Zootoca vivipara (common lizard): 118088710
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Entry
118088710 CDS
T07275
Symbol
MSH4
Name
(RefSeq) mutS protein homolog 4
KO
K08740
DNA mismatch repair protein MSH4
Organism
zvi
Zootoca vivipara (common lizard)
Brite
KEGG Orthology (KO) [BR:
zvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
zvi03036
]
118088710 (MSH4)
Chromosome and associated proteins [BR:
zvi03036
]
Eukaryotic type
Meiosis-specific proteins
Others
118088710 (MSH4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_IV
AAA_14
AAA_22
nSTAND3
ATPase_2
AAA_28
nSTAND_NTPase5
Myb_DNA-bind_3
AAA_30
Motif
Other DBs
NCBI-GeneID:
118088710
NCBI-ProteinID:
XP_034978571
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All DBs
Position
LG7:64133957..64163078
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AA seq
908 aa
AA seq
DB search
MEEVSAASISFSAPSSSSPCAERRPRGLLGLEQTPAGGGGDPPTSSDEQPLRPQRDRVSQ
SYFGDKSSYAENISTVNLTSSSSNRALHISRVRKTPLSTTRTGCRNGTPFMGYSVTSSSV
SAHNAASVIVAVIEGRGLARGEVGMASIDLKNPEVVVSQFADNTTYAKVITKLRILAPLE
IIMSNTACDTGNATKLFSLITENFKNVTFTTVQRKYFNEMKGLEYIEQLCTPEFSTVLME
VQSKYYCLAAVAAVLKYVEFIQNSVYAPKSLKISFHGSEQTAMIDSTSAINLELITNNRN
SRNGHTLFGVLNYTKTPGGSRRLRSNILEPLIDADTINTRLDSVQELLQEEELFLCLQSV
ISRFLDTDQLLSVLVQIPKQDTVNASESKITNLIYLKHTLELVEPLKDALKSYKTPLLKA
YYSSLEDNRFGVILEKIKTVINDDTRYTKGCLNMRTQKCYAVKPNINEFLDIARRTYTEI
VDDIAGMIAQLAEKYNLPLKTSFSSARGFFIQMSADCAAIHNGQLPSEFTKITKMKNVYS
FTSQDLMKMNERCQESLREIYHMTYLIVCKLLSEIYEHIHCLYKLSDAVSMLDMLQSFAH
ACTLSDYARPEFTDTLAIKEGWHPVLEKISLEKPVSNNTYITEGSNFIIITGPNMSGKST
YLKQIALSQIMAQIGSFVPAEYSSFRIAEQIFTRIGMDDDIETNSSTFMKEMKEIAYIIQ
NANDRSLIIIDELGRGTSAEEGIGICYAVCEYLLNLKAFTLFATHFLELCQIDALYPNVE
NNYFEVQHVRSSYGSREKIAYTYILSKGHTEEKNYGLKAAEVSSLPPSIIQDAKEIITLI
SRQMSKQQRSTPETLKKKAIYHLANRLVQTARNSRLDPDSLRIYLKGLKKKYETDCLASE
QVPTEDQQ
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggtttcggcagcctccatctccttctcggctccctcttcttcttcgccgtgc
gcggagcggcggccccgtggcctgctcgggttggagcagacgccggctggcggtggcggc
gaccctccgacttcctcggacgagcagccccttcgccctcagagagaccgagtctcccag
tcatactttggagacaagagttcctatgcagaaaacattagcacagtgaatttgacaagc
tcttcttcaaaccgagctctacatatttctcgagtacgaaaaacacctctctcaactact
aggacagggtgcagaaacgggactccttttatgggatattcagttacatcgtcttcagtc
tctgctcacaatgctgcatctgttattgtggctgtaatagaagggagaggtcttgccaga
ggtgaagtggggatggcaagtattgatttaaaaaatccagaagttgtggtatctcagttt
gcagacaatacaacatatgccaaggttatcactaaactcagaattttagcacccttggaa
atcattatgtcaaatactgcatgtgatacaggaaatgcaacaaaattgttcagcttgata
acagaaaatttcaagaatgtgacttttactacagtccaaagaaaatacttcaatgaaatg
aaaggcttggaatatattgagcaattatgtacacctgagttcagcactgttctgatggaa
gttcagtccaaatactactgtctggcagctgttgcagctgtgctgaagtatgttgagttc
atacaaaattcagtttatgcacctaaatcacttaagattagtttccatggaagtgagcaa
acagcaatgattgattcaacgtcagccataaaccttgaattaataactaacaataggaat
tctaggaatggacacactctttttggtgttctaaattatactaaaacaccagggggaagt
cggagacttcgatctaatattctagagcctttgattgatgctgataccattaatacaagg
ttggattctgttcaagagctacttcaggaagaggaactatttttgtgtcttcagtcagtt
atttcaagattcttggacactgatcaactactttcagttttagttcaaattccaaagcag
gatacggttaatgcatctgaatcaaagataacaaatttaatttatctgaagcacaccctg
gaacttgtagaacctttgaaggatgctttaaaaagctataaaacaccattgttaaaggct
tactatagttctttggaagacaacaggtttggagtcatacttgaaaagattaaaactgtc
attaatgatgatacaagatatacaaaaggatgcttgaatatgagaacacagaaatgctat
gcagtgaagcctaatataaatgaatttcttgatatagcacggagaacatacactgagatt
gtggatgatattgcaggaatgatagcacagcttgcagaaaaatacaaccttcctttgaaa
acaagcttcagttccgcacgaggattttttattcagatgagtgctgactgtgcagcaata
cacaatggtcaacttccttcagaatttaccaagattactaaaatgaaaaatgtgtatagc
tttacttcacaagacttaatgaaaatgaatgaaagatgccaagagtctttgagagaaatt
tatcacatgacatacttgatagtgtgtaaattactgagtgaaatttatgaacacattcat
tgcctgtacaaactctctgatgcagtgtctatgctagatatgttgcagtcatttgcccac
gcctgtacgctttctgactatgcacgtcctgagtttactgacacattagcaataaaggaa
ggatggcatcctgttcttgaaaaaatatctcttgagaaacctgtttccaacaatacttac
atcacagagggaagtaattttattataattacaggaccaaatatgagtggaaagtcaact
tacctaaaacagatagccctttctcagattatggcacaaattggatcttttgtcccagca
gaatattcttcatttaggattgctgagcaaatatttactagaataggtatggatgatgat
atagaaacaaattcatcaacattcatgaaggagatgaaagagatagcatatatcatacaa
aatgctaatgacagatcacttatcataattgatgagcttggcagaggtaccagtgctgaa
gaaggcatcggcatatgttacgcagtctgtgaatatcttcttaatttgaaggcatttaca
ctctttgccactcattttttggaattatgtcaaattgatgccctatatcccaatgtggaa
aacaattactttgaagtgcaacacgtgagaagtagttatggaagtagggagaaaattgct
tatacttatattctttctaaaggacacacggaggaaaaaaactatggacttaaagctgca
gaggtttcttctcttccaccatcaataatacaggatgccaaggagatcataactctgatt
tctagacaaatgtcgaagcaacaaagaagtactcctgagacattaaagaagaaggctata
tatcacttagcaaatagattagttcaaacagcccgcaactctcgattggatccagacagt
ttgcgaatatacctaaaaggtctgaagaaaaagtatgagactgattgccttgcttctgaa
caagtacctactgaagaccagcaataa
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