Zootoca vivipara (common lizard): 118088011
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Entry
118088011 CDS
T07275
Symbol
CHD9
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 9 isoform X1
KO
K14438
chromodomain-helicase-DNA-binding protein 9 [EC:5.6.2.-]
Organism
zvi
Zootoca vivipara (common lizard)
Brite
KEGG Orthology (KO) [BR:
zvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
zvi03036
]
118088011 (CHD9)
Chromosome and associated proteins [BR:
zvi03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
118088011 (CHD9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Helicase_C
Chromo
ResIII
DEAD
HDA2-3
HTH_CHD1_Hrp3
Motif
Other DBs
NCBI-GeneID:
118088011
NCBI-ProteinID:
XP_034977057
LinkDB
All DBs
Position
LG6:64341262..64429487
Genome browser
AA seq
2891 aa
AA seq
DB search
MTDPMMDFFDDANLFSDTLEGLSDDAFVQTGPVSLVDELNLGAEFEPLHIDSLNHVQETQ
TQQKINEFGQLNQYDSLKLQVNQSFSSPAENVLSPHTEFNCSPIHPQSQTNGMFPDVADG
SPMWGHQTSSSVSNQNGSPFHQGRSQSMQQNKSFVAHHDFALFQASEQHHPCASLQSKQN
RNGINAGEDTQSQSENFMEVNASVPHRTSVSHAPQGATLSDSQQCISAQQFSQTTSNSPH
FCGNQEGNFDGHSSTITPCSVVNTQFSPPYSYSSNHVSPTSLLQSSTALSVSQQTHSLSD
FPESDAFVPQIGTKQENTDNLLNSSPSLNSNNFHVLHSAHPRGSFSSSKLSAVNINFSAP
AGSGPQLSYFSDPIEGNGFSSLDENLLHQVESQAESFTELDPETLLQEDLLPQFNESTFV
QDSSSNELEHHLEHHVTPQVTEPSHLVRTQSQNCNHPWYPPSSNQHLQERKRVNVQGQPP
SSKKTDGSGTYAKLQNTQVKSMSEKKQKKKVESESKQEKANRIISEAIAKAKERGERNIP
RVMSPENFPSVSAEVREEKKGRKVKSKPKDKESKKPKTGSSSKTKERAKIGKIIITLGKK
QKRKNESSDEMSDAKQTTQQSFKDEISQKRRSNRQIKRKKYAEEGEGKQSEEETKVSVKI
KKNSVPLPAEQPLQLFVENPSEEDAAIVDKILSSRIIKKEIPGGATVEAEEFFVKYKNYS
YLHCEWATEQQLLKDKRIQQKIKRFKLRQAQRAHFFADMEEEPFNPDYIEVDRVLEVSFC
EDKDTGEPVTYYLVKWCSLPYEDSTWELKEDVDQGKIEEFEQLQALRPDSRRLDRPPSNS
WKKIELSREYKNGNQLREYQLEGLNWLLFNWYNRQNCILADEMGLGKTIQSITFLYEILR
TGIRGPFLIIAPLSTIANWEREFRTWTDLNVVVYHGSMVSRQMIQQYEMYFRDSQGRIIR
GTYKFQAIITTFEMILGGCPELNAIEWRCVIIDEAHRLKNKNCKLLEGLKLMNLEHKVLL
TGTPLQNTVEELFSLLHFLEPLRFPAESTFMQEFGDLKTEEQVQKLQAILKPMMLRRLKE
DVEKKLAPKQETIIEVELTNIQKKYYRAILEKNFAFLSKGAGQANVPNLVNTMMELRKCC
NHPYLIKGAEEKILGEFRETYNPTAPDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIF
SQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLG
INLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLITRNSYEREMFDRASLKL
GLDKAVLQSMSGRENSVGGIQQLSKKEIEDLLRRGAYGAIMDEEDEGSKFCEEDIDQILQ
RRTKTITIESEGRGSTFAKASFVASGNRTDISLDDPNFWQKWAKKAEIDIDTISGRNSLV
IDTPRIRKQTRPFSSTKDELAELSDIESEGDDKPKLRRPCDRSNGYGRTECFRVEKNLLV
YGWGRWREILSHGRFKRQLNEQDVEIICRALLAYCLVHYRGDEKIKSFIWDLITPTEDGQ
TRELQNHLGLSAPVPRGRKGKKVKTQASTFDIHKAEWLRKYNPEHLLQDDGYKKHIKHHC
NKVLLRVRMLYYLKQEVIGNECSKVFDGVEASEIDIWVPEPDHSEVPAEWWDTEADKSLL
