Zootoca vivipara (common lizard): 118089060
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Entry
118089060 CDS
T07275
Name
(RefSeq) LOW QUALITY PROTEIN: U4/U6 small nuclear ribonucleoprotein Prp4-like
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
zvi
Zootoca vivipara (common lizard)
Pathway
zvi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
zvi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118089060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
zvi03041
]
118089060
Spliceosome [BR:
zvi03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
118089060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_Prp19
WD40
Beta-prop_THOC3
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
WD40_Gbeta
WD40_WDHD1_1st
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_2nd
WDR55
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
PRP4
Beta-prop_EML
WD40_MABP1-WDR62_1st
Beta-prop_WDR36-Utp21_1st
Beta-prop_SCAP
NBCH_WD40
Beta-prop_Aladin
WDR90_beta-prop_4th
Beta-prop_TEP1_C
Beta-prop_DCAF4
Beta-prop_EIPR1
Beta-prop_WDR41
Beta-prop_Vps41
Beta-prop_RIG_2nd
WD_LRWD1
Beta-prop_IFT122_1st
WD40_like
Beta-prop_IFT140_1st
Beta-prop_WDR11_1st
Motif
Other DBs
NCBI-GeneID:
118089060
NCBI-ProteinID:
XP_034979331
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Position
LG7:complement(70669743..70671333)
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AA seq
523 aa
AA seq
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MAASRIAPVNKGSKTKAPDERDAPPAKKAPIFYGSLEEKERERLLKGESGMMGKDAVKAA
IEAGNINITSGEVFDLEEHISESQAEVLAECDRRKRARQINVSTDDSEVKACLRALREPI
TLFGEGPAERRKRLRNILSVVGTDALKKTKXDDEKSKKSKEEYQQTWYHEGPNALKTARL
WIANYSLPRAMKRLKEAWLLNEVPEATRTSQKQELHKSLRSLNNFCSQIGGDRPISYCSF
SPNSKLPATACWSGLCKMWSVPDCNLIHTLRGHNTNVGAIVFHPKATISLDKKDINLASC
AADGSVKLWSLETSEPVADIEGHTVRVARVVWHPSGRFLGTTCYDHFWRLWDLEAQEEIL
HQEGHSKGVYDIAFHVDGSLSATGGLDAFGRVWDLRTGHCIMFLEGHLKEIYGINFSPNG
YHIATGSGDNTCKVWDLRQRKCIYTIPAHQNLVTGVKFEPNHGNFLLTGAYDHTAKVWTH
PGSSPLKTLAGHEGKVMGLDISLDGQLIATCSYDRTFKLWVAE
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgtcgcggatcgccccggtgaataagggttcaaaaacaaaggccccagatgaa
agggatgctcctcctgccaagaaggccccaattttctatgggagcttggaggagaaagag
cgagagcgtctcctcaaaggggagtctgggatgatgggcaaggatgcggtcaaagcagct
attgaggctggcaacatcaatatcaccagtggtgaagtttttgacttggaagagcacatc
agtgagagccaggcagaggtcctggcagagtgtgaccgccggaagcgtgccaggcaaatc
aatgtttccacagatgactctgaggtcaaggcctgcttacgagccctcagggagcccatc
acactttttggagagggccctgcagaaaggaggaagaggctacgtaatattctgtctgtg
gttggcacagacgcattgaagaagaccaaatgagatgatgagaagtccaagaaatcaaaa
gaggagtatcagcaaacctggtaccatgaaggaccaaatgccttgaagacggccagactg
tggatcgccaactactccctccctcgggcaatgaagcgattgaaggaagcctggctgctc
aatgaggtccctgaggccacacggacatcccagaaacaggagctgcacaaatctctaagg
tctttgaataatttctgcagccaaattgggggcgaccgccctatctcctattgcagcttc
agccccaactccaagctcccggctacagcttgctggagtggtctctgtaagatgtggtca
gtgccggattgtaatctcatccacactttgcgagggcacaacaccaacgttggagccatt
gtctttcaccccaaggcaaccatctccctggacaagaaggacatcaacctggcttcatgt
gcagcggatggctctgtcaaactctggagtcttgaaaccagtgaaccagtggctgacatt
gagggacacacagtgagagtagcccgggtggtatggcatccctctggcaggtttctgggc
accacctgctatgaccacttttggcgcctgtgggacctggaggctcaggaggagatcttg
caccaggaggggcacagcaaaggagtctacgacatcgccttccatgttgacggctccctt
tctgccactggtggccttgatgcatttggccgcgtgtgggatctgcgcacggggcattgt
atcatgtttttggagggtcatctcaaggagatctatggaatcaacttttcccctaacggg
taccacattgccacaggcagcggcgacaacacctgtaaagtgtgggatctccgccagaga
aagtgcatctacaccatccctgcccatcagaacctggtgacaggagtgaagtttgaacca
aatcatggcaacttcttgcttaccggagcttacgaccacacagccaaggtctggacgcac
ccaggctcatccccgctgaaaaccttggcaggacacgagggcaaagtcatgggcttggac
atctccctggacgggcagctgatcgccacatgctcttatgacaggactttcaagctttgg
gtggcagagtag
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