KEGG   Zootoca vivipara (common lizard): 118089772
Entry
118089772         CDS       T07275                                 
Symbol
EXOSC4
Name
(RefSeq) exosome complex component RRP41
  KO
K11600  exosome complex component RRP41
Organism
zvi  Zootoca vivipara (common lizard)
Pathway
zvi03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:zvi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    118089772 (EXOSC4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:zvi03019]
    118089772 (EXOSC4)
Messenger RNA biogenesis [BR:zvi03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     118089772 (EXOSC4)
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Cofactors
     118089772 (EXOSC4)
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 118089772
NCBI-ProteinID: XP_034980545
LinkDB
Position
LG8:complement(79228298..79232568)
AA seq 245 aa
MAGLELLSEQGYRVDGRRAGELRQIRARLGVFAQADGSAYLEQGNTKALAVVYGPHEMRG
SRSKALPDQALLNCQFSLATFSTGERKRRPHGDRQAGEMSLQLKQTFDAAILTQLYPRSQ
IDIYVQILQADGGNYCASVNAATLAVIDAGIPMRDYVCAISAGFLEDTPLADLNYVEEAA
GGPQMALALLPKSEQIALLEMNARLHEDHLERIMEAASKACKDVYAVLDQVVREHLREVT
ALLGK
NT seq 738 nt   +upstreamnt  +downstreamnt
atggccgggctggagctgctgtcggagcagggctaccgcgtggacgggcggcgcgccggg
gagctgcgccagatccgcgcccgcctgggcgtcttcgcgcaggccgatggctccgcctac
ctggagcagggcaacaccaaggcgctggccgtcgtctacgggccccacgagatgcgcggc
tcccgcagcaaagcgctgcccgaccaggcgctgctcaactgccagttcagcctggccacc
ttcagcaccggcgagcgcaagcggcggccccacggcgaccggcaggcgggcgagatgagc
ctgcagctcaagcagacctttgacgccgccatcctcacgcagctctacccgcgctcgcag
atcgacatctatgtgcagatcctgcaggcggacggcgggaactactgtgcctcggtgaac
gctgctactctggcggtcattgacgccggcatccccatgcgggactacgtctgcgccatc
tcggccggcttcctggaggacacgcccctggccgacctgaactacgtggaggaggcggcc
ggtggcccccagatggccctggcgctgctgcccaagtcggagcagattgcgctgctggag
atgaacgcccggctgcacgaggaccacctggagcgcatcatggaagccgccagcaaggcc
tgcaaggatgtctatgccgtgctggaccaggtggtgagggagcatctgcgtgaggtcact
gctctgctgggcaagtga

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