Zootoca vivipara (common lizard): 118087999
Help
Entry
118087999 CDS
T07275
Symbol
ARID1A
Name
(RefSeq) AT-rich interactive domain-containing protein 1A
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
zvi
Zootoca vivipara (common lizard)
Pathway
zvi03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
zvi00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
118087999 (ARID1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zvi03000
]
118087999 (ARID1A)
03021 Transcription machinery [BR:
zvi03021
]
118087999 (ARID1A)
03036 Chromosome and associated proteins [BR:
zvi03036
]
118087999 (ARID1A)
Transcription factors [BR:
zvi03000
]
Eukaryotic type
Helix-turn-helix
ARID
118087999 (ARID1A)
Transcription machinery [BR:
zvi03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
118087999 (ARID1A)
Chromosome and associated proteins [BR:
zvi03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
118087999 (ARID1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
118087999
NCBI-ProteinID:
XP_034977035
LinkDB
All DBs
Position
LG6:complement(32854577..32941416)
Genome browser
AA seq
2274 aa
AA seq
DB search
MAAQVAPAAASSLGAPAPSELKKAEVQQRDCSSEEAGGEAAAAERGGEKQSESEGPPGKE
LQDGAESNGGGAGAEPDLKSSNGNPGPRPVATLNNNLPEPPGGGGGGVSGGSNSSDGVGT
PQQQPPPQQQQPPPTHPAALPPPAYGFGQPYGRGAQAAAAVAAAAAFHQHGGQQSPGMAA
LQSGGLEQPYSGPTGGPPGPPPPQNSHGGGSSEHGFPNHQYNNYYPTAGRSAGAYPSPSQ
AYALSSPRGNAQSPAQAGAKPPASAFQQQRFGAMGPSAAAVGAGGSAGGGSGGGATPQST
STPTLNQLLTSPSSARGYQGYPGADYGSGPQDGGATAKAPAAADIASQYTGGTSQGWAAA
ATGGQQRSHHAPMSPGSSSAGGGQPLTRTQQPSSPMDQMGKMRPQPYGGNNPYSQQQGPQ
SGQQQGHGYPGQPYGTPQRYPMGTLSRTQTAMGTVSYAQQIPPYGQQGPSGYGQQSQTPY
YNQQSPHPQQQQQQPSYAQQPPSQTPHAQPSYQQQQTQSQPPQLQSSQPPYSQQQSQPPH
QQSPSPYPQQSAAAQQHPQSQPPYSQQQSQSPYQQQQAQQSATSALSQQSASYSQSQSQQ
QSAYSQQRFPPPQELSQDSFGSQASSAASMASSKGQDDVNLNLQSRPSSLPDLSGSIDDL
PMGTEGALSPGVSTSGISSSQGEQSNPAQSPFSPHTSPHLPGIRGPSPSPVGSPASVAQS
RSGPLSPAAVPGNQMPPRPPSGQSDSILHPSMNQSTITPDRGYIQRTPQMPQYNSPQPGS
ALSPRQSSGGQMHAGMGPYQQNSMGSYGPQGGQYGPQGGYPRQPNYNAMPNANYPSPGMG
GTMNPMGAGSQIHGQTGVPPYPGLPPGRGLSHAAMGNRPYGPNMANMPPQVGTGMCPPPG
GRKAQEAAAAAMHAAAVNSIQNRPSGYPHINQGGMMGTGPPYGQGINSMAGMLNPQGPPY
PMGGNMANNSAGMAASPEMMGLGDVKLTPAPKMNNKADGTTKTESKSKKSSSSTTTNEKI
TKLYELGGEPERKMWVDRYLAFTEEKAMGMTNLPAVGRKPLDLYRLYVSVKEIGGLTQVN
KNKKWRELATNLNVGTSSSAASSLKKQYIQCLYAFECKIERGEDPPPDIFATDSKKSQPK
IQPPSPAGSGSMQGPQTPQSTSSSMAEGGDLKPPTPASTPHSQMPPLQGIRSNSVGLQDT
FPDGSDPTFQKRNSMTPNPGYQPSMNTSDMMGRMSYETKDPYGSMRKGSDPFMSSGQGPN
SGMGDPYNRATGPGMTNMAMGQRQHYPYSPYERVRTEAGMGPETNLGTGTPQPNIMPSTP
DSGMYSPSRYPQQPQQRHDSYGNQFPTQGTSSSSPFPSQQTTLYQPQQQNYKRPMDGNYG
PPAKRHEAELYNVPYSTGQGQAQQQLPPAQTQQPSQQQTAQPSSQQEIYNQYPNTYPATD
