Zootoca vivipara (common lizard): 118088013
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Entry
118088013 CDS
T07275
Symbol
COL9A2
Name
(RefSeq) collagen alpha-2(IX) chain
KO
K08131
collagen type IX alpha
Organism
zvi
Zootoca vivipara (common lizard)
Pathway
zvi04510
Focal adhesion
zvi04512
ECM-receptor interaction
zvi04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
zvi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
118088013 (COL9A2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
118088013 (COL9A2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
118088013 (COL9A2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
zvi00535
]
118088013 (COL9A2)
Proteoglycans [BR:
zvi00535
]
Extracellular matrix (ECM) proteoglycans
Others
118088013 (COL9A2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
118088013
NCBI-ProteinID:
XP_034977079
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Position
LG6:complement(37975431..38023796)
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AA seq
690 aa
AA seq
DB search
MASFLGSLKFCFLLQTISFSLAQLQGPPGEPGPRGPPGPPGVPGADGIDGDKGPPGAAGS
PGTKGEPGLPGPDGPPGKPGIDGLTGAKGEPGPFGRPGPKGQTGLPGPPGLPGPGLKGSP
GSPGQVGLPGEIGALGPKGVRGPEGPQGPPGPPGKPGPVGRIQGVEGSADYLCPTNCPAG
PKGPQGLQGLKGHKGRPGALGESGRQGRPGPKGDVGLSGEQGIPGPPGPQGLRGYPGMAG
PKGEIGPQGYKGMIGTIGAAGPPGEEGPRGPPGQAGEKGDLGARGFRGPQGGMGPKGGQG
LPGIDGKDGTPGIPGVKGSSGQPGLPGPPGHRGLAGLPGTPGTKGGPGQKGEPGGRGLAG
SSGAPGKLGEPGPQGEAGPQGIAGVKGDRGERGPVGPPGVQGKVGPKGEQGPPGIPGPQG
LPGVKGDKGFPGKIGPKGDIGDPGVEGLPGEKGEKGESGEPGPKGQQGVRGEPGFPGPTG
DAGAPGIRGFLGPPGPRGLAGERGVPGMPGTQGAPGRDTGDQHIVDVVLKMLQEQLAELA
VSAKRDAIGGAGVMGPPGPPGPPGSPGQQGPHGHPGPRGIPGILGAVGQIGNTGPKGKRG
EKGEQGEPGRGHQGMPGPPGIPGLPGHPGQATNGKEGERGTPGVPGEAGRPGLPGPPGSP
GLCEAAACLGASAYASARLTEPGAVKGPSY
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atggctagttttttgggtagcctcaaattctgctttctcctccaaaccatctctttctcc
ctggcacaattgcaaggtcctccaggagaacctggaccacgagggcccccgggtccgcca
ggagtgccaggcgctgatggcattgatggcgataaaggcccaccaggagcagcagggagc
cctgggaccaagggagaacccggccttccaggtccagatggccctccggggaaacctggg
attgatgggctaacgggagcaaaaggggaaccaggaccttttgggcgacctggccccaaa
ggccagactggacttccaggacctccagggcttccaggacctgggctgaaaggatctcct
ggctctccaggccaggttggactccctggagaaattggagctttgggacccaagggggta
cgtggaccagaagggccacaagggcctccagggcctcctgggaaacctggccccgttggg
cgcatccaaggagttgaaggcagtgcagattacttgtgtccaaccaactgcccagctgga
cccaaaggccctcagggattacagggcttgaagggacacaaaggccgtcctggagctctg
ggagagtctggcagacagggcagaccaggtccgaagggtgatgtgggcctctctggagaa
caaggcattcctggccctcccggcccacaaggtctcagaggatatcctggcatggcaggc
cccaaaggagagattggccctcaaggttataaaggcatgattggaaccattggagctgca
gggccaccgggtgaagaaggacccagggggccaccaggacaggctggcgagaagggagac
cttggtgctcgtggtttcaggggccctcaaggaggaatggggccaaaagggggacagggt
cttcctgggattgatggcaaagatggcaccccaggtattcctggagtgaagggaagttca
gggcaaccaggtcttccggggcctccaggccaccgaggcttagctggcttgccaggcaca
cctggaaccaaaggtggcccaggacagaagggtgaaccagggggtcgtggcctggcaggc
tcatcgggggcacctgggaaacttggtgagccaggacctcaaggagaagcagggccgcaa
gggatcgctggtgtgaaaggagatcggggtgagagaggcccagtgggtcctccaggagtg
caggggaaagtgggccccaaaggagagcagggacccccaggaattccaggcccacaaggt
ctcccaggagtgaaaggtgacaagggcttcccaggaaaaattggacccaaaggtgacatt
ggagatcctggtgttgaaggccttccaggggagaagggggagaagggtgaatcgggtgag
ccaggaccaaagggacagcaaggtgtccgcggggagcctggttttcctggacctactggg
gatgcaggcgcaccgggtatccgaggcttcctaggacctcccggcccccgagggctagct
ggggagcgcggtgtacctggaatgcctggcactcaaggtgctccgggcagggacacagga
gatcagcacattgttgatgtggtcttaaaaatgttacaagaacaactggctgagttagct
gtgagtgctaaaagagatgccataggaggggcaggtgtgatgggaccacctggacctcct
ggaccacctggatcacctggtcagcaagggccacatggacaccctggccctcgaggcatt
ccaggaatcctaggagctgtaggacaaattggcaacactggacctaaaggaaagaggggc
gagaaaggggagcagggagagcccggccgtggacatcaagggatgccagggccaccagga
ataccaggtcttccaggacaccctggccaagccacaaatggcaaagagggagagcgaggc
accccaggtgttccaggagaagctgggcggcctggtttacctggccctcctggttctcct
gggctctgtgaggcagccgcctgcctaggagcctctgcctatgcttcagcccgcctgact
gaaccaggtgctgtcaaaggaccttcgtactaa
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