Zootoca vivipara (common lizard): 118089086
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Entry
118089086 CDS
T07275
Symbol
SOX12
Name
(RefSeq) transcription factor SOX-12
KO
K09268
transcription factor SOX11/12 (SOX group C)
Organism
zvi
Zootoca vivipara (common lizard)
Brite
KEGG Orthology (KO) [BR:
zvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zvi03000
]
118089086 (SOX12)
Transcription factors [BR:
zvi03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
118089086 (SOX12)
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GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
118089086
NCBI-ProteinID:
XP_034979381
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Position
LG7:3299121..3300098
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AA seq
325 aa
AA seq
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MVQQRSVRSRGSEGKREVCPKDALLLKDAKGEPGWCKTPSGHIKRPMNAFMVWSQNERRK
IMDQWPDMHNAEISKRLGRRWQLLQDSEKIPFVREAERLRLKHMADYPDYKYRPRKKGKV
GTAKSRPRVPVKIKPSVLGRVASSRRQPPKQGGSGSQEGRSTPELDDDPLEARLMEAPFD
DGPKTPSKEFWHVLPASGEKGAWVGSSGDPKDHEVAAAAAATKPFLDEARSSEIPSPAST
RSPPSSFASSDEEFEEELLSFLPARAQPNTPCGTPDWSAFDKDLDLFPLGATSHFEFPDY
CTPEVTEMIAGDWLMSSISDLVFTY
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atggtccagcagaggagcgtgcggagccgggggtcggagggcaagcgggaggtgtgcccc
aaggatgccctgcttctgaaggatgccaaaggggagccgggctggtgcaagactcccagc
gggcacatcaaacgccccatgaacgccttcatggtgtggtcccagaacgagcggcggaaa
atcatggaccagtggccggacatgcacaatgccgagatctccaagcgcctcggccggcgc
tggcagctcctgcaggactctgagaagatcccctttgtcagggaggcagagcggctacga
ctgaagcacatggctgactacccagactacaagtaccggcccaggaagaagggcaaggtg
ggcaccgctaagtcccgccccagggtcccggtcaagatcaagccctccgtcctcgggagg
gtggcgtccagcagaaggcagcccccaaagcagggtggcagcggcagccaggagggacgc
tcgacgcccgagctggacgacgacccgctggaagcgcggctgatggaggcgccttttgac
gacggccccaaaactcccagcaaagagttctggcacgtgctgccggcgagcggcgagaaa
ggagcgtgggtgggcagttctggcgacccaaaggaccacgaggttgctgctgccgctgct
gccaccaagccctttttggacgaggccaggtcctcggagatcccttccccagcctccacc
cggtctccaccgtcttccttcgcctcgtcggacgaagagtttgaagaagagctcttgagc
ttcctgcccgcccgagcccagccgaacacgccctgcgggacgccggactggtccgccttc
gacaaagacctggacctcttccccctgggtgccacgtctcactttgagttcccggattat
tgcaccccggaggtgactgagatgatagctggggactggctgatgtccagcatctcagac
ttggtcttcacgtactga
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