IGVFKHGYEKYNTIRADAALCFLERVGKPDDKAVAAEQRANDYIDGDVEDPEYKPAPAMF
KDDMEDDISSPGDLIITDGDGQMIEGDKLYWPTQSALTTRLRRLITAYQRTSKNRQTQQI
QPAFPVQACVMQNPYEEAALNPKMAAKIERQQRWTRREEADFYRVVSTFGVVFDPDRGQF
DWTKFRAMARLHKKTDESLEKYLYAFMAMCRRVCRLPSKDELVDPNIFIQPITEERASRT
LYRIELLRKVREQAVRHPQIFERLKLCQLNPDLPVWWECGTHDWDLLIGAAKHGVSRTDY
HILRDPELSFMSAQRNYSQSKVALPITPTPLLHQYQMVVSASPLAPQARLLDIKGNTLED
TKVKNENHKEDPHSSGEESIYTEDMRTGVKTEPLSPNNGTPSHATDQKPVVKADSDRRMV
AARTEPLTPNIASKKQRPNKRGSESSSDSDSDSDRSTCSSRSSSSSSSSSSSCSRSRSGS
SSSSSSSCSSASSSSSSSSSSSSSSSSSSSEESDSDEEESQKRPEGTPLLKAYDEESVAS
LSTVQDETQDSFQMNNGTPNSNCILQGGYMLAASYWPKDRVMINRLDSICQTILKGKWPS
ARRSYDSNTVASFYTTKLLDSPGAAAEPSEPSVPAPPSADVKEENDQSPQMSKVKKHVRE
KEFTVKINDEGGLKLIFQKQGLSQKRPFESEDGTLGQQQYLARLQELQNASETSLANFPK
SLPELGTSSQSTATANGIIVDDQPVMKKRRGRRKNVEGVDILFINRNKAPNHVCHSINVP
QVAPGINPALPYVPSHGVCDAESPVPVINLKDGTRLAGDDAPKRKDLEKWFNEHPGYVED
LGAFIPKMQLHEGRPKQKRHRCRNPNKLDINSLTGEERVQLINRRNARKVGGAFAPPLKD
LCRFLKENSEYGVAPEWADVVKQSGFLPESMFDRILTGPVVREEVSRRGRRPKSEIAKAA
AAAATATASIPVNPLLANGLLPGVDLSTLHALQQNLQNFQSLQVTAGLMGMPTSLNTAGE
AKNMAAVFPMLLSGMAGLPNLLGMGGLLTKSTESVSEEKKGNDSREPDGKKERTESQNAH
NGGENSVSGSPSTSSAAAAAASPLALNPLLLSNILYPGMLLTPGLNLHIPALSQSNIFDV
QNNENNGTGTAKQTEEKEENSRVKDQEDKRGAEPSSRNENSTDEGSEKADASSGSDSTSS
SSEDSDSSDED
NT seq
8676 nt
NT seq
+upstream
nt +downstream
nt
atgacagatcctatgatggacttttttgatgatgccaacctctttagtgataccttagaa
ggtttgtctgatgatgcttttgtacaaactggacctgtttcacttgttgatgaattgaac
ttgggtgcagagtttgaacctttacacatcgactcgttaaaccatgtgcaggaaactcaa
actcaacaaaagataaatgaatttgggcagctaaatcagtatgattcattgaaacttcaa
gtaaaccagtccttcagcagcccagctgaaaatgttttatcaccacacactgagtttaat
tgctcacccatccatccccaaagccaaaccaatgggatgtttcctgatgtggcagatgga
agcccaatgtggggacaccaaacttctagcagtgtttcaaatcagaatggatcccctttt
caccaaggtcgttcacaatctatgcagcagaacaaaagctttgtagcgcaccatgatttt
gccttatttcaggccagcgaacagcaccatccgtgtgcctcattgcagtcgaagcaaaac
agaaatggcatcaatgcaggagaggacactcaaagtcagtcagaaaacttcatggaggtt
aatgcgtctgttccacatagaaccagtgtttctcatgcacctcaaggtgctactctttca
gactcacaacagtgtatctctgctcagcaattttctcagactacaagtaactcacctcac
ttttgtgggaatcaagaaggaaactttgatggacactcttctactataactccatgctct
gttgttaatacacagttttcacctccttattcctactctagtaaccatgtctctcctacc
agtcttctacagtcttcgacagctctttctgttagtcaacaaactcattctctatctgat
tttccagagagtgatgcctttgttcctcagatagggaccaagcaagaaaatacagataac
ctccttaactcaagtccatctttaaattcaaataatttccatgtgttgcattcagcacat
cctcggggcagcttcagtagttcaaagctgtctgcagtgaacattaacttttctgcccct
gctggctctggtcctcagctgagctatttcagtgatcctatagaaggcaatggtttttcg
tctttggatgagaacttgcttcatcaagttgaatctcaagctgaatcatttacggaactt
