Zootoca vivipara (common lizard): 118088866
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Entry
118088866 CDS
T07275
Symbol
PRPF38B
Name
(RefSeq) pre-mRNA-splicing factor 38B
KO
K12850
pre-mRNA-splicing factor 38B
Organism
zvi
Zootoca vivipara (common lizard)
Pathway
zvi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
zvi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118088866 (PRPF38B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
zvi03041
]
118088866 (PRPF38B)
Spliceosome [BR:
zvi03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
118088866 (PRPF38B)
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Paralog
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Motif
Pfam:
PRP38
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
118088866
NCBI-ProteinID:
XP_034978902
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All DBs
Position
LG7:78057446..78068685
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AA seq
569 aa
AA seq
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MANNCPVVGAGNCHQQQQQQQSPQQHQQPGGQQQQQQPLPLPQAGAVLSPPLPLQSAGPK
PAASGKQGNVLPLWGNEKTMNLNPMILTNILSSPYFKVQLYELKTYHEVVDEIFFKVTHV
EPWEKGSRKTAGQTGMCGGVRGVGTGGIVSTAFCLLYKLFTLKLTRKQVMGLITHIDSPF
IRALGFMYIRYTQPPTDLWDWFESFLDDEEDLDVKAGGGCVMTIGEMLRSFLTKLEWFST
LFPRIPVPVQKNIDQLIKARPRKIKKDGKEGVEEVDRHAERRRSRSPRRSLSPRRSPRRS
RSRSRHREGRGSSSFDRELERERERQRLEREAKERERRRSRSSDRALERRRSRSRERHRS
RSRDRKGDRRDREREREKENERSRRKERDYEKERGVERERERSRERDRSREKSKDRKSKS
EIDERRHKDEKDERKHRDDKRDSKKERKYSRSRSRDRKHRSRSVSRNAGKHSRSRSKEKS
SKHKSESKEKSNKRSRSGSRGRTDSAEKSRKRDLSPSKERSRKRSKSKERSHKHDHSDKD
HSDKHDHQRSQSTERENQEKQTKNKDETV
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atggccaacaactgccccgtcgtgggcgccgggaactgccatcaacagcagcagcagcag
caatcgcctcagcagcaccagcagccgggaggccaacagcagcagcagcagcctctcccg
ctcccgcaggccggcgccgttttgtcgccgccgctgccgctgcagagcgcggggcccaag
ccggcggcctcggggaagcagggcaacgtgctacccctgtgggggaacgagaagaccatg
aacctgaaccccatgatcctcaccaacatcctctcctcgccctacttcaaggtgcagctt
tacgagctcaagacctaccacgaggtggtcgacgaaattttcttcaaggttacacatgtt
gagccttgggagaaaggcagcagaaaaacagcaggccagacagggatgtgcggaggggtg
cgtggtgttggaactggaggtatagtgtctacagccttttgcctcctgtacaagctattt
accctgaagcttacccgtaagcaagtgatgggattgataactcatatagactcccccttt
attagggcccttggattcatgtatattaggtacacacagcctccaactgatttatgggac
tggtttgaatcctttcttgatgatgaggaggaccttgatgtgaaagcaggtggcggctgt
gtcatgaccattggagaaatgctgcgctcttttctaactaagctggaatggttttctacg
ttatttccaaggattcctgtaccagtacaaaagaacattgatcaactaataaaagccagg
cctagaaaaatcaagaaggatggcaaggagggagtagaagaagtagacaggcatgcggaa
cgtagacgttcaaggtctccaagaaggtccttgagccccaggaggtcacctagaagatca
agaagcagaagtcgtcatcgtgaaggccgtggttcatccagttttgatagagaattggaa
cgggagagggagagacaaagactagagcgagaagctaaagagagggagaggcgaagatct
cgaagttctgatcgggcattggagcgaagacgaagtagaagccgagagaggcacagaagt
cgaagtcgtgatcgaaaaggagacagaagagacagggagagggagagggagaaagaaaac
gaacgtagtagaaggaaggagcgtgactatgagaaagagagaggtgttgaaagggaaaga
gagcgctctagggagagagatcgttctagagaaaaatcaaaagacagaaaaagcaagagt
gaaatcgatgagaggagacacaaagatgaaaaagatgaaaggaaacatagggatgataaa
agagattccaaaaaagaaaggaagtatagcaggagccgaagtagggaccggaagcatagg
agcagaagtgtgagtaggaatgctggcaagcacagtagaagcaggagtaaagagaagtca
agtaaacacaaaagtgaaagcaaagagaaatcaaataagcgaagcagaagtggaagcaga
ggaagaactgatagtgctgaaaagtcccgaaaacgagaccttagtcccagtaaagagaga
tcacgaaaacgtagcaaaagcaaagaacgttcccataaacacgatcacagtgataaggac
cactcagacaaacatgatcatcagaggagccaaagtacagaacgagagaatcaagaaaaa
caaactaaaaacaaagatgagactgtatga
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