Zootoca vivipara (common lizard): 118088805
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Entry
118088805 CDS
T07275
Symbol
SAMHD1
Name
(RefSeq) deoxynucleoside triphosphate triphosphohydrolase SAMHD1
KO
K22544
deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
zvi
Zootoca vivipara (common lizard)
Pathway
zvi03250
Viral life cycle - HIV-1
zvi04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
zvi00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
118088805 (SAMHD1)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
118088805 (SAMHD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
zvi03400
]
118088805 (SAMHD1)
DNA repair and recombination proteins [BR:
zvi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
118088805 (SAMHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
SAM_2
HD_assoc_2
SAM_1
PDEase_I
Motif
Other DBs
NCBI-GeneID:
118088805
NCBI-ProteinID:
XP_034978779
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Position
LG7:complement(29285524..29316809)
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AA seq
624 aa
AA seq
DB search
MSSGNGEGSFKRPRSASPGDGFHTPEKRVSVCAASDPRGIHPRDWDIEQVCGFLRSEGFK
DPELLRCFREKNIAGSSFLYLTESELEEMRIRPGVRQNLLNCLSKLGQRHVDIMKVFNDP
IHGHIEMHPLLVRIIDTPQFQRLRYIKQLGGTYYVFPGASHNRFEHSLGVGYLAGRLIRA
LQKRQPELDINQRDILCVQIAGLCHDLGHGPFSHMYDARFIPRVCSGTSWKHEDASVKMF
EHLIASNDLNPVLEYYGLKLDEDIDFIKEQIAGPIKTESNSSSWPYRGRPEEKGFLYEIV
ANKTSGIDVDKWDYFARDCHHLGIQNNFDYVRFIKFARVCEFEKKKHICTRDKEVGNLYD
MFHTRNCLHRRAYQHKISNIIETMITDAFLKANPFIRIKGSGGKMYNIATAREDMEAYTK
LTDEIFLRILHSDEPELKEAREILCKIERRDLYKYLGQTQPPEGTEISKERCSKMAEEIA
KSKPITLHKKAGLKPEDFIVDVINMDYGMKKKNPVNNVPFYCKSDLNKAFRISKEQVSKL
LPEKFQEQQIRVYCKAAAEETISDARKYFVQWCIDNNFTKPQDGDIVAPELTPMKPDWNV
VKDDEKHDSMKNSSPKPRKSLFKD
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagcggtaacggggaaggaagtttcaagcggccccggtccgccagcccgggcgac
ggcttccacacgccggagaagcgcgtctccgtctgcgccgcctcggatccccgcgggatt
cacccgcgggactgggacatcgagcaggtgtgcggtttcctgcgaagcgagggcttcaaa
gacccggagctgctgcgctgcttccgagaaaaaaatattgctggttcatctttcctttac
ctcactgaatcagaacttgaagaaatgagaattaggcctggagtgagacagaaccttctg
aattgtctgagcaaactgggacaaagacatgttgacataatgaaggtatttaatgacccg
attcatggtcacattgaaatgcatcctcttcttgttcggatcattgacacacctcaattt
cagcgtctaagatacatcaaacaattgggtggcacttactatgttttcccaggagcatcg
cacaaccgttttgagcattcccttggggtcggctatctagcaggccgtttgatccgggca
ctgcagaagcgacaaccagagttggacatcaatcaaagggatattttgtgcgtccagatc
gctggtctttgtcatgatttgggtcatggaccattttcacacatgtatgatgcaagattc
atccctcgtgtttgttcaggaacttcatggaagcatgaagatgcttctgttaagatgttt
gaacatttgattgcttccaatgatctaaacccagtcctggagtattatggtctcaagctg
gatgaagatatagactttatcaaagagcagatagcaggacccattaagactgaaagtaac
agtagttcatggccttaccgtgggcgacctgaagaaaaaggctttctttatgagatagtg
gccaacaaaacaagtggcatcgatgttgataaatgggattattttgccagggattgtcac
catcttggaatccagaacaactttgattacgtacgcttcattaaatttgctcgtgtctgt
gaatttgagaaaaagaagcatatttgtacccgtgacaaggaggttggaaatttgtatgac
atgttccacacacggaattgtctgcaccgaagagcctaccaacataaaattagcaacatc
attgaaactatgattacagatgcctttttgaaagctaacccatttatccgcataaagggc
tctggagggaaaatgtacaatatcgctacagcacgagaagacatggaagcctacactaag
ctaacagatgagattttcttaaggattcttcattctgatgagccagagctgaaagaagca
cgggaaattttatgtaaaatagagcggcgtgacctgtataagtacctgggacagactcag
cccccagagggcacagaaatttcgaaggaacggtgtagtaagatggccgaagaaattgcc
aagtccaagcccattacattacataaaaaggctggattaaagcctgaagacttcattgtt
gatgttatcaacatggattatggaatgaaaaagaagaaccctgtcaataacgttcctttc
tattgcaagtctgacctcaataaggcgttcagaatttctaaagaacaagtttcaaagctt
ctaccggaaaaatttcaagagcagcaaatcagggtttattgtaaggcagcagctgaagaa
actatcagtgatgctagaaaatattttgttcagtggtgtatagacaacaatttcactaaa
ccacaggatggtgatattgttgcccctgaacttacaccaatgaaaccagactggaatgta
gtcaaagatgatgaaaagcatgattcaatgaaaaacagttctccaaagcccagaaagtca
ctttttaaagactag
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