Zootoca vivipara (common lizard): 118088687
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Entry
118088687 CDS
T07275
Symbol
RAD54L
Name
(RefSeq) DNA repair and recombination protein RAD54-like isoform X1
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
zvi
Zootoca vivipara (common lizard)
Pathway
zvi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
zvi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
118088687 (RAD54L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
zvi03400
]
118088687 (RAD54L)
DNA repair and recombination proteins [BR:
zvi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
118088687 (RAD54L)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
Rad54_N
SWI2_SNF2
Motif
Other DBs
NCBI-GeneID:
118088687
NCBI-ProteinID:
XP_034978512
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Position
LG7:51625805..51643953
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AA seq
744 aa
AA seq
DB search
MRRSLAPSQLVKRKPEGNGSDEDDTWHPETTRKRQKHGSKVDNRECYMSPFRKPLAQLTN
QPHCLDGSKHEAFIRSILSKPFKVPIPNYTGSPGFRALGIKRAGLRHALHDPFEEGALVL
YEPPPLTAHDQLKIDKDKVPVHVVVDPVLSHVLRPHQREGVKFLWECVTGRRIPGSHGCI
MADEMGLGKTLQCITLMWTLLRQSPDCKPEIDKAVVVSPSSLVKNWYNEVGKWLGGRIQP
LAIDGGSKEDIDRKLAGFMNQRGLRVPSPILIISYETFRLHAEVLQKGSVGLVICDEGHR
LKNSDNQTYQALNSLKTARRVLISGTPIQNDLLEYFSLVHFVNSGILGTAQEFKKHFEIP
ILKGRDADASEAGRHKGEERLKELISIVNRCLIRRTSDILSKYLPVKIEQVVCCRLTPLQ
ADLYKRFLKQAKPAEELKEGNMSVSSLSSITSLKKLCNHPALIYEKCVEEEEGFVGALQL
FPSGYSTKSLEPQLSGKMLVLDYILAVTRSTSNDKVVLVSNYTQTLDLFEKLCRARRYLY
VRLDGTMSIKKRAKIVERFNSISNPEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPAND
EQAMARVWRDGQKKTCYIYRLLSTGTIEEKIFQRQTHKKALSSCVVDEEQDVERHFSLGE
LKELFTLNETTASDTHDKIKCRRCVNGHQVRPPPEGSDCTSDLSQWNHCAEKRGLQDTVL
KAAWDAAVTFTFHHHSHEEQRGIP
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atgaggagaagcctggctcctagccagctggtaaagaggaagccagaagggaatggctct
gatgaagatgacacctggcatcctgaaactactcggaagagacagaaacatggcagcaaa
gtcgataacagggagtgttatatgtcacctttccggaagcccttggcacagttaaccaat
caacctcattgccttgatggcagtaagcatgaggcctttattcgcagcattttgtcaaaa
cctttcaaagttcctattccaaactacacaggttccccaggctttagagctctgggtatc
aagcgtgcaggactcaggcatgctctccacgacccttttgaagaaggagctctggtgctg
tacgaacctccacctctgactgctcatgaccagctgaaaatcgacaaggacaaagtgcct
gttcatgttgtggtggatcctgttctcagccacgtcttacggccccatcagagagagggg
gtgaagttcctgtgggagtgtgtgacaggccgccgcatccctggaagtcacggctgcatt
atggcagatgagatgggtctgggcaagactttgcagtgcatcactctgatgtggacgctt
ttgcgccaaagtccagattgcaagcctgaaatcgacaaggccgttgtggtctcgccgtcc
agcctggtgaagaactggtacaatgaagtggggaaatggcttggaggaaggattcagcca
ctggctatcgatggaggctccaaggaggatatagacaggaagctagctgggttcatgaac
cagcgaggcctaagagtcccatccccgatcctgataatttcctacgaaacattccgtctt
catgctgaagtcctccagaaagggagtgttgggttggtcatatgtgatgagggtcacagg
ctgaagaactcggataaccaaacgtaccaagctctgaacagcctgaaaactgcacggcga
gtgctcatctctggaacccccattcagaatgacctccttgaatacttcagtctagtacat
tttgtcaactcgggcatcctcgggacagctcaggagtttaaaaagcactttgaaattccc
atcctgaaaggcagggatgctgatgcaagtgaagcaggaagacacaagggagaggagagg
cttaaagagctgatcagcatcgtcaacaggtgtcttataaggaggacttcagatattctc
tccaaataccttccagtgaaaatagagcaggtggtgtgctgcaggctgactccccttcag
gcagacctgtacaaacgcttcctgaagcaagcaaagcccgctgaggaactgaaggaaggg
aacatgagtgtttcatccctttcctccatcacatcgctgaagaaactctgtaatcatcct
gccctgatctatgagaagtgtgtggaggaggaggaggggtttgtgggtgctctgcagtta
tttccttctggctatagcaccaagtccctagaacctcagctctcaggaaagatgctggtt
ttggactacattttggcagttacaaggagcaccagtaatgacaaagtagtcctagtttct
aattatactcagacactggatctctttgagaaactctgcagagctagaaggtacttgtat
gtccgactggatggcaccatgtccattaaaaagagagcaaagatagtggagcgtttcaac
agcatttctaaccctgaattcattttcatgctgagcagcaaagcaggtggctgtggctta
aatttgattggagccaacagacttgtgatgtttgacccagactggaacccagccaatgac
gaacaagccatggcccgtgtctggagagatggccagaagaagacttgctatatctatcga
ttgctttcgacagggacaattgaggaaaagatctttcagcggcagacccacaagaaggct
ctcagcagctgcgtcgtagatgaggagcaggatgtggaaagacacttctctcttggcgaa
ctgaaggagcttttcacgctcaacgagaccactgcaagtgatacccatgacaagatcaag
tgccgtcgctgtgtgaatggccatcaagtcaggccacctccagaggggtctgactgcact
tctgacttatcccagtggaaccactgtgctgaaaaacgtggacttcaggacacagtcctc
aaggctgcctgggatgctgctgtcacctttaccttccaccatcattcccatgaagaacaa
cgggggataccatga
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