Zootoca vivipara (common lizard): 118088423
Help
Entry
118088423 CDS
T07275
Symbol
COL20A1
Name
(RefSeq) collagen alpha-1(XX) chain
KO
K24357
collagen type XX alpha
Organism
zvi
Zootoca vivipara (common lizard)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
VWA
Collagen
Pur_ac_phosph_N
VWA_2
FN3_Tor_3rd
CBM_4_9
DUF4959
DUF4998
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
118088423
NCBI-ProteinID:
XP_034977966
LinkDB
All DBs
Position
LG7:complement(7175330..7292214)
Genome browser
AA seq
1419 aa
AA seq
DB search
MLVPDCFWISCIMLATHITLQACGQGSNRLKLTVLSEDRLQMKWKETEGNANGYKVRVKP
MAGDSEQEVMLKTKTAKATVGGLSPTKEYTLQIYILNGSHEALFVKRKFVIEELKNLSQA
RSNRKHPTSAPEKAEAPLETPAAEYTLETETTSPPARSETPTVLRREEPEKRRQKAISKG
VSEYLPNAEPTVMSAAPTTVKATLSSLVEFEMDYLAREKTPRESSRRALSQYSSDPRTEW
DLNTYSTRDEVLEALRSLQYKGGNTFTGLALTHVLEQNLKPEAGARPEAPKLIILLTDGK
SQDDASPSAQTLKDMGIEIFAVGVKNADEAELRHVASEPLELTVYNVLDFPLLSSLAGRL
TRVLCSRIKEMNKEENTGDDLLKAILVNTGAHLSPTNLAIKEVTSRSIRLIWNPPVIPPK
KYRVVYYPSRGGIPKEVVLDGAASAVQLLNLTSHTEYLVSVFPIYENAVGDGLRGITSTL
PLSAPGSLRVSEISHNSIRLSWEPADGAGQYLVLCSSAPNGAEDDTKEVKVEQPDVLLEG
LSPNTEYSLAVYAMYGEDASDPASVQETTLALSPPQFLHFSNISHASVRVNWEAPSHAVK
KHRVTYISSRGSNTGEVDVPGNASFAVLKPLSSLTQYFVSVISVYDEGDSFPVTANVTTL
KVPPPSHLKVTELSQGEVQLEWEASAASDVVVYQIKWNMIGEKRAQELSVAGNLASSILP
GLKKNTEYQISIWAYYRDGARSDTISVRHKITAKSPPSNLFVDSETPSSFQVHWDPPEGA
VQHYRLSYAPESGSKHQEMITVSGRSRSITLHSLLPNRLYMVTVSAVYLTGESDPVSTIG
QTASLLARLPTIRGSFPFKAEDCPVLDSMEGSLQGYDMMEVFGLMEKEYASIKGVAMEPY
IFLGIHTYTLFRDIQLTRKTSEVFPSGMPTEYTITFLLRLLPESPREAFAVWQITDEDFQ
PVLGIILDPNKKSLIYFHRDYEADVEEVTFDQQEVKKIFYGSFHKVHLSVSRSRVRLYID
CKKTAEKLLGTSESISTAGFVMIGKLTRTRGPRSGSAAFQLQSLRILCTSLWPEEDRCCD
VPAMRDEEVCPSFLPSCSCTSEIPGLPGPPGPPGSPGRRGPQGEQGEPGPKGEPGPPGQV
GPEGPGGHQGTPGTQGMTVQGPIGPPGIKGDKGDSGSPGMQGMMGPQGAPGKDGIQGSKG
VRGLEGTAGPPGPPGPRGFQGVAGTRGSSGEKGPPGEVGPTGLPGPKGERGEKVSLFGFY
FLWNPSLETLLFSHVLKFDSFIHEHSQKPVPIWEDKLKAGEPGPPGLPGPPGMKGERGEA
GMPGQPGRDGYPGERGASGLKGEKGSPGTNEEGSQGPRGRTGPAGEEMLGKQGSKGPPGS
TGPPGFPGARGQPGEPGHGGGCVLSGCYEESTIDAGLIP
NT seq
4260 nt
NT seq
+upstream
nt +downstream
nt
atgcttgttcctgactgtttctggatttcctgcataatgctggcaacgcacatcaccttg
caggcgtgtggtcaaggctcaaaccgcttgaaactgactgtcctctcagaagacaggttg
cagatgaaatggaaagaaacggaaggaaacgccaacggatacaaagtccgcgtgaagccc
atggcaggtgactctgagcaggaagtcatgctgaaaaccaagaccgccaaagcgacagtg
ggagggttgagtcccacgaaagagtatactttgcagatctacatcctcaatggttctcat
gaggccctctttgtcaagaggaaatttgtgattgaggagctgaagaacctctcccaagcc
agaagtaacaggaagcacccaacaagcgccccagaaaaggcagaggcgcctttagagacc
ccagcagctgaatacaccctggagactgaaaccacgtcaccacccgcccgcagtgagacg
ccaactgtgctaagaagggaagagccagagaagaggcggcaaaaagccatttccaaaggg
gtgagtgaatatttgccaaatgctgagccgactgtgatgtcagcggcaccaacaactgtg
aaggcgaccctttcaagcctagtggaatttgaaatggactatctggcccgagagaaaaca
cccagagaaagctcacggagagccttatcccagtacagcagtgacccacgtacagaatgg
gacctgaatacatactccacccgggatgaggtcttagaggccctgaggagcttgcaatat
aaaggaggcaacacattcacaggactggcgctgacgcatgtcctggaacagaacctgaag
cccgaagctggtgcgcggccagaagcccccaagctgatcattctcttgactgatggcaag
tctcaggatgatgccagtccgtctgctcagaccttgaaggatatgggaatagagatcttt
gctgttggagtgaaaaatgcagatgaggcagagttgcgccatgtggcctctgaacctttg
gaactgacagtgtacaatgtgctggatttccctctgcttagctctctggccggccggctc
acccgagtcttgtgttcccggatcaaggagatgaataaggaagagaacacaggtgatgac