gatccagaaactcttcttcaggaagatctccttccccagttcaatgaatctacattcgtg
caggacagctcaagtaatgagttagaacaccacctagaacatcatgttaccccacaagtg
acagagccctcccaccttgttcggactcagtctcaaaattgcaatcatccctggtatcct
cctagttctaatcaacacctgcaagagcgaaagcgtgtaaatgttcaagggcagcctcct
tcctccaagaaaacagatggttctgggacatatgctaagttgcagaatacccaggtgaaa
tctatgtctgagaaaaaacagaaaaaaaaggtggaatctgaaagtaagcaggagaaagct
aatcgcataatatcggaggcaatagcaaaagcaaaagagagaggggagcgaaacattcca
cgagtaatgagtccagaaaacttcccaagtgtttcagcagaagtaagagaggaaaagaag
ggcaggaaagttaaatcaaaaccaaaagacaaagaaagcaaaaaacccaaaactggctct
tcatccaaaactaaagagagagcaaaaattggcaagattattattactttggggaaaaag
caaaagagaaaaaatgagtcttcagatgaaatgtctgatgctaagcagacaactcagcag
tcattcaaagacgagatttctcagaagagaagatcaaatcgacaaattaaaaggaagaag
tatgcagaagaaggtgaaggaaaacaatctgaggaagaaaccaaagtttctgtcaaaata
aaaaagaattctgtccctttacctgctgagcagcctttacaattatttgtagagaatcca
agtgaagaagatgcagcaattgtagataaaattttatcttccagaatcataaagaaagaa
attcctgggggagcgacagtggaagccgaggaattttttgttaaatacaaaaactactcc
tacctccattgtgaatgggctactgaacaacagcttttaaaagataaaagaatccagcag
aaaatcaaacgtttcaagctgaggcaagcacaaagagcccatttttttgcagatatggag
gaagaaccttttaatcctgattatattgaagtagatcgtgtgttagaagtgtccttttgt
gaagataaggacactggagagcctgttacttactacttggtaaaatggtgctcattgcca
tatgaggacagcacatgggagctgaaagaagatgtagaccaaggaaaaatagaagagttt
gaacagctgcaagctttaagacctgattcaaggcggttggatcgacctccttctaattca
tggaagaagatagagctgtccagggaatataaaaatggcaaccaactcagggaataccag
ttagaagggctcaactggctacttttcaactggtataatagacaaaactgcattttagca
gatgaaatgggtcttggtaaaaccatccagtcaataacattcctctatgaaatcctccgg
actggtataagagggcctttcttgatcatagctccactttccaccatagccaactgggaa
agagagttccgcacgtggacagatcttaatgttgtggtatatcatggaagtatggttagc
aggcaaatgatacaacagtatgagatgtatttcagagattcacagggtcgcatcattaga
ggtacatacaagttccaggctatcattaccacatttgaaatgattcttggtggctgtcca
gaactcaatgccattgaatggcgctgtgttattattgatgaggcacacagattgaagaat
aaaaactgcaaacttctagaggggctcaaactcatgaatcttgagcacaaggtgctattg
acaggcacaccactgcaaaacacagtagaagaacttttcagccttcttcacttccttgag
cctttgcgcttcccagcagaatcaacattcatgcaagagtttggagaccttaaaacagag
gagcaggtgcaaaagttgcaagctatcctgaaaccaatgatgctaagaagactgaaggaa
gatgtagagaagaagctggcaccaaagcaggaaactattattgaagtggaattaacgaat
atccaaaagaaatattatcgagccattttagagaaaaacttcgcatttttgtcaaaaggt
gcaggccaagccaatgtacccaacttggttaacactatgatggaactcaggaaatgctgc
aatcatccatatcttatcaaaggtgctgaggaaaaaatcttaggagagtttagggagacc
tataatccaactgctcctgatttccacctgcaagcaatgatccagtctgctggaaaactg
gtcctcattgacaaacttcttccaaaaatgaaagcagggggccataaggtgcttattttc
tctcagatggttcgctgtcttgatatccttgaagattatctgatacataaaaggtacctg
tatgagcgaatcgatggaagagtaagagggaacttacgtcaggctgccattgatcgattt
