Zootoca vivipara (common lizard): 118088199
Help
Entry
118088199 CDS
T07275
Symbol
TRMT13
Name
(RefSeq) tRNA:m(4)X modification enzyme TRM13 homolog isoform X1
KO
K15446
tRNA:m4X modification enzyme [EC:
2.1.1.225
]
Organism
zvi
Zootoca vivipara (common lizard)
Brite
KEGG Orthology (KO) [BR:
zvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
zvi03016
]
118088199 (TRMT13)
Enzymes [BR:
zvi01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.225 tRNA:m4X modification enzyme
118088199 (TRMT13)
Transfer RNA biogenesis [BR:
zvi03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
118088199 (TRMT13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRM13
zf-TRM13_CCCH
zf-U11-48K
OrgC
NNH6
Methyltransf_32
Motif
Other DBs
NCBI-GeneID:
118088199
NCBI-ProteinID:
XP_034977399
LinkDB
All DBs
Position
LG7:74857402..74865798
Genome browser
AA seq
475 aa
AA seq
DB search
MAAEATAAAPVSPQPGRCAYFVARKRRFCKMVPARGKRFCGEHGGREEENGRKRIPCPLD
PKHTVYEDQLQKHLKKCNSREKPKPVYYAQDINAGLKDTTELPGEQQVPISALSKEELED
LIRKLRRASNCINYVLKDQILSHQALQEALNDPQNGDVAFKHLKQQASILGNMERLHLLE
PGNCFVEFGAGRGKLSHWVDIALQDSKDVHFLLVERATTRFKVDGKHRKNCFERLQVDIQ
HLCLNKVPVLVKEKLPVIGIGKHVCGAATDLALRCLVETYAKLCEGEKESPAPKRFKSNE
SNITSNNSGESQGKPIADSWSPVAGVVIALCCHHRCDWKHYVGQDFFTKVGLGAMEFNYF
KRMTSWATCGMRQTARKSYATHTKNEEQSNDAEEHDQDDRCVEYNLDSLQGLLTTEDRKQ
IGQLCKLLIDHGRIEYLQQRGYEAVLQHYTDLSVSLENVLLTAVPCQSSLTPSTA
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggaggctaccgctgccgcgccggtctcccctcagccgggccgctgcgcctat
ttcgtggcgcggaaaaggcgcttctgcaaaatggtgccggcccggggcaagcgcttctgc
ggcgagcacggcggccgtgaggaagaaaatggcaggaaaagaattccctgccctttggat
ccaaaacatactgtatatgaagatcagctacaaaaacacttgaaaaagtgtaattcaaga
gagaagccaaagcctgtctactatgctcaagatattaacgcaggactgaaagatacgaca
gagttgccaggagagcagcaggtaccgatttctgctctgtctaaagaagagttggaggac
ttaattagaaagctaagaagagcaagtaactgtataaattatgtacttaaggaccaaatc
ctctctcaccaagctttacaagaggccttgaatgacccccaaaatggagacgtggctttt
aagcatttgaaacagcaggcttctatattaggtaacatggaaagactacatttgcttgaa
cctggcaactgttttgttgaatttggagctggacgaggaaagctgtcccactgggtggat
atagccttacaagattctaaagatgtgcattttcttcttgttgaaagagcaactactagg
ttcaaggtagatggcaagcatagaaaaaattgctttgaaaggcttcaagtcgatatccag
catttgtgtttaaataaggttcctgttcttgtgaaagagaagctgcctgtgataggaatt
ggaaaacatgtttgtggtgcggcaacagatcttgctttgagatgcttagttgaaacatac
gcaaaactctgcgaaggcgaaaaggagagccctgcacctaaacgctttaagagcaatgaa
agcaacataacttctaataattctggtgaatcgcaaggcaagcctatagcagacagctgg
agccctgtggctggagttgttattgccctgtgttgccatcatagatgtgactggaagcat
tacgtaggccaagacttcttcacaaaagtaggacttggggcgatggaattcaattatttt
aaaaggatgacaagttgggccacttgtggcatgagacaaactgcaaggaaaagctatgca
actcatacaaagaatgaagaacaaagcaatgacgcagaagaacatgaccaagatgataga
tgtgttgaatacaatttggatagcctgcaagggctgttaaccactgaggaccgaaagcag
ataggtcagctttgcaaactgttgattgaccatggtcggatcgaatatttacagcaaaga
gggtatgaagctgtcttgcagcactatacagatctcagcgtttccttagaaaatgtactc
ttgacagctgtgccatgtcagtcttcattaaccccctcaactgcttaa
DBGET
integrated database retrieval system