cttctcaaagccattctggtgaatactggagcccacctgagcccaaccaatcttgctata
aaggaggtaacatccagaagtatacgcctcatctggaacccccctgtgataccacctaaa
aaatatagggtggtctattacccctctaggggtgggattcccaaagaggttgttttagat
ggggcagcctcggctgtgcagctcctcaacttgacatcccacacagaatatctggtttca
gtgtttcctatttatgagaatgcggttggagatggactcagaggcatcacctcaacgttg
cctctctctgcccctgggtctctcagagtttctgaaatcagccacaacagcatacggctg
agctgggagccagcagatggagctggccaatatctggttctttgctcctcagcacccaat
ggagcagaagatgataccaaagaggtgaaagtagaacagcctgatgttcttctcgagggc
ttgtcccccaacaccgaatactcgctggccgtttatgcaatgtacggagaagatgctagc
gatccggcgagtgtacaggaaaccactttggccctgagccctccacagttcttgcatttc
tccaacatcagccatgcctcggtcagggtcaactgggaagcgccttcgcatgccgtgaaa
aagcaccgcgtaacgtacatctccagcagggggagcaacactggagaggtggacgttcct
ggcaatgcatcctttgctgtgctgaagcctctctcatcgttgacgcagtattttgtcagc
gtgatttccgtttatgacgaaggcgactccttccctgtgacggccaacgtcaccacatta
aaggtgcccccaccaagccacctgaaggtcaccgagctctcgcaaggggaggtccagctc
gaatgggaagcatctgcagcgtccgatgtggttgtctaccagatcaaatggaacatgatt
ggggaaaagagggcgcaggagctgtctgttgctggaaatttggcgtcttctattcttccc
ggcctgaaaaagaacaccgagtaccagatctcaatatgggcttattacagagatggggct
cggagcgataccatctctgtccggcacaagatcactgccaagagtccacccagcaacctc
tttgtggactcagaaacacccagcagcttccaggtccactgggatcctcccgagggtgct
gtgcagcactacagactcagctatgctcctgagagtggtagcaagcaccaggaaatgata
actgtttctgggaggagcaggtcaatcactcttcactcgctgcttcctaatcgattgtac
atggtgacggtttctgcagtctatctcactggagaaagtgaccctgtatcgaccataggc
cagacagcttctcttttggccagactgcccacaataagaggatctttccctttcaaagct
gaggactgccctgtcctggactccatggaaggttctctgcaaggttatgatatgatggag
gtgtttggacttatggaaaaggagtatgcctccatcaaaggagttgctatggaaccctac
atcttcctaggaatccacacttacactcttttcagggatatccaactgacccggaagaca
agtgaagtgtttccttctgggatgccaactgaatacactatcactttcctccttcggctc
ctgccagagagcccccgggaagccttcgctgtgtggcagataacagatgaggacttccag
cctgtacttggcatcatacttgaccccaacaagaaatccttgatatatttccaccgtgac
tatgaagctgatgtcgaggaagtcacctttgaccagcaggaagtgaagaagatattctac
ggcagtttccacaaggtgcacctatccgtgagccgttccagggtcaggctctatatcgac
tgcaagaagacagcggagaaattgcttgggacttcggagagcatttcgacggctggcttt
gtcatgatcgggaagctgaccaggacgcgagggccacggagcgggtcagcagcgttccag
ctgcagtcactgcggattctgtgcaccagtttgtggcctgaagaggacagatgttgtgat
gttccagcaatgagagatgaagaggtatgccctagcttcctcccgtcctgcagctgcact
tctgagatcccgggcctcccagggcctccagggcctccgggtagtccgggaaggagagga
cctcagggggaacaaggcgagccaggccccaagggtgagccaggcccacctgggcaagtt
gggccagaaggtccaggaggacaccaggggacaccaggcacccaagggatgactgtgcag
ggtcccataggaccaccaggtattaaaggagacaaaggagacagtggcagtccagggatg
cagggtatgatgggtcctcaaggagctccagggaaggatgggattcaaggatcaaagggt
gttcgaggcctggaaggcacggctggacctcctggaccaccaggaccaaggggtttccaa
ggtgtagcaggcacccgaggcagcagtggggagaagggtcccccaggagaagttggccca
acggggctgcctggtccaaaaggagaaaggggagagaaggtgagtctctttggcttctat
tttctttggaacccctccttggaaacgctacttttttctcacgtgttgaagtttgactca
ttcatccatgaacattcacagaagccagttcccatttgggaggataagctgaaggctgga
gaacctggtccgcctggtcttcctgggcctcctggcatgaaaggagagagaggagaagct
gggatgcctggccagcccggcagagatggatacccaggagaaagaggtgcctctggactc
aaaggggagaaaggttctcctggaacaaacgaggaaggttctcaaggacctagaggtcga
acaggtccagcaggagaagagatgcttggcaagcaaggctcaaagggaccccctggcagc
actggtccccctgggtttcctggagcaagaggtcaaccaggagagcctggccatggaggc
ggttgtgtcctttcagggtgctatgaagagagtacaatagatgcagggttgatcccctaa
DBGET
integrated database retrieval system
