Zootoca vivipara (common lizard): 118087710
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Entry
118087710 CDS
T07275
Symbol
DDX56
Name
(RefSeq) probable ATP-dependent RNA helicase DDX56
KO
K14810
ATP-dependent RNA helicase DDX56/DBP9 [EC:
5.6.2.7
]
Organism
zvi
Zootoca vivipara (common lizard)
Brite
KEGG Orthology (KO) [BR:
zvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
zvi03009
]
118087710 (DDX56)
Enzymes [BR:
zvi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
118087710 (DDX56)
Ribosome biogenesis [BR:
zvi03009
]
Eukaryotic type
Pre-60S particles
Helicases
118087710 (DDX56)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Motif
Other DBs
NCBI-GeneID:
118087710
NCBI-ProteinID:
XP_034976529
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All DBs
Position
LG6:88305345..88314808
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AA seq
557 aa
AA seq
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MEGEAASFAHLGLDARLLQATAELGWAKPTLIQEKAIPLALEGKDLLARAKTGSGKTGAY
ALPLLQHLLRGKASVLVAEQAVRGLILVPTKELGQQVLQMLRQLTSYCARDLHLVDISGQ
ADLATQRPILMEKPDVVVGTPSRVLAHLKAGSLSLQDSLEILVLDEADLLFSFGFEEDLK
SLLCHLPKIYQTFLMSATFNEDVEALKELVLHNPVTLKLQESQLPDSSKLSQFQIRCETE
DDKFLLLYALLKLSLVKGKVILFVSTIDRCYRLKLFLEQFSIPACVLNSELPIQSRCHII
SQFNRGFCDYIIATDEQDLAEKEGPTGRKRKRKGNKAGKGKDQEYGVSRGIDFQNVSAVL
NFDFPPSVESYIHRAGRTARADNPGTALTFVLPSEKAVLAEIEAALTGGGSDDTPLRPYL
FRMEEIEGLRYRCQDAMRSVTKQAIKEARLREIKEELLNSEKLKTYFEDNPRDLDLLRHD
KPLHPAIVKPHLRNIPAYLVPPTLRAVAQPLGSKRRRRKPLPPRTRGQRNPLRSFKCTKR
RSGAPAKHQRAAGTPGS
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atggagggagaagcggccagcttcgcgcacctcgggctggacgcgcggctcctgcaggcg
acggcggagctcggctgggcgaagccgacgctgatccaggagaaggccatcccgctggcc
ctggagggcaaagacctgctggcgcgggccaagacgggctccggcaagacgggcgcctac
gccctgcccctcctccagcatctgctccgggggaaagcgtcagtgctggtagcagagcag
gccgttcggggactcatcctggtccccaccaaggagctgggtcagcaggtgctgcagatg
ctccggcagctaacctcctactgtgcccgagacctgcacctcgttgacatctctggccag
gcggacttggcaactcagagacccatcttgatggagaaaccggatgttgtggtggggacg
ccatcgcgggtcctggctcacttgaaagctggcagcctgagcctgcaggattccttggaa
atcctggtgttggatgaagctgacctccttttttcctttggctttgaggaagatttgaaa
agtctgttgtgtcacttacccaagatctaccagacgttcctcatgtctgctaccttcaat
gaagatgttgaggccctaaaggagctggtgctccacaaccctgtgaccctgaagctgcag
gaatcgcagctgccagacagctccaagctgagccagttccagatccggtgcgagacggag
gacgacaagttcctgctgctctatgcactactgaagctttcgctggtgaagggcaaagtc
atcctctttgttagcaccatcgaccgctgctaccgcctcaagctcttcctggagcagttc
agcatcccagcctgtgtcctgaactccgagctgcctattcagtccaggtgccacatcatc
agccagttcaatcggggcttctgtgattacatcatcgccaccgacgaacaggacctggca
gagaaagagggaccgacaggaaggaagaggaagaggaagggcaacaaagcaggaaagggc
aaagaccaggaatatggagtatcgcgtgggatcgacttccagaatgtctctgctgtcctg
aactttgacttccctccctcagtagagtcctacattcaccgagcaggcaggactgcccgt
gcggacaacccgggcactgcccttacctttgtgctgccctctgagaaggctgtgctggct
gagatcgaggcggctctcacaggaggaggcagtgacgacactcccttgcggccctacctg
ttccggatggaggagattgagggcctccggtaccgttgtcaggacgccatgcggtccgtc
accaagcaggccatcaaggaagctcgcctccgggagatcaaggaggagctgctcaactct
gagaagctgaagacatacttcgaggacaatccccgggacctggacctcctgcggcacgac
aagcctcttcacccagccattgtcaagccccacttgcgaaacataccagcgtacctggtg
cctcccaccctccgggctgtggcgcagcccctgggcagcaagcgcaggcgacggaagccg
ctgccacccaggaccaggggccagcggaatcccctgcggagtttcaagtgcacgaagcgg
agatctggagctccagccaagcaccagagggccgctggaacgcctggatcctga
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