RRPAAGPQNQFPFQFVRERVSAPPGSSTQQNIAPQMMGGPIQSTPEGPQQGTMWQGRNEM
SYSYPNRQSSGSAPQGPAYHGVNRTDEMLHPDQRVNHEGPWPSHGNRQPPYGPSAPVPPM
TRPPQPNYQTPPSMQNHIPQVSSPAPLPRPVENRTSPSKSPFLHSGMKMQKAGPPVPASH
ITPAAVQPPMIRRDITFPPGSVEATQPVMKQRRRLTTKDIGTPEAWRVMMSLKSGLLAES
TWALDTINILLYDDNSIMTFNLSQLPGLLELLVEYFRRCLIEIFGILKEYEVGDPGQRTL
LDPERVSKSSSPPPEEGDKEESQIPNCEEEEEGEEEAAFANKATAPLESNEEKLVSKFDK
LPVKIVQKNDPFVVDYSDKLGRVQEFESGLLHWRIGGGDTTEHIQTHFESKMELSLTHKR
APCNSILRKHSVAESNPVAREGVSPPSDSPPEKRITATMDDMLSARPSSLAEEEGVRNVE
VAKESSKFPFGISPAQSHRNIQILEDEPHSKDETPLCTLLDWQDSLSKRCICVSNIIRSL
SFVPGNDFEMSKHPGLLLILGKLILLHHKHPERKQAPLTYEKEEEQDQGVSCNKVEWWWD
CLEMLRENTLVTLANISGQLDLSPYPESICLPILDGLLHWAVCPSAEAQDPFPTLGPNAV
LSPQRLVLETLSKLSIQDNNVDLILATPPFSRLEKLYSTMVRFLSDRKNPVCREMAVVLL
ANLAQGDSLAARAIAVQKGSIGNLLGFLEDSLAATQFQQSQASLMHMQNPPFEPTSVDMM
RRAARALLALAKVDENHSEFTLYESRLLDISVSPLMNSLVSQVICDVLFLIGQS
NT seq
6825 nt
NT seq
+upstream
nt +downstream
nt
atggccgctcaggtggcccccgccgccgcgagcagcttgggtgccccggctccatccgag
ctgaagaaagcggaggtgcagcagcgggattgttcgtcggaggaggcggggggcgaggcg
gcggcggcagagcgcggcggagagaagcagtcggaaagtgaaggtcccccgggaaaggag
ctgcaggacggggccgagagcaatggcgggggcgccggggccgagcccgacctgaagagc
tccaacgggaacccgggccctaggcccgtcgccacactgaacaataacctcccggagccg
cccggcggtggtggcggcggcgttagtggcggcagcaacagcagcgacggggtggggacg
ccgcagcaacaaccgccgccgcagcagcagcagcctccccctactcatccggccgccttg
cccccgccagcctacggtttcgggcagccctacggtcgaggcgcccaggctgcagcggcc
gtcgccgcggccgctgccttccaccaacatggcggacaacaaagccctggcatggcagcg
ctgcagagcgggggcctggagcagccgtattcggggcccaccgggggccccccggggccg
ccccctccccagaactcccacggcggcggcagttcggagcacggcttccccaaccaccag
tacaacaactactaccctacagccgggcgcagcgctggcgcctacccgtctccctctcag
gcctacgccctgagctcccctcggggaaacgctcagagccccgcgcaagccggggccaaa
cctccagcttcggcattccagcagcagcgtttcggggccatggggccctcggccgccgcc
gtcggcgcaggaggaagcgcaggaggaggcagcggcgggggcgccaccccgcagtccact
tccacccccaccctcaaccagctgctcacctccccaagctcggctcggggctatcaaggg
tatcctggggctgactacgggagcgggccccaggatgggggagcgacggccaaggccccg
gcagcagcggacattgcctcccagtacactgggggcaccagccaaggctgggcggcagca
gccacaggaggccaacaaaggagtcaccacgcgcccatgagccccgggagcagcagcgct
ggagggggacaaccgctcacccggactcagcagccatccagcccaatggatcagatgggg
aagatgagacctcagccttatggaggaaacaacccatactcacaacagcagggacctcag
tcagggcaacagcagggccatggatatccaggacagccgtatgggactccccagagatac
ccaatgggaactctaagcaggacacaaactgcaatgggcaccgtctcttatgcacagcag
atcccaccttacggacagcagggacctagtggatatgggcagcagagccagactccctat
tacaaccagcagagtccccatccccagcagcagcagcagcagccttcctatgcccaacag
ccgccatctcagacccctcacgcccagccttcttatcagcaacagcaaactcagtctcag
cccccgcagctccagtcatcccagcctccatactcccagcagcagtcgcagccaccacat
cagcagtctccatctccgtatcctcagcagtcagcggctgcccagcagcatccacagagt
cagcctccctactcccagcagcagtcacagtcaccctaccagcagcagcaagctcagcag
