Zootoca vivipara (common lizard): 118088531
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Entry
118088531 CDS
T07275
Symbol
DDX20
Name
(RefSeq) probable ATP-dependent RNA helicase DDX20
KO
K13131
ATP-dependent RNA helicase DDX20 [EC:
5.6.2.7
]
Organism
zvi
Zootoca vivipara (common lizard)
Brite
KEGG Orthology (KO) [BR:
zvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
zvi03041
]
118088531 (DDX20)
Enzymes [BR:
zvi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
118088531 (DDX20)
Spliceosome [BR:
zvi03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
118088531 (DDX20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
SiaC
AAA_19
AAA_22
Motif
Other DBs
NCBI-GeneID:
118088531
NCBI-ProteinID:
XP_034978160
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Position
LG7:complement(35721878..35730300)
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AA seq
763 aa
AA seq
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MAAPEVAPAESWLRTRDVLLHEGPEDFGSLLLSAPVLEGLKAAGFLRPSPVQLKAIPLGR
CGLDLIVQAKSGTGKTCVFSTIALDSLILESPVTQILILAPTREIAVQIHAVITTIGIKM
EGLECHVFIGGTPLNQDKMRLKKCHIAVGSPGRIKQLIELNYLNTASIRLFILDEADKLL
EEGSFQDQVNWIYSSLPANKQMLAVSATYPESLANSLTRYMRDPTFVRLNPTDPSLIGLK
QYFKVVNSHPLPHKTFEEKAEHLQELFSKIPFNQALVFSNLHSRAQHLADLLTSKGFPAE
CISGSMNQNQRLDAMAKLKQFHCRVLISTDLTSRGIDAEKVNLVINLDVPLDWETYMHRI
GRAGRFGTLGLAVTYCCRGEEENMMMKIAQKCNLRLLPLPECIPPGLMEQFEGWDVEVTA
VPYPNASLNASLLPAKRPEGTMQHTTVSTSAPVVCENSVAAKPKQALKQKLKTRTEDTKP
KTTRKQQSSHSITQQKRQIEPCLQTAEKHNEEMDRETLKSMLPKIPCLSSFKNQQSTSTW
SMAEFIEDYEYFIKEGSEREVEIVRSYTGPGEQHQHPESDTNRICIETESSLHAAKARVL
TGDSDSDSSSCSSGSSTSSWEDQSYSKASSNTQQRDNGVLTSDQKCVSQFSGVPEPPQFQ
TSPQLQKIKEQNIKQSNQSRFRCTTKPSKNENVKSVSEVKPTPFPVCEDQSYEEYWRAYY
RAWRDHYAEASRSYYQMYQRPSNFLTAYHANAIYFEELLRGNR
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atggcggctcccgaggttgctccggctgagagctggctccgtacccgggatgtgcttctg
cacgaagggcccgaagacttcgggtcgctgctgctgtcggccccggtcctggagggtctg
aaagctgccgggtttctgaggccttccccggtgcagctcaaagccatcccgctgggacgc
tgcggcctagatctcattgtacaagcaaaatctggcactggtaaaacctgtgtcttctct
actattgcacttgattcccttatattagaaagccctgttacacagattttgatcttggcc
cctaccagagagattgctgttcagattcatgcagttattacaactattgggattaagatg
gaaggcttggaatgtcatgtcttcattggaggaacccctttaaaccaagataaaatgagg
ctgaaaaagtgtcacatagcagttggctctcctgggcgcataaagcaactcatagaactg
aactatctgaatacagccagcattcgtctcttcattcttgatgaggcagataagcttctg
gaagaaggtagtttccaggatcaagtcaattggatttattcttctctaccagccaataag
caaatgttggctgtgtcagccacctatcctgaatccttggctaattctttgactaggtac
atgagagaccccacctttgtgagattgaatcccactgacccaagtctcattgggttgaag
cagtacttcaaagttgtgaattctcacccgttacctcataagacttttgaggagaaggct
gaacatttacaggagctgttcagcaagattcctttcaaccaggccctggtcttctcgaat
ctacatagccgagctcaacacctagcagatttactgacttccaaaggttttcctgctgag
tgcatttcaggcagtatgaatcagaaccaacgacttgatgctatggctaaactcaagcag
tttcattgcagagtcttgatttcaactgatttgacttcccgtggaattgatgctgagaag
gtgaatctagttatcaacttggatgtgcctttggattgggaaacatacatgcatcggatt
ggcagagctgggcgctttggaactttagggctagcagtgacatattgctgccgtggggaa
gaagaaaacatgatgatgaaaattgcacagaaatgtaaccttcggttacttcctttacca
gaatgtatacctcctgggctcatggaacagtttgaaggctgggatgtcgaagtcactgct
gtcccatatcccaatgcttcactgaatgcatctctgttgccagctaagagaccagagggg
accatgcagcacacaacagtaagcaccagtgcccctgttgtttgtgaaaattctgttgca
gccaagccaaaacaagccctcaaacagaagcttaaaacgagaacagaggatacaaaacca
aaaacaaccaggaagcaacagtcttcccatagtatcactcagcagaagcgccaaatagag
ccttgtcttcagactgctgaaaagcataacgaggagatggacagggaaacattaaaaagc
atgcttcccaagatcccttgcttatcatcatttaagaaccagcagtccaccagcacatgg
agcatggcggagttcattgaggattatgaatacttcattaaagaaggctcagagagagaa
gtggaaatagtaagaagctatacaggcccaggagagcagcaccaacacccagaaagtgat
actaatagaatttgtattgaaacagaatccagcttgcatgctgcaaaagctcgtgtattg
acaggggactctgatagtgatagtagctcttgcagttctgggtcatccacctctagctgg
gaggaccagtcatatagtaaagcatcttcaaatacacaacaaagagacaatggtgtgctg
acatcggatcagaaatgtgtatcgcagttcagtggtgtccctgaaccaccacagttccaa
acgagtcctcagctccagaagataaaggaacagaatataaaacagagcaatcaaagccgc
ttccgttgtaccaccaagccctccaagaacgagaatgtaaaaagtgtatctgaagtcaaa
cctactcctttccctgtgtgtgaagatcagagttatgaggaatactggcgagcatattac
cgagcttggcgggaccattatgcagaagcttctcgttcatactaccaaatgtatcagcga
ccatcaaactttctaactgcttatcatgccaatgcaatctattttgaagagttgttgcgc
ggtaacagataa
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