Zootoca vivipara (common lizard): 118088125
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Entry
118088125 CDS
T07275
Symbol
COP1
Name
(RefSeq) E3 ubiquitin-protein ligase COP1 isoform X1
KO
K10143
E3 ubiquitin-protein ligase RFWD2 [EC:
2.3.2.27
]
Organism
zvi
Zootoca vivipara (common lizard)
Pathway
zvi04115
p53 signaling pathway
zvi04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
zvi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
118088125 (COP1)
09140 Cellular Processes
09143 Cell growth and death
04115 p53 signaling pathway
118088125 (COP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zvi04121
]
118088125 (COP1)
Enzymes [BR:
zvi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118088125 (COP1)
Ubiquitin system [BR:
zvi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
118088125 (COP1)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
118088125 (COP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
zf-C3HC4_2
Beta-prop_EIPR1
WDR55
Beta-prop_RIG_2nd
EIF3I
Beta-prop_WDR19_1st
Beta-prop_TEP1_C
zf-C3HC4
Beta-prop_CAF1B_HIR1
zf-RING_2
zf-RING_UBOX
Beta-prop_EML
zf-C3HC4_3
Beta-prop_DCAF4
zf-RING_5
Beta-prop_WDR90_POC16_2nd
zf-C3HC4_4
WD40_RFWD3
RING_XB3-XBAT31
Beta-prop_WDR35_TULP_N
Beta-prop_Vps41
WD40_like
Beta-prop_IFT140_1st
Beta-prop_DCAF12
Beta-prop_IFT122_1st
zf-rbx1
zf-RING_10
zf_C2H2_10
zf-RING_11
Sina_RING
Motif
Other DBs
NCBI-GeneID:
118088125
NCBI-ProteinID:
XP_034977220
LinkDB
All DBs
Position
LG7:complement(89896934..90005380)
Genome browser
AA seq
735 aa
AA seq
DB search
MSGSRQPPPPPPPPPQQQQHSTPAPGPGAAAAPPGPSSSSAASSVTTSASAASSPAPGSS
SPCAPAGLGAPGRPVLVAAVVSGSSGGGLSRLAGAARAGASGSGAAAAGGASGSRKRPLL
TPLCNGLLNSYEDKSNDFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYV
VDNIDHLYPNFLVNELILKQKQRFEEKRFKLDHSVSSTNGHRWQIFQDLLGTDQDNLDLA
NVNLMLELLVQKKKQLEAESHAAQLQILMEFLKVARRNKREQLEQIQKELSVLEEDIKRV
EEMSGLYSPVSEDSTVPQFEAPSPSHSSIIDSTEYSQPPGFSSTSQAKKQPWYNSTLASR
RKRLTAHFEDLEQCYFSTRMTRVSDDSRTSSQLDEFQECLSKFTRYNSVRPLATLSYASD
LYNGSSIVSSIEFDRDCDYFAIAGVTKKIKVYEYGTVIQDAVDIHYPENEMTCNSKISCI
SWSSYHKNLLASSDYEGTVILWDGFTGQRSKVYQEHEKRCWSVDFNLMDPKLLASGSDDA
KVKLWSTNLDNSVASIEAKANVCCVKFSPSSRYHLAFGCADHCVHYYDLRNTKQPIMVFK
GHRKAVSYAKFVSGEEIVSASTDSQLKLWNVGKPHCLRSFKGHINEKNFVGLASNGDYIA
CGSENNSLYLYYKGLSKTLLTFKFDTVKSVLDKDRKEDDTNEFVSAVCWRALPDGESNVL
IAANSQGTIKVLELV
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgtcagggagccggcagcctcctcctcctcctcctccgccgccccaacagcagcagcac
tcgactcccgcgccggggcctggcgccgcggcggcccccccgggaccttcctcttcctcc
gcagcctcctccgtcaccacctcggcctccgcggcctcctcgccggcgccgggctcctcc
tccccctgcgccccggcggggcttggggcccccgggcgacctgtgctggtggccgccgtg
gtctccggctcctccggcggggggctatcgcggctggccggggcggcccgggccggggcc
tctgggagcggcgcggcggcggcgggcggcgcgagtggcagcaggaagaggccgctgctc
accccgctctgcaacggcctcctgaactcctacgaggacaagagcaacgacttcgtatgc
cccatctgctttgatatgattgaagaagcttacatgacaaaatgtggacacagcttttgc
tataaatgtattcaccaaagcctggaagacaacaacagatgtcccaaatgtaattatgtt
gtagataacattgaccatctttaccccaactttttagtgaatgaacttatccttaaacaa
aagcaaagatttgaggaaaagagattcaaactggaccattcagtgagtagcaccaatggc
cacaggtggcagatatttcaagatttgctgggaacagatcaagataaccttgatttggcc
aatgttaatttaatgttggaactcctggtccagaagaaaaaacagctggaagcagaatcc
catgctgcccagctacagattttgatggaattcctgaaggttgccaggagaaataaaaga
gagcaactggagcagatccagaaggaactgagtgttctggaagaagatatcaaacgagtg
gaggaaatgagtggcttgtattcaccagtcagtgaggacagcactgtgcctcagtttgaa
gctccctcaccttcccacagtagcattattgattctacagaatacagccaacctcctgga
tttagcagtacttcccaggctaagaagcagccttggtataacagtacgctagcatcaagg
aggaagaggcttacagcccattttgaagatctggagcaatgctacttttccaccaggatg
actcgcgtatcagatgacagcagaacctcaagccagttggatgaatttcaggagtgtcta
tccaagttcactcgctacaattctgtccgacccctcgcaacactgtcgtatgctagtgac
ctctacaatggatccagcatagtatccagtattgagtttgatcgagactgtgactatttt
gctattgctggggtgacaaagaagattaaagtctatgaatatggcacagtcatccaggat
gcagttgatattcactatcctgagaatgaaatgacctgtaattccaaaatcagctgtatc
agctggagtagttaccacaaaaacctgttggccagcagtgactatgaaggtaccgtcatc
ttgtgggatgggttcacagggcaacgttcaaaagtctaccaggagcatgagaaaagatgc
tggagtgtggacttcaatttgatggatcctaaacttttggcttcaggctctgatgatgca
aaagtgaagctgtggtcaaccaacctggacaattcagtagctagtattgaggccaaggca
aatgtatgttgtgtgaaattcagcccatcatctaggtaccatctggcctttggttgtgca
gatcactgtgttcactactatgaccttcggaacactaagcaaccaatcatggtcttcaaa
gggcaccgcaaggctgtttcatatgcaaagttcgttagtggagaagaaatagtctctgcg
tcaacggacagtcagctaaagctgtggaatgtaggaaagccacactgtctgcgttccttt
aagggtcacatcaatgagaaaaattttgtgggtttggcatccaatggagactatattgcc
tgcggaagtgagaataattccctctacttgtactacaagggtctctcaaagacactgcta
accttcaaatttgacactgtcaaaagcgtcctggacaaagaccgtaaggaggatgataca
aatgaatttgtcagtgctgtgtgttggagggcactgccagacggggagtccaatgtgctg
attgctgctaacagtcagggtacaattaaggtactggagctagtatga
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