agcaagccagactctgatcggtttgttttccttctctgtaccagagctggtggattaggc
attaatttaactgcagcggatacttgcataatttttgattctgactggaatcctcagaat
gatttgcaggcccaagctcgttgtcataggattggtcagaacaaagcagtgaaggtctac
agactaataactcggaactcttacgaaagagagatgtttgacagagcaagtctgaagctt
ggcctggataaggctgtcttacagagcatgagtggaagagaaaatagtgttggtggtatc
caacaactttctaaaaaagaaattgaggatttgcttcgaagaggtgcatatggtgccatt
atggatgaagaggatgagggttctaaattctgtgaagaagatattgatcaaatcttgcag
cgtcgcacgaaaacaattacaattgaatctgaagggaggggctccacatttgctaaggct
agctttgttgcatctggaaataggacagatatttcattagatgatcccaacttctggcag
aagtgggccaaaaaagcagaaatagacatagacaccatcagtggtagaaatagcttggtt
attgacacgcctagaattaggaagcaaacaaggcctttcagttctacaaaggatgaactt
gctgagctatctgacattgaaagtgaaggggatgataaaccaaaacttcggaggccttgt
gaccgctccaatggatatggaagaacagaatgttttagggtggaaaaaaacctgctagtt
tatgggtggggccgttggagagagattttgtcacatgggcgattcaagagacaattgaac
gaacaggatgtagagataatctgccgagcccttctagcatattgccttgtccattacaga
ggagatgaaaaaataaaaagttttatatgggaccttattacaccaacagaggatgggcaa
actcgagagctacagaatcacttaggtttgtcagctcctgtacccaggggcagaaaagga
aaaaaagttaaaactcaggccagcacttttgatattcataaagcagaatggcttcgaaag
tataatccagagcatttgttgcaagatgatggatataaaaaacatataaaacaccactgc
aacaaggtcttacttcgagtaagaatgttgtattacttgaagcaagaagtcattggtaat
gagtgctcaaaagtttttgatggagttgaagccagtgaaattgacatttgggtccctgag
ccagatcattctgaagtgccagcggaatggtgggatacagaagcagataaatctctctta
ataggagtttttaagcatggttatgaaaagtataacacaattagagcagatgcagctctc
tgcttcttggaaagagtgggaaaacctgatgacaaggcagtcgctgcagaacagagagcc
aatgactatattgatggagatgtagaagacccagaatataaaccagccccagcaatgttt
aaagatgacatggaggatgatatatcatcaccgggggatcttataataacagatggagat
ggtcagatgattgaaggggacaagctttattggccaactcagtctgccttaactacacgc
ttgcgccgcctaataacagcataccagcgtactagtaagaacaggcaaacccaacagata
caacctgcatttccagtccaggcctgtgtgatgcagaatccatatgaagaagctgctcta
aatccaaaaatggctgccaaaattgaaagacaacaaagatggacaagaagagaagaagct
gatttctacagagtagtttcaacttttggtgtagtgtttgatcctgacagaggccaattt
gactggacgaagtttcgagccatggctagactacataagaaaacggatgaaagtttagaa
aaatacttgtatgcatttatggctatgtgcaggagagtctgtcgcctgccttcaaaagat
gaacttgtggatcccaatatttttatccagccaattacagaagagcgtgcctctcgaacc
ttgtatcgcattgaacttctcaggaaggtgcgagaacaagctgtccgtcatccacagata
tttgagcgattaaaactttgtcagcttaatccagatttgccagtttggtgggaatgtggg
actcatgactgggatttactgattggagctgcaaagcatggggttagccgaacagactac
cacatccttcgtgatcctgaactttcatttatgtcagcccagaggaactacagtcaaagt
aaagtagcacttccaataactcctacaccacttttgcatcagtatcagatggtggtgtct
gcatctcctcttgcacctcaggcaaggctgctagatatcaaagggaacacacttgaggat
acaaaagttaagaatgaaaaccataaagaagatccacattcttctggagaggagtccata
tatactgaggatatgcgaacaggagtaaagactgaacctttgagcccaaataatggcaca