tctgctacctcggcgctttctcaacagtctgcatcttactctcaatctcagtcgcagcag
cagtcggcatattctcagcagcgcttcccacctccacaggagttatcacaagactcgttt
gggtcccaggcatcatcggctgcctcaatggcttccagtaaagggcaagatgatgtgaat
ttgaatcttcagtccagaccctctagcttgccggatctctctggttcaatagacgatctg
cccatgggtacagaaggagcactgagtcctggcgtaagcacatcagggatttctagcagt
caaggagagcagagtaaccctgctcagtctcctttctctccgcatacctctcctcacttg
ccaggcatcagaggaccttccccttcaccagttggatctcctgctagtgttgctcagtca
cgctctggcccactgtctcctgctgcagtaccaggtaaccagatgccacctcgaccgcct
agtggccagtcagacagcatcttgcatccctccatgaatcagtcaaccataacccctgat
agaggttacatacagaggactccacagatgccccagtataattcccctcagcctgggtcg
gccttatctccacgtcagtcttctggaggacagatgcatgctgggatgggaccttaccaa
caaaattccatgggcagttatggacctcaggggggtcaatatgggcctcaaggtggatat
cccaggcagccaaactacaatgctatgcccaatgcaaattacccaagcccaggaatggga
ggaaccatgaacccaatgggagcagggagtcagatccatggtcaaactggtgtaccaccc
tatcctgggcttcctccagggagaggattgagccatgctgccatggggaataggccctat
ggacccaacatggcaaacatgcctccccaagtagggactgggatgtgtcctccaccaggt
ggcaggaaagcacaagaagctgctgctgctgctatgcatgctgctgccgtcaactcaatc
cagaataggccatctggttacccccatattaaccaaggaggaatgatgggaactgggcct
ccctatggccaaggaattaatagcatggctggcatgctcaatccccagggcccaccatat
ccaatgggtgggaatatggccaacaattctgcagggatggctgcaagtcctgagatgatg
ggactcggggatgttaaactaacaccagctcccaaaatgaataataaggcagacggaacc
accaaaactgaatccaagtcgaagaaatccagctcctctactactacaaatgaaaagatt
actaaactctatgagctgggtggtgagccagagagaaagatgtgggtagatcgctatttg
gctttcactgaagagaaagcaatgggcatgaccaatctacctgctgtgggccggaaaccc
ctagacctgtatcggctctatgtctctgtgaaggagatcggagggctgactcaagttaac
aaaaacaagaaatggcgtgagttagcaaccaatttgaatgtgggtacctccagcagtgca
gctagctctctgaagaagcagtacatccagtgtctctatgcctttgagtgcaagattgag
cgaggagaagatcctcccccagacatctttgcaactgattcaaagaagtcacaacccaaa
atacagcctccatctccggctggttcaggctccatgcagggccctcagacacctcagtcc
accagtagctccatggcagaaggaggagacttgaagcccccaactcctgcatctacgcca
cacagtcaaatgccccctttgcaaggcatcaggagtaactcagtaggccttcaggacacc
tttcctgatggcagtgaccctactttccagaagaggaactccatgactccaaacccaggg
taccagcccagcatgaatacttccgacatgatgggtcgtatgtcctatgaaacaaaggat
ccatatggcagtatgagaaaaggaagtgatccctttatgtcctcagggcagggccccaac
agtggtatgggtgatccttataatcgtgctacaggtccagggatgactaatatggccatg
gggcagaggcagcattatccttatagcccttatgagagagtgaggactgaagctggaatg
ggacctgaaaccaatttaggaaccggaacaccccagcccaacatcatgccttccactcct
gattcagggatgtactccccaagccgataccctcagcagccacagcagcgacatgattcc
tatggcaatcaatttcccactcaaggtacatcctccagcagcccctttcctagccaacaa
accaccctatatcagccacaacagcagaattataagcgaccgatggatggcaactatggc
cccccagccaaacgacacgaagcggagctgtacaatgtaccgtacagcacaggccaggga
caggctcaacagcagctgcctccggcacaaacccaacaaccaagccagcagcaaactgct
cagccttcttcacagcaggaaatctataaccagtatccgaacacataccctgccacagat
