Zootoca vivipara (common lizard): 118090865
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Entry
118090865 CDS
T07275
Name
(RefSeq) lys-63-specific deubiquitinase BRCC36-like
KO
K11864
BRCA1/BRCA2-containing complex subunit 3 [EC:3.4.19.-]
Organism
zvi
Zootoca vivipara (common lizard)
Pathway
zvi03440
Homologous recombination
zvi04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
zvi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
118090865
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
118090865
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
zvi01002
]
118090865
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zvi04121
]
118090865
03036 Chromosome and associated proteins [BR:
zvi03036
]
118090865
03400 DNA repair and recombination proteins [BR:
zvi03400
]
118090865
Peptidases and inhibitors [BR:
zvi01002
]
Metallo peptidases
Family M67
118090865
Ubiquitin system [BR:
zvi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
118090865
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
118090865
BRISC complex
118090865
Chromosome and associated proteins [BR:
zvi03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
BRISC complex
118090865
DNA repair and recombination proteins [BR:
zvi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
118090865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCC36_C
JAB
Prok-JAB
WWC1
APG6_N
DUF1670
UPF0172
TEDC1
Motif
Other DBs
NCBI-GeneID:
118090865
NCBI-ProteinID:
XP_034983068
LinkDB
All DBs
Position
LG9:68990788..68991808
Genome browser
AA seq
279 aa
AA seq
DB search
MALQAVHLEADAFLVCMVHALSSEQEEVMGLCLGEVGASRIAHIRSVIILLRSDKRKDRV
EISPEQLSAASMEAERLAKVTGEPTRVVGWYLTHPHITVWPSHIDLCTQAMYQMLDRDFV
GLIFSCFSDDKSTKTGQVVFTCFQSLQAPESSCESERVEIPVHLIPRSTVGKACLESMME
FPRILRQEEQDAFKKIHSLSHLDPIAKIHNGSVFTKKLCSQMLLIGGPLMQWLEGRLKRN
QDRLQELQQEKEKLLEELAALEREEQSHGLRNEATAPGL
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atggcgttgcaagcagtgcacttggaggcggacgccttcctggtctgcatggtccacgct
ctgagctctgagcaagaagaggtcatgggcctctgcctcggtgaggtcggggccagccga
attgctcacattcgctcggtgatcattctgctccgctcagataagaggaaagatcgtgtg
gagatttctccggagcagctctcggctgcttcgatggaagcggagaggttggctaaggtc
acgggagagcccacgagggttgtgggctggtatctcacccatccccacataaccgtttgg
ccatcgcacatcgatctctgcacgcaagccatgtatcagatgttggacagagattttgtg
gggctgatcttctcctgtttcagcgacgacaagagcacaaagacgggccaggttgtcttc
acctgcttccagtcccttcaagccccagagagctcctgcgaatctgaaagggttgaaatt
cctgttcacctgattcctcgcagcaccgtggggaaagcgtgtcttgagtccatgatggag
ttccccaggatcttgcgtcaagaggagcaagatgccttcaaaaaaatccatagcctttct
catctggatcctatcgccaagatccacaacggatcggtgttcactaagaagctgtgcagc
cagatgttgctcatcggtggtcctctgatgcagtggctggagggtcgcttgaagagaaac
caagacaggctgcaggaactgcaacaggagaaagagaaacttctggaggaactcgctgcc
ctggagagagaagaacaatctcatggcctgagaaatgaagcaacagccccaggattgtaa
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