ccatctcatgccacagaccagaaacctgttgtaaaggcagacagtgacaggcgtatggtt
gctgcaaggacagagcccctaactcctaacattgcttccaaaaaacagagacctaacaag
aggggatcagaatccagctccgattcagactctgattcagatagatcaacctgttcttcc
agatcatcttcatcttcatcctcctcttcatcctcttgctcacgttccagatcaggatcc
agttcctcatcttcttcatcttgttcttcagcgtcatcgtcatcttcatcatcctcttca
tcctcatcgtcatcctcatcctcttcgtcagaagaaagcgacagtgatgaagaagaatca
caaaagaggccagaaggaacgcctcttttgaaagcatatgatgaagagagtgtagcttcc
ctaagcactgtgcaggatgaaacccaggacagttttcaaatgaataatggaacaccaaat
tctaactgtatcttacaaggtggatatatgttggctgcttcctactggccaaaggatcgg
gttatgattaaccgtctggatagtatttgtcaaacaatattgaaaggtaaatggccttca
gcacggagaagttacgacagcaataccgtggcttcattttataccaccaagcttttagac
agcccgggtgccgctgcagagcccagtgagcccagtgtaccagcacctccaagtgcagat
gttaaagaagaaaatgatcagtcaccacagatgtcaaaggtgaagaagcatgtacgggaa
aaggagtttacagtgaaaatcaatgacgaaggaggtttgaaattaatttttcagaagcag
gggctttctcagaaaagaccatttgaaagtgaagatggtacattaggacagcagcaatac
cttgccaggctacaggaactccagaatgcttcagagaccagccttgccaatttcccaaag
tctttgccagagttgggaacttccagtcaatcaacagctactgcaaatggaataatagtt
gatgaccagcctgtaatgaaaaagaggagaggaaggaggaagaatgtggaaggagtagat
atcctgtttataaatagaaacaaagcacctaaccacgtttgccatagcattaatgtccct
caggttgctccaggaataaacccagcacttccatatgtaccatcccacggcgtgtgtgat
gcagaaagcccagttccagttattaacttgaaagatggaacaagacttgcgggtgatgat
gcccctaaaagaaaagatttggagaaatggtttaatgaacatcctggctatgttgaagat
ttaggagcttttattcctaaaatgcagcttcatgaaggaagacccaaacaaaaaaggcac
cgttgtcgcaatcctaataagctggatattaatagccttactggggaagaacgtgttcaa
ctaatcaatagaaggaatgctagaaaggtaggaggtgcttttgctccaccactgaaggac
ctgtgcagattcctgaaagagaattctgaatatggagtagctcctgaatgggcagatgtt
gtaaaacaatctggatttcttcctgaaagcatgtttgaccgtattctcacagggcctgtt
gtgcgagaggaagtaagcaggagagggagaagacctaaaagcgagattgctaaggcagct
gctgctgcagcaacagcaacagcaagcataccggtcaaccctttgttagccaatgggctg
ctgccaggggtggatctatctactctccatgccttacagcaaaatctgcaaaattttcag
tcactgcaagtgacagcaggcttaatgggaatgccaactagtttgaacactgctggggag
gcgaaaaacatggctgctgtgtttcctatgctgctttcaggaatggctggcttaccaaat
ttgctaggaatgggaggactcctcacaaaatctacagaatctgtttccgaggaaaaaaag
ggaaatgactcaagagagcccgacgggaaaaaagaaaggacagagagccaaaatgcacat
aatggtggagaaaactctgtgtcgggttctccttccacatcatctgctgctgctgcagcc
gccagcccccttgctcttaaccccttactgttgtccaatatactttatccagggatgctt
ctcactccaggccttaatctccatatcccagctttgtcccaatctaatatttttgatgta
cagaacaatgaaaacaatggcacaggcacagccaagcaaacagaagaaaaggaggaaaat
tctagggttaaagatcaagaggacaaaaggggagcagagcctagctctcgcaatgaaaac
agcacagatgagggttcagagaaagccgatgcttcctctgggtcagacagtacatcgtcc
tcgtctgaggattcagattctagtgatgaagactga
DBGET
integrated database retrieval system
