtgaggtgaaatgcgtcagcgtggaatgggatttcctgcaa
ggcttattagtgaagaaccagccagtgccttgcctccaggccctgcgcaaggagaagtcc
cggaacgctgcacgctcccgccggggcaaggagaacttcgagttctacgaactggccaag
atgctgcctctgcccggagccatcaccagccagctggacaaggcctccatcgtccggctc
accatcagttacctcaagatgcgcgactttgccaaccacggagacccgccctggagcctg
cgggcagaagggccttccccgcctggcaaagctgctggccggaggaatgtgaacaccctg
ctaacagagctctttgaacagcacttagggggccacattctgcagtctctggatgggttt
gtgtttgcactgaaccaggagggaaaattcctttacatctccgagacggtgtctatttac
cttgggctctcgcaggtggagctgacggggagcagcatcttcgattacgtccaccctgga
gaccaccctgaggtcgctgagcagctaggcctgaagcctccctcggagacgtctcacccg
acgcgccagaaagcacccactctggccactgccacctcttcttctgggctgacggagacc
tctgaatctgatccagccagctcccattctgctgagggcgacgctttggaccgctccttt
ttcatccgtctgaaatccaccctgaccaagagagggcttcacgtgaaaacttctggctac
aaggtgatccatgtaacgggccgcctccgcccccggctgccgtccttctcccacacccac
tccatgctgggccgcgtgatggggctggtggcgctggcccacaccctgcccccttccacg
ctcagcgaggtgcgcatcgagtgccacatgtttgtcttccgggtcaacatggacttgcag
atcgtgtactgcgagagcaggatcagcgattatatggacttgaccccctcggagctcgtg
ggcaaaagctgctaccgattcattcacggcgaggatgtggagggaatccggcaaagtcac
ctggacttgttaaacaaggggcaggtggtgacccagtattaccgctggctgcagaagaac
gggggcttcgtgtgggtccagtcgtgcgccaccatctcggtcaatgtcaagaaccccacc
gagaagaacatggtctgggtgaactacatcctcagcaagccagagtgtaagaacaccgtg
ctggacatcttccagctgcctgggatccccgtgaggcagatggaggccgttgaggtgggg
ccagaattcaaagagagcagccttgccaaagagagcagccatgggaggaagctttactcc
cccagcaaacctggctccctagccgaggcctacccccggagtgcagcggaggctggtgcc
cagtgccgcctggcagagaccgattccagtggccccgaaacgagctaccgagaggaggag
ctgtcggacggaggtgccgggagcgacgaggagagaccgcccagcaagcgcatcaagctg
gagttccagccagagagcccacggcgagaagcaaaggaggccagctccgaggagtcggac
agtggcagcgaatctgagctgggcctcctcccgcagcagagggcaccgctggcgaggaaa
gccaacggctgcaaggccgggggacggaggagcggagggcccagccgcccctgcacatcg
gaatttgcctcagtcatccagactcagaagagctccgttctgaaagccagcccagcactt
agcattaaatctgagcagcccccaggagccaagggagccccctggacctgtcctgccgcc
cacaatggcagcccttacactgtgaacaaagcacttagcttagagaagccctctctgcgg
ccagcctcttctcacctgtacgtctccatcccggactctgtcctcaccccgcccgagatg
gagagcggcgccccaaaagggcctttcggcacctctccccggaccatcccggcagcctcc
tcttcggcggacactctctcgcccccgctctcgggctccccatgcgaggagagggccacg
cccacgcccttcacaccgctcctctaccctgctgacatggaggtgctgcaacggttccac
gcgggcaacgtggttgtgccactggtgcaccagctcagcagcccacatgccagcacatcc
ggctcgcagggcctttacgccaccagcacgatccgatatgccccagccgacatgacgctc
ggcatgcagaacaacatgctgccgccttcccaccccatcaacctcatggatatcggcagc
gccgaggccaagacatcccgggaacttatgtaccaccacctgcagaggttgaacatggtc
gcgcccttcgggaactcggcaggcttggcccagatttcaggcggagcttttgctgcgacg
gactccttgttttccacgctgcccttctcgatggctggcagtggggtccatggtgcctcg
gctttggaacgcaaggaggactga
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