KEGG   Zootoca vivipara (common lizard): 118088013
Entry
118088013         CDS       T07275                                 
Symbol
COL9A2
Name
(RefSeq) collagen alpha-2(IX) chain
  KO
K08131  collagen type IX alpha
Organism
zvi  Zootoca vivipara (common lizard)
Pathway
zvi04510  Focal adhesion
zvi04512  ECM-receptor interaction
zvi04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:zvi00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    118088013 (COL9A2)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    118088013 (COL9A2)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    118088013 (COL9A2)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:zvi00535]
    118088013 (COL9A2)
Proteoglycans [BR:zvi00535]
 Extracellular matrix (ECM) proteoglycans
  Others
   118088013 (COL9A2)
SSDB
Motif
Pfam: Collagen
Other DBs
NCBI-GeneID: 118088013
NCBI-ProteinID: XP_034977079
LinkDB
Position
LG6:complement(37975431..38023796)
AA seq 690 aa
MASFLGSLKFCFLLQTISFSLAQLQGPPGEPGPRGPPGPPGVPGADGIDGDKGPPGAAGS
PGTKGEPGLPGPDGPPGKPGIDGLTGAKGEPGPFGRPGPKGQTGLPGPPGLPGPGLKGSP
GSPGQVGLPGEIGALGPKGVRGPEGPQGPPGPPGKPGPVGRIQGVEGSADYLCPTNCPAG
PKGPQGLQGLKGHKGRPGALGESGRQGRPGPKGDVGLSGEQGIPGPPGPQGLRGYPGMAG
PKGEIGPQGYKGMIGTIGAAGPPGEEGPRGPPGQAGEKGDLGARGFRGPQGGMGPKGGQG
LPGIDGKDGTPGIPGVKGSSGQPGLPGPPGHRGLAGLPGTPGTKGGPGQKGEPGGRGLAG
SSGAPGKLGEPGPQGEAGPQGIAGVKGDRGERGPVGPPGVQGKVGPKGEQGPPGIPGPQG
LPGVKGDKGFPGKIGPKGDIGDPGVEGLPGEKGEKGESGEPGPKGQQGVRGEPGFPGPTG
DAGAPGIRGFLGPPGPRGLAGERGVPGMPGTQGAPGRDTGDQHIVDVVLKMLQEQLAELA
VSAKRDAIGGAGVMGPPGPPGPPGSPGQQGPHGHPGPRGIPGILGAVGQIGNTGPKGKRG
EKGEQGEPGRGHQGMPGPPGIPGLPGHPGQATNGKEGERGTPGVPGEAGRPGLPGPPGSP
GLCEAAACLGASAYASARLTEPGAVKGPSY
NT seq 2073 nt   +upstreamnt  +downstreamnt
atggctagttttttgggtagcctcaaattctgctttctcctccaaaccatctctttctcc
ctggcacaattgcaaggtcctccaggagaacctggaccacgagggcccccgggtccgcca
ggagtgccaggcgctgatggcattgatggcgataaaggcccaccaggagcagcagggagc
cctgggaccaagggagaacccggccttccaggtccagatggccctccggggaaacctggg
attgatgggctaacgggagcaaaaggggaaccaggaccttttgggcgacctggccccaaa
ggccagactggacttccaggacctccagggcttccaggacctgggctgaaaggatctcct
ggctctccaggccaggttggactccctggagaaattggagctttgggacccaagggggta
cgtggaccagaagggccacaagggcctccagggcctcctgggaaacctggccccgttggg
cgcatccaaggagttgaaggcagtgcagattacttgtgtccaaccaactgcccagctgga
cccaaaggccctcagggattacagggcttgaagggacacaaaggccgtcctggagctctg
ggagagtctggcagacagggcagaccaggtccgaagggtgatgtgggcctctctggagaa
caaggcattcctggccctcccggcccacaaggtctcagaggatatcctggcatggcaggc
cccaaaggagagattggccctcaaggttataaaggcatgattggaaccattggagctgca
gggccaccgggtgaagaaggacccagggggccaccaggacaggctggcgagaagggagac
cttggtgctcgtggtttcaggggccctcaaggaggaatggggccaaaagggggacagggt
cttcctgggattgatggcaaagatggcaccccaggtattcctggagtgaagggaagttca
gggcaaccaggtcttccggggcctccaggccaccgaggcttagctggcttgccaggcaca
cctggaaccaaaggtggcccaggacagaagggtgaaccagggggtcgtggcctggcaggc
tcatcgggggcacctgggaaacttggtgagccaggacctcaaggagaagcagggccgcaa
gggatcgctggtgtgaaaggagatcggggtgagagaggcccagtgggtcctccaggagtg
caggggaaagtgggccccaaaggagagcagggacccccaggaattccaggcccacaaggt
ctcccaggagtgaaaggtgacaagggcttcccaggaaaaattggacccaaaggtgacatt
ggagatcctggtgttgaaggccttccaggggagaagggggagaagggtgaatcgggtgag
ccaggaccaaagggacagcaaggtgtccgcggggagcctggttttcctggacctactggg
gatgcaggcgcaccgggtatccgaggcttcctaggacctcccggcccccgagggctagct
ggggagcgcggtgtacctggaatgcctggcactcaaggtgctccgggcagggacacagga
gatcagcacattgttgatgtggtcttaaaaatgttacaagaacaactggctgagttagct
gtgagtgctaaaagagatgccataggaggggcaggtgtgatgggaccacctggacctcct
ggaccacctggatcacctggtcagcaagggccacatggacaccctggccctcgaggcatt
ccaggaatcctaggagctgtaggacaaattggcaacactggacctaaaggaaagaggggc
gagaaaggggagcagggagagcccggccgtggacatcaagggatgccagggccaccagga
ataccaggtcttccaggacaccctggccaagccacaaatggcaaagagggagagcgaggc
accccaggtgttccaggagaagctgggcggcctggtttacctggccctcctggttctcct
gggctctgtgaggcagccgcctgcctaggagcctctgcctatgcttcagcccgcctgact
gaaccaggtgctgtcaaaggaccttcgtactaa

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