Zootoca vivipara (common lizard): 118089954
Help
Entry
118089954 CDS
T07275
Symbol
RNF125
Name
(RefSeq) E3 ubiquitin-protein ligase RNF125 isoform X1
KO
K12170
E3 ubiquitin-protein ligase RNF125 [EC:
2.3.2.27
]
Organism
zvi
Zootoca vivipara (common lizard)
Pathway
zvi04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
zvi00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
118089954 (RNF125)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zvi04121
]
118089954 (RNF125)
Enzymes [BR:
zvi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118089954 (RNF125)
Ubiquitin system [BR:
zvi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
118089954 (RNF125)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf_C2HC_14
zf-Di19
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-C3HC4_4
zf-C3HC4_3
zf-RING_5
TRAF3_RING
zf-Nse
U-box
Prok-RING_4
RING_XB3-XBAT31
CODH_A_N
zf-RING_6
zf-RING_10
zf-MIZ
TRAFD1-XIAF1_ZnF
zf_UBZ
DZR
Motif
Other DBs
NCBI-GeneID:
118089954
NCBI-ProteinID:
XP_034981046
LinkDB
All DBs
Position
LG8:complement(34484203..34509082)
Genome browser
AA seq
229 aa
AA seq
DB search
MGSALSSDSREVANPLQIAEEEKQPQVPSFDCSICLEVLHQPVRTQCGHVFCHSCIAASI
RNNTWTCPYCRAFLPSEGIPATDITKMMKNRHQNCTECGTQVLLSEMRAHLRTCDQYIEK
YGPLQEVAYPDTRYPCPFCQYSLDEEDFLDHFLTFHRSDRRAVYCPICRLSPGGGSSYCS
RNFLRHLQLRHTFYYEDYIDISIVEEALVERVLDRSLIEYMHVPNPNTA
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atgggatccgcgttaagcagcgacagtcgggaggtggcgaaccctctccagatagcagaa
gaggagaagcagccgcaagtcccatcttttgactgctccatctgtttggaggtgctccac
cagcctgtaaggacacagtgcggccacgtattttgccactcctgtattgcagcaagtata
aggaataacacatggacatgtccctactgccgggcgtttcttccttctgaagggattcca
gcaactgatattactaagatgatgaaaaatagacaccaaaattgtacagaatgtggaaca
caggtactcctcagtgaaatgcgagctcatctgagaacttgtgaccaatatatagagaaa
tatgggcccctacaggaagttgcatacccagacacaagatatccatgccctttctgccag
tattcattggatgaagaagattttctggaccattttctcactttccacagatctgacagg
agagcagtgtactgtccaatttgtcgcttatcacctggtggtggttcaagttattgcagc
aggaatttcttaaggcaccttcagctcagacatacgttctattatgaagactatatagat
ataagtatagtggaagaagctctcgttgaaagagttctagatcggtcgttaatagagtat
atgcatgtgcctaatccaaatacggcgtaa
DBGET
integrated database retrieval system
