Zootoca vivipara (common lizard): 118089774
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Entry
118089774 CDS
T07275
Symbol
CLP1
Name
(RefSeq) polyribonucleotide 5'-hydroxyl-kinase Clp1 isoform X1
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
zvi
Zootoca vivipara (common lizard)
Pathway
zvi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
zvi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
118089774 (CLP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zvi03019
]
118089774 (CLP1)
Enzymes [BR:
zvi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
118089774 (CLP1)
Messenger RNA biogenesis [BR:
zvi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
118089774 (CLP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLP1_P
Clp1
CLP1_N
MMR_HSR1
AAA_18
ATP_bind_1
TniB
AAA_22
AAA_16
CbiA
Motif
Other DBs
NCBI-GeneID:
118089774
NCBI-ProteinID:
XP_034980549
LinkDB
All DBs
Position
LG1:complement(79002612..79012811)
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AA seq
438 aa
AA seq
DB search
MGDFDLSSCKGNKMAEEAGDEKKLVAKFELERETELRFEVEASQMVQLELLTGMAEVFGT
ELTRNKKFTFDAGAKVAVFTWHGCSVQLTGRTEVAYVSKDTPMLLYLNTHTALEQMRWQA
EREDERGPRVMVVGPTDVGKSTVCRLLLNYAVRLGRRPTFVELDVGQGSISIPGTMGALY
IERPADVEEGFSVQAPLVYHFGSTTPGTNIKLYNKITSRLADVFNQRCEVNRRASVSGCV
INTCGWVKGSGYQALVHAASAFEVDVVVVLDQERLYNELKRDLPHFVRTVLLPKSGGVVE
RSKDFRREFRDDRIREYFYGFRGSFYPHAFDVKFSDVKIYKVGAPTIPDSCLPLGMSQED
NQLKLVPVTPGRDMVHHLLSVSTADGTDENISEASVAGFIVVTGVDLERQVFTVLSPAPR
PLPKNFLLIMDIRFMDLK
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgggtgattttgatctaagcagttgcaaaggaaacaagatggcagaagaagctggagat
gaaaagaaactggtggccaagtttgagttggagagggagactgagctccgctttgaggtt
gaagcttcacaaatggtccagctggagcttctgacaggcatggctgaggtttttggaaca
gaactgacgcgcaacaagaaattcacctttgatgctggtgccaaagtggctgtcttcact
tggcatggctgttcagtacagctaaccggtcggactgaagtagcctacgtctccaaggac
actcccatgctgctgtacctcaacacccatacagccctggaacagatgcggtggcaggct
gagcgcgaggatgaacggggacctcgtgtcatggtggtgggccccacagatgtaggaaag
tcaacagtctgccgcctgctgctgaattatgctgtgcggctagggcgccgtcccactttt
gtggagctggatgtagggcagggctcaatctctatcccaggcaccatgggggcactctat
attgagcgacctgcagatgttgaagaaggattctcagttcaggcccctctggtctatcac
tttggttccaccacacctggcactaacatcaaactttataacaagatcacatcccgcttg
gctgatgtatttaaccagcgctgtgaggtgaaccgccgggcttcggtcagtggctgtgtc
atcaatacctgtggctgggtgaagggatctgggtaccaggcacttgtacatgctgcctct
gcctttgaagttgatgttgtggtagttctggaccaggagcgcctctacaatgaactgaag
cgggacttgcctcactttgttcggacagtgctgctccctaagtcaggtggagtggtcgag
cgctccaaggacttccggcgggagtttcgtgatgaccgcattcgcgaatatttctatggt
ttccgaggaagcttctacccacatgcctttgatgtgaagttctctgatgtcaagatatac
aaagtgggcgctcccactatccctgattcctgcctgcctctgggcatgtcgcaggaagac
aaccaactcaagctggtaccagttacacctgggcgtgacatggtacaccatctgttaagt
gttagtactgctgatggcactgatgagaacatctctgaagcaagtgtggctggtttcatt
gtagtcactggagtcgatcttgaacgccaggtcttcaccgttctttcaccagcacctcgc
ccgttgcccaagaactttctgctcatcatggacattcgtttcatggatcttaagtag
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