Zootoca vivipara (common lizard): 118089908
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Entry
118089908 CDS
T07275
Symbol
KDM1B
Name
(RefSeq) lysine-specific histone demethylase 1B
KO
K19413
lysine-specific histone demethylase 1B [EC:1.-.-.-]
Organism
zvi
Zootoca vivipara (common lizard)
Brite
KEGG Orthology (KO) [BR:
zvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
zvi03036
]
118089908 (KDM1B)
Chromosome and associated proteins [BR:
zvi03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
118089908 (KDM1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Amino_oxidase
NAD_binding_8
zf-CW
Pyr_redox_2
Thi4
SWIRM
HI0933_like
Pyr_redox_3
DAO
FAD_binding_3
FAD_oxidored
Pyr_redox
Lycopene_cycl
FAD_binding_2
GIDA
NAD_binding_9
2-Hacid_dh_C
AlaDh_PNT_C
KARI_N
NAD_binding_7
VMAP-M5
Motif
Other DBs
NCBI-GeneID:
118089908
NCBI-ProteinID:
XP_034980930
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Position
LG8:18955380..18980742
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AA seq
818 aa
AA seq
DB search
MSTGRFRTKKKTPPVDHSHDNLPLRSSGRQVRRKAAEAAEDDEDASEKKYRKCEKAGCTA
TCPVCFASAAERCAKNGYTSRWYHLSCGEHFCNECFDHYYRSHKDGYEKYTAWKRIWTSN
GKSEPSPKAFMADQQLPYWVQCTKPECGKWRQLTKEIQLTSQIAKTYRCGMKLNNSTKVE
GPDQCSMPEDLRVAEVSDHWWYSMLILPPLLKDSVAAPLLSAYYPDCVGMSPSCTSTHRL
VGESNAIKMEHLKTPPTIAGMNKYFQPFYQPNECGKALCVRPDVMELDELYEFPEYSRDP
TMYLALRNLILALWYTNCKEALTPQKCTHHIIVRGLVRIRCVRETERILHFMTRKGLINT
GVLSVNPDQPLLPKDYHNKSVIVVGAGPAGLAAARQLKNFGIKVLVLEAKDRIGGRVWDD
KTFKGITVGKGPQIVNGCVNNPVALMCEQLGIKMHKIGEKCDLIQEGGRITDPTIDKRMD
FHFNSILDVVADWRKDKNQHQDIPLGDKIQEIYKVFIQESGIQFSDLEEKVLQFHVSNLE
YACGSNLHEVSARSWDHNEFFAQFAGDHTLLNSGYSTIIEKMAEGLDIRLRVPVRSIDHT
GEEVQVTATDGTLWKAQKVLVAVPLTILQKGAIQFNPALSERKMKAINSLGAGVIEKIAL
QFPYRFWDSKIQGADYFGHVPPSSSKRGLFSVFYDMDPQRKCSVLMSVVTGDAVATMKNL
DDKQVLQQCMIVLRELFKEQEVPDPVKYFVTRWNKDPWIQMAYSFVKTGGSGEAYDILAE
DIQGKIFFAGEATNRHFPQTVTGAYLSGVREASKIAAS
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atgtcaactgggaggttccgaacaaagaaaaaaacacctcctgttgaccattctcacgat
aatcttcctctgagaagttcagggagacaggtgaggaggaaagctgcagaggcagccgag
gatgatgaagatgcctcagagaagaagtaccggaaatgtgaaaaggcaggatgtacagca
acatgccctgtttgctttgccagtgctgctgaaaggtgtgctaaaaatggctacacatca
agatggtatcacctctcctgtggggaacatttctgtaatgaatgttttgatcattactac
cgaagtcataaagatggctatgaaaaatacactgcctggaaaaggatttggaccagtaat
ggaaaaagtgaacccagccctaaagcttttatggctgatcaacagctcccttactgggtc
cagtgtacaaagccagagtgtgggaaatggcggcagctgacaaaggaaatccagcttacc
tcgcaaatagccaaaacataccgctgtggcatgaaactgaacaattccaccaaggtggaa
ggcccagaccagtgctccatgcctgaggatctgagagttgctgaagtttcagatcactgg
tggtattccatgctcatccttccgcctttgctgaaggacagtgtggctgctcctttgctg
tctgcatactacccagactgtgtgggcatgagtccctcttgtaccagtactcaccggttg
gttggtgaatccaatgcaataaaaatggagcacttaaagactccacctactatagctggg
atgaacaagtacttccagcctttctaccagcccaacgaatgtggtaaagcactgtgtgtg
agaccagatgtaatggaactagatgaactctatgagtttccagaatattcacgagacccc
accatgtacctagctctgagaaacctcattttggctctgtggtacacaaactgcaaagaa
gccctaacccctcagaaatgtacgcatcacatcattgttcgaggccttgtacgcattcgc
tgtgtgcgggagacagagcgaatacttcattttatgaccaggaaaggtctgattaacaca
ggggtcttgtcagttaatcctgaccaacctcttctgcccaaagactaccataataaatct
gtcattgtggttggggctggtcctgctggattagcagctgcaagacaacttaagaacttt
ggaattaaggttcttgtgttagaagcgaaggacagaattgggggccgcgtgtgggacgat
aagactttcaaagggattactgtgggaaaagggccacagatagtgaacggctgtgtcaac
aatccagtagcactaatgtgtgagcaactgggcattaaaatgcataaaattggagagaag
tgtgatctaattcaggaaggtggaaggataactgaccccactatagacaagcgcatggac
ttccatttcaattctatccttgatgttgtagcagactggagaaaagacaaaaatcagcat
caggatattcctcttggagataaaatccaggagatctataaagtttttattcaggaatct
ggtattcagttcagtgatctcgaggaaaaagtccttcagttccatgtcagtaaccttgaa
tacgcctgtggcagcaacctccatgaggtttctgcacgctcctgggatcacaatgaattt
tttgctcagtttgctggagatcacacgctcttaaactcgggatactcaacaataattgaa
aaaatggctgaaggcctggacattcggttaagggttccagttcgcagtatagaccataca
ggggaagaagtccaagtgactgcaaccgatggaactctctggaaagcacaaaaggtttta
gttgctgtacctctgactattcttcaaaaaggtgccattcagtttaacccagccttgtca
gagagaaaaatgaaagctatcaatagtttgggagctggagtcattgagaagattgcgcta
cagtttccatacagattttgggacagcaagattcaaggagctgattactttggccacgtt
ccacctagttccagcaaacgtggactcttcagtgttttctatgacatggatccacagcgt
aaatgcagtgttctaatgtctgttgttacgggtgatgctgtggcaactatgaagaactta
gatgacaagcaagtgctgcaacaatgcatgattgtgctccgcgagctttttaaggaacag
gaagtgccagacccagtcaagtactttgttacacgatggaacaaagatccttggatccaa
atggcatatagttttgtgaagacagggggcagcggtgaagcttatgacatcctagcggaa
gacatacaaggaaaaatattttttgctggagaggccacaaacagacatttcccgcagaca
gttactggagcttacttgagtggtgttcgagaagcaagcaaaatagcagcatcttga
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