Zootoca vivipara (common lizard): 118090506
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Entry
118090506 CDS
T07275
Symbol
CDKAL1
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase isoform X1
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase [EC:
2.8.4.5
]
Organism
zvi
Zootoca vivipara (common lizard)
Brite
KEGG Orthology (KO) [BR:
zvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
zvi03016
]
118090506 (CDKAL1)
Enzymes [BR:
zvi01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
118090506 (CDKAL1)
Transfer RNA biogenesis [BR:
zvi03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
118090506 (CDKAL1)
Prokaryotic type
Methylthiotransferases
118090506 (CDKAL1)
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Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
Motif
Other DBs
NCBI-GeneID:
118090506
NCBI-ProteinID:
XP_034982205
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Position
LG8:19660081..19895479
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AA seq
578 aa
AA seq
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MPAVCDSLLGDIEDIISEQDPKPQDLQFRRKNVIPKVRKRHSQKNVEADYDDPPSDSVIP
GVQKIWIRTWGCSHNSSDGEYMAGQLAAYGYRITDNAAEADLWLLNSCTVKSPAEDHFRN
SIKKAQEEKKKVVLAGCVPQAQPRQDYLQGLSIIGVQQIDRVVEVVEETIKGHSVRLLGQ
KKDNGKRLGGARLDLPKIRKNPLIEIISINTGCLNACTYCKTKHARGDLASYPIEELVNR
AKQSFQEGVCEIWLTSEDTGAYGRDIGTDLPTLLWKLVEVIPEGAMLRLGMTNPPYILEH
LEEMAKILNHPRVYAFLHVPVQSASDSVLMDMKREYCLADFKRVVDFLKEKVPGITIATD
IICGFPGETDEDFQETMKLVEEYKFPSLFINQFYPRPGTPAAKMHQVPAQVKKQRTKELS
RLFHSYNPYDHKIGEKQNVLVTEESFDSKFYVAHNRFYEQVLVPKNPEFMGKMVEVNIFE
AGKHFMRGSPLSDARVFTPSITRPLAKGEVSGLTEEFRHALENSSESKACPSAERHKGPL
SYRMAMQLPWQQGGGVLKALSLSVTLLAVLIAFYYRGV
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgcctgctgtctgtgattcccttcttggagacattgaagatatcatctcagagcaagac
ccaaagccgcaagacctgcagttcaggagaaaaaatgttattcctaaagtgcggaaacgc
cattcacaaaaaaatgtagaggcagattatgatgatcccccaagtgacagtgtcattcct
ggtgtacagaaaatttggatacgcacatggggatgttctcataatagttcagatggagaa
tacatggctggacaactggctgcatatggatacagaattacagacaatgctgcagaagct
gatctgtggcttctgaacagctgtactgtaaaaagccctgctgaagaccactttagaaac
tcaattaagaaagcacaagaagaaaaaaagaaagttgttctagctggatgtgttccacaa
gcccagcctcgacaagactacctacaaggcctgagtatcattggggttcagcagatagat
cgtgtcgtggaagttgttgaggagactatcaaaggtcactctgtgagattgctgggtcag
aaaaaggataatggaaaacggttggggggagcgcgattggatttgccaaagattagaaag
aacccactgatagaaataatttccatcaatacagggtgtttgaatgcatgtacctactgt
aaaactaagcatgccagaggagatctagcaagttatcctattgaagaactggtaaacaga
gccaaacaatcctttcaagaaggggtatgtgagatatggctgaccagtgaagacacaggg
gcttatggaagagacattggcacagacctccctactctcctatggaagctggttgaagtg
atccctgagggagcaatgctgagacttggcatgacgaaccctccctatattttagagcat
ctggaggaaatggcaaaaattctcaaccatccaagagtctatgcatttcttcatgtacca
gttcaaagtgcctctgatagcgtactcatggacatgaagagggaatactgtctggcggac
ttcaaaagggtagtggatttccttaaagaaaaagtgcctggaataacaattgccacagac
atcatttgtgggtttccaggggaaacagatgaagattttcaagaaaccatgaagcttgta
gaagagtacaagtttccaagtctctttattaaccagttttaccccaggcctgggactcct
gctgcaaaaatgcatcaagttccagcccaagtaaaaaaacagagaacgaaagaactgtca
agattgtttcactcgtacaacccatatgatcacaagattggggagaaacaaaatgttctt
gtgacagaagaatcatttgattccaagttttatgttgctcataatcgattctacgagcag
gtacttgtgccaaagaaccctgaattcatgggtaaaatggtagaagtgaacatttttgaa
gcagggaagcactttatgagggggagcccactgtcggatgccagagtgttcaccccgtct
atcactaggccattagccaaaggagaggtgtctggtttaacagaggagttcagacatgca
ctggagaacagctcagaatcaaaagcctgtccatctgctgagaggcataaaggaccattg
agctacaggatggcaatgcagttgccttggcaacaagggggaggtgtactgaaggcgctg
tcactaagtgtgactcttctggcagtccttattgccttttactatcgaggtgtttaa
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