Zootoca vivipara (common lizard): 118090379
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Entry
118090379 CDS
T07275
Symbol
RAD54B
Name
(RefSeq) DNA repair and recombination protein RAD54B
KO
K10877
DNA repair and recombination protein RAD54B [EC:5.6.2.-]
Organism
zvi
Zootoca vivipara (common lizard)
Pathway
zvi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
zvi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
118090379 (RAD54B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
zvi03400
]
118090379 (RAD54B)
DNA repair and recombination proteins [BR:
zvi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
118090379 (RAD54B)
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
AAA_22
TusA
Motif
Other DBs
NCBI-GeneID:
118090379
NCBI-ProteinID:
XP_034981936
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Position
LG8:complement(55516981..55555489)
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AA seq
900 aa
AA seq
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MRRSAAPSQLMGNSVKKPRFMPPGKTHMLSLKKESEHSGFEVDEGQLNGSTSGNICSTTC
DLSSTLAVKSDQGEFCSKNNNNDCHFETRVKSPYRTKIGPACPVTTATARHQEEPGCLTK
YFSVVWCKASKKKHKKWEGDAILIVKGKSVTLKDTEGRDIGRGAGYKTKDLENFDQGQTL
MVGGKEIEVMGIIAEEDFKSGKCFQSGVKTAEEIWNVSQAAAKPFCNPFKNVSKSNTKGN
SPQGSQNYNPRHDPCGPNCLVMLRPSPNHQRLFNKSGLPVVDVVVDPHIVNHLRPHQREG
ITFLYECMMGMRVSCRFGAILADEMGLGKTLQCISVLWTLLRQGPYGCKPVIKQALIVTP
GSLVKNWGKEFQKWLGSERIKVFLVDQDHKVEEFINSPLYSVLIISYEMFLRSLDQLQKV
QFGLVICDEGHRLKNAAIKTTTALASLSCERRIILTGTPVQNDLQEFYALIEYVNPGILG
PLSAYKKVYEEPILRSREPSATKEEIELGERRAAELTRLTGLFILRRTQDVINKFLPPKL
ESILFCRPTALQLDLYRCLLSSPFVRSCLQGSLENSSHLICIGALKKLCNHPCLLFKTIK
DKECNPNCDVQEKQNLSEALLDIVSQEHTPASFSETDSGKLKVLTQLLAAIQELSPAERV
VVVSNYTQTLNILQEVCKRHGYSYARLDGNTPVSQRQQIVDGFNSKFCPSFIFLLSSKAG
GVGLNLVGASHLILYDIDWNPATDIQAMARVWRDGQRHTVHIYRLLTTGTIEEKIYQRQI
SKQGLSGAVVDFSKGSEHIRFSVEELRNLFTLHEESSCLTHDLLECKCTEKEGDLGPSEN
LSLQDCQLGQGNVKPDSKKPLSMSQLMQWKHYSGNHENLPDPFLRRIKENITFIFQNMTN
NT seq
2703 nt
NT seq
+upstream
nt +downstream
nt
atgagacgatcagcagctcctagtcaactgatgggaaattcagtcaaaaagccgaggttt
atgcctccaggaaaaacccatatgttgtctctgaaaaaagaatctgaacactcaggcttt
gaggtggatgagggacaattgaatggctcaacctctggaaacatctgttctacaacttgt
gacttaagttctacgctggctgtgaaatctgatcaaggagaattttgctctaaaaataat
aataatgactgccattttgaaaccagagtgaaatcaccatatagaactaaaataggtcca
gcgtgcccagtgacaacagcaacagccaggcaccaggaggagcctggctgcctcacaaaa
tacttcagtgtagtgtggtgcaaggcctccaagaaaaaacacaagaagtgggaaggtgat
gccattcttattgtgaaagggaagtcggtgaccctgaaagatacagaaggcagagacatt
ggaagaggtgctggatacaaaaccaaagacctggagaattttgaccaaggccaaactctg
atggttggaggcaaagaaattgaagtgatgggcataattgcagaagaggacttcaaaagc
ggcaagtgttttcagtctggtgtgaagactgctgaggagatttggaacgtctcgcaagct
gctgcgaaaccattctgcaaccctttcaaaaatgtatccaaatctaacactaaaggaaat
tctccccaaggctcccagaactataacccacgtcatgatccatgcggaccaaattgctta
gttatgctgcgcccatccccaaatcaccagcggttgttcaacaagtcgggcttgcctgtg
gtggatgttgttgtggacccccacattgtaaaccatcttcgaccgcaccaacgggaaggg
ataacatttctttatgaatgtatgatgggaatgagagtaagctgtagatttggagccatt
cttgcagatgaaatgggtttaggaaaaactctgcagtgcatttcagtcctctggactctc
ctgcgtcaagggccatatggatgcaagcctgtaataaaacaggcactgatagtcactcct
ggcagtctcgtgaagaattgggggaaagaatttcaaaaatggctgggaagtgagagaatc
aaggtgttcttagtggatcaggatcacaaagtagaagagttcatcaattccccgctttat
tcagtcctgatcattagttatgagatgtttctacgctccttggaccaattacagaaggtg
cagtttggccttgtcatttgtgatgagggacatcgcttgaaaaatgctgctattaagacg
acgactgcacttgccagtctgtcttgtgagaggagaattattctgaccggtactccagta
caaaatgatctgcaagaattttatgcattaatagagtatgtaaatcctggaatacttggc
cctttgtcggcatacaaaaaagtatatgaggaacctattctcagatcccgagagccttca
gctacaaaggaagaaattgaactgggagagagaagagcagcagaactgactcgcctcact
ggactcttcattctgagaagaacccaagatgtcataaacaaattcctccctcctaaattg
gagagcatacttttctgccgcccaacagcactgcagctggatctctatcgatgtctgctg
agctctccgtttgttagatcttgtcttcaaggtagtctggaaaacagctcccatttaata
tgcattggagctctgaaaaaactttgcaaccacccctgccttctcttcaaaacaataaag
gacaaagaatgcaatcccaattgtgatgtacaagagaaacagaacctctctgaggctctg
cttgatattgtttctcaagagcataccccagcctctttctctgagactgactcggggaag
ttgaaggtgctgacgcagttgctggcagcaattcaggaactgagtcctgcagaaagagtt
gtcgtggtatccaattacacacagaccctgaacatattgcaagaggtgtgcaaacgccat
ggatattcctatgcaaggcttgatggcaacactcccgtctcccagagacagcagattgtt
gatggttttaatagtaaattctgcccatcttttatcttcctgctgagttcaaaggctggt
ggcgtgggtctgaaccttgttggggcgtcccatttaatcttatacgatatcgattggaat
ccagccacggatattcaggcaatggccagagtttggagagatgggcagagacatacagtg
catatttacagactgcttactacaggcacaatagaagagaaaatctatcagagacagatc
agtaagcaagggctctctggggcagttgtcgacttttccaagggatccgaacacatccgt
ttttctgttgaagaacttagaaatctgttcaccctgcatgaagagtctagttgccttacc
catgatttgctggagtgtaaatgtacggaaaaggaaggtgacctaggtccctcagaaaac
ctttctctacaagattgccagcttggccaaggcaacgtgaaacctgactcaaaaaagcct
ctctctatgtcacagttgatgcaatggaaacactattctgggaatcatgaaaatcttccc
gatccctttcttagaagaataaaagaaaacattacattcattttccaaaatatgaccaac
taa
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