Zootoca vivipara (common lizard): 118088365
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Entry
118088365 CDS
T07275
Symbol
RBM39
Name
(RefSeq) RNA-binding protein 39 isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
zvi
Zootoca vivipara (common lizard)
Brite
KEGG Orthology (KO) [BR:
zvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
zvi03041
]
118088365 (RBM39)
Spliceosome [BR:
zvi03041
]
Common components
Common spliceosomal components
General mRNP proteins
118088365 (RBM39)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
PRP38_assoc
RBD_DEAH11
RRM_7
Motif
Other DBs
NCBI-GeneID:
118088365
NCBI-ProteinID:
XP_034977846
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All DBs
Position
LG7:29770761..29802753
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AA seq
522 aa
AA seq
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MADDIDIEAMLEAPYKKDENKLSSANGHEERSKKRKKSKSRSRSHDRKRSRSKERKRSRD
RERKKSKSRERKRSRSKERRRSRSRSRERRFRGRYRSPYSGPKFNSAIRGKIGLPHNIKI
SRRRSRSKSPFRKDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVR
DVRMISDRNSRRSKGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMAN
NLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSD
SECAKKALEQLNGFELAGRPMKVGHVTERTDASSASSFLDSDELERTGIDLGTTGRLQLM
ARLAEGTGLQIPPAAQQALQMSGSLAFSAVADLQTRLSQQSEVLAAAASVQPLATQCFQL
SNMFNPQTEEDAGWDTEIKDDVIEECNKHGGVAHIYVDKNSAQGNVYVKCPSIAAAIAAV
NALHGRWFAGKMITAAYVPLPTYHNLFPDSMNATQLLVPSRR
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgatattgatattgaagcaatgcttgaagctccttataagaaggatgagaac
aaattgagcagtgccaatggccatgaagaacgcagcaagaagagaaaaaagagcaagagc
agaagtcgtagccatgacaggaagaggagtagaagtaaggagcgcaaacgaagtcgtgat
cgtgagaggaagaagagcaaaagtcgggagaggaagcgcagtagaagtaaagaacggaga
cgcagccgttcaagaagtagagaacggcgattcagaggccgttacagaagcccctattct
ggtccaaaatttaacagtgccatcagaggaaagattggcttgcctcacaacattaaaata
agtagacgacgatctaggagcaaaagtccatttagaaaagacaagagtcctgtgagagaa
cctattgataatctaactccagaggagagagatgctcgaacagtattctgtatgcagctt
gctgcaagaattaggccaagagatttggaagagtttttctctactgtaggaaaggtccgt
gatgtacgcatgatttcagacagaaactccagacgttccaagggaattgcttatgtggaa
tttgttgatgttagttcagtacctttggcaattggattaacaggacaacgagttttgggg
gtaccaattattgtacaagcatctcaagcagagaaaaatcgagcggcagcaatggctaat
aacctacaaaaaggaagtgcaggccccatgagactgtatgtgggatcattacacttcaat
ataactgaagatatgcttcgtggaatctttgaaccttttgggcggattgaaagcattcag
ctgatgatggacagtgaaactggacgttccaaaggatatggatttattactttttcagat
tctgagtgtgctaaaaaggccttggaacaactaaatgggtttgaactagctggcaggcca
atgaaagtaggccatgtaactgaacgtacagatgcatccagtgctagctcatttttggac
agcgatgaactggaaaggactggaattgacttgggaacaactggccgtcttcagttaatg
gcaagactcgctgagggtactggcttgcaaattcctccagctgcacagcaagctcttcag
atgagtggatcattagcatttagcgctgtagcagatttacagacacgactttcacagcag
agtgaagtgttggcagcagctgcttctgtacaaccacttgcaacacagtgcttccagctc
tccaatatgtttaatcctcaaactgaagaagatgctggctgggatacagaaattaaggat
gatgtgattgaggagtgtaacaaacatggaggcgttgcccatatttatgtagacaaaaat
tcagctcagggtaatgtgtatgtcaaatgcccttcaatagctgcagcaattgcagctgtc
aatgcattacatggaaggtggtttgcaggtaaaatgatcacagcagcgtatgtaccactt
ccaacataccacaaccttttccctgattctatgaatgcaacccagctcttggttccttct
cggcgatga
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