cgccgacctgctgctgggccacagaaccagttcccattccagtttgtcagagagagggtc
tctgctcccccaggctctagcacacagcagaatattgctcctcagatgatgggtgggccc
atacagtccactccagagggcccacagcagggcaccatgtggcaagggcgtaacgagatg
agctacagctatcccaaccggcagagttctggttctgcaccccagggtcctgcatatcat
ggagtgaatcgaacagatgaaatgctacatccggatcagagggttaatcacgaaggaccg
tggccttctcatggaaaccgccagcctccttatgggccctctgcccctgtacccccaatg
acaaggccaccccagcccaactaccagaccccacctagcatgcagaatcacattcctcag
gtatctagtccagcacctcttcccagaccagtggaaaaccgcacctctccaagtaaatct
ccattcctgcactcaggaatgaagatgcaaaaggcggggcctcctgtccctgcctcacat
ataacaccagcagctgtacaacctcctatgatacgacgggacatcacattcccacctgga
tcagtggaagctacacagcctgtgatgaaacaaagacgacgtctgaccacaaaagatatt
ggaacacctgaagcatggagagtaatgatgtctctgaaatctgggttactggctgaaagt
acgtgggctttggataccataaacatcctgctgtatgatgacaacagcataatgaccttc
aaccttagccagctgccagggttgttggagctactagtggaatatttccgacgatgcctg
atagaaatatttggaatcctgaaggaatatgaggtgggagatccagggcagagaacacta
ttggatcctgagagggtcagcaaatcttcgagtcctcctcctgaagagggggataaagag
gagtcacagattcctaactgtgaggaggaagaggaaggggaggaggaggctgcctttgca
aataaagccacagcacctcttgagagcaacgaggaaaagctagtcagtaaatttgacaag
cttccagtcaagatagtgcagaagaatgacccatttgtggtagattattctgacaaactt
ggccgggtacaggaatttgagagcgggctgctgcactggcggattggtgggggagacacc
actgaacacattcaaacccactttgaaagcaaaatggagctgtcgttgactcacaagcga
gctccttgcaactctattttgcgaaaacattctgtagctgagagcaaccctgtcgcccga
gagggagtatcccctccatctgacagtcctccagagaaaaggataacggctaccatggac
gacatgctttcagcacgacccagctcattggcagaggaggaaggagtaagaaatgtggag
gtggctaaggaaagcagtaaattcccatttggcattagtccagctcagagccacagaaac
atacaaatcctggaggacgaacctcacagtaaagacgagacgcccctctgcacacttcta
gactggcaggattcattgtccaaacgttgcatctgtgtgtctaacatcatcaggagttta
tcatttgtgccaggcaatgactttgagatgtctaaacaccctggtctgctgctgatctta
gggaaactgattctcctgcaccataagcatccagaacgcaagcaggcgccactgacatat
gagaaagaggaggagcaggaccaaggagtgagctgcaacaaagtggagtggtggtgggac
tgcttggagatgcttcgtgaaaacactttggtcacattggccaacatctctggccagctg
gacctttcaccataccccgagagcatctgtttgcctatcctggatggactcctccattgg
gcagtgtgtccttcagcagaagcccaagatccttttccaaccctggggcctaatgctgtt
ctctcccctcaaagactggttttggaaaccctcagtaaactcagcatccaggataacaat
gtggatttgatccttgcaacgccacctttcagtcgcttggagaaactctacagcaccatg
gtccgtttccttagtgaccgaaagaacccggtgtgtcgggagatggctgtggtactactg
gccaacttggcgcagggcgacagcttggcagctagagccattgctgtgcagaagggcagc
attggcaacttgttaggcttcttggaggacagcctggcagccactcagtttcaacagagc
caagccagtttgatgcacatgcagaaccctccctttgagccgaccagtgtggacatgatg
cgtcgggcagctcgagcgctgctcgccctggccaaagtggacgagaaccactctgagttc
acgttatatgagtcacggctgttggacatctccgtgtcacctctgatgaactcgttggtt
tcacaagttatttgtgatgtactgtttttaattggccagtcatga
DBGET
integrated database retrieval system
