Zootoca vivipara (common lizard): 118091059
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Entry
118091059 CDS
T07275
Symbol
OPTN
Name
(RefSeq) optineurin
KO
K19946
optineurin
Organism
zvi
Zootoca vivipara (common lizard)
Pathway
zvi04137
Mitophagy - animal
zvi04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
zvi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
118091059 (OPTN)
04137 Mitophagy - animal
118091059 (OPTN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zvi04131
]
118091059 (OPTN)
Membrane trafficking [BR:
zvi04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
118091059 (OPTN)
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
118091059 (OPTN)
Autophagy
Mitophagy
PINK1-Parkin associated proteins
118091059 (OPTN)
Xenophagy
Cargo receptors
118091059 (OPTN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NEMO
CC2-LZ
zf_C2H2_10
CMD
Prok_Ub
Motif
Other DBs
NCBI-GeneID:
118091059
NCBI-ProteinID:
XP_034983549
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Position
LG9:complement(10001085..10016955)
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AA seq
552 aa
AA seq
DB search
MSKKPLNGQCSKTEVENGHPSVSPPPLGTSTVEEMVQQMKELITENNELKEAMRQRNQAM
KDRFEELSTWREKLKEEREFYETKFKEARQCLATKCVENEALKKQLQTLEEREEGSTKGC
TVSKKEMAQELEQLRTQVVKLQAEKADLVAIISELQLKLNIGTEDSFVEIRMHEGELNGG
VKEIQDLHGKTMRDAAPSVSLDEAKKKLETEALTVSQLLHSLRSEIQKREGLEKELQEQK
ERLLLENKTAEKGTQTEQEEEEGKERAESVGDEIETLNLQVSALFKELQETHAKLKDAEI
IQKKLQEKCQALERQQHGGSAGDLDEKQQLLYTIKKLELQVESMQSEIKLEEARANEEQQ
KFNTLQDAYSKLVPELTKAKQTVEELKDKEAERVNKATAEELIHRLAMAEEALAAKQFQI
DEMKQTIARQEEELETVAILRAQMELYCSDFHAERAAREKIHEEKEQLAAQLAYLLAEKQ
NHEDLGRNMLAEMQTRHRLPSDQGQPHFSQGGTEDRVWQQQQRSVPIHSCPKCGTILPDM
DTLQIHVMDCII
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagaagccattaaatgggcagtgtagcaagactgaggtggaaaatgggcaccca
agtgtgtcgcctcccccccttggcacatccacggttgaggagatggtccagcagatgaaa
gagctcattactgagaacaatgagcttaaagaagccatgaggcagcgtaatcaagctatg
aaggatcgctttgaagagctttccacgtggagagagaagctgaaggaagagcgggagttc
tatgaaactaaattcaaggaagccaggcagtgtttggcaaccaaatgtgtagagaatgaa
gccctgaaaaagcaactccagactctagaagagagagaggaagggtccacaaagggatgc
acggtttccaaaaaggagatggcccaggagctagagcagctgaggacgcaagtggtgaag
ctacaggctgagaaggctgatctggttgccatcatttcagagctacagcttaaactcaac
atcggaactgaggactcatttgtggagatcaggatgcacgaaggagaattaaacggaggt
gtgaaagaaattcaagaccttcatggcaaaacaatgagggatgcagctcccagtgtatct
ctggatgaagcaaaaaaaaagttggaaaccgaagcgttgactgtcagccagcttcttcat
tccctcaggagcgagatccagaagagagaaggcttggaaaaggagctccaggagcagaag
gaaagacttctgttagaaaataaaactgcagagaaaggcactcagacggaacaggaggag
gaggaaggaaaagagagagcagaaagcgtgggtgatgaaatagagactctaaacctacaa
gtgtctgccctgttcaaagaacttcaggagacgcatgctaaattaaaagatgctgagata
atccagaagaagctgcaagaaaagtgccaggctcttgagagacagcagcatggcggaagt
gctggagacttggatgagaagcagcagctgctgtacaccattaagaagctggagcttcaa
gtggagagcatgcagtcggaaatcaagctggaggaagccagagcaaacgaagagcaacag
aaatttaacacattgcaggatgcttatagcaagcttgtacctgaactgaccaaagcaaag
cagacagttgaagaactaaaagacaaagaggctgaaagggtcaataaggctacagctgag
gaacttattcacagactggctatggcggaggaagccctagctgccaaacagttccagata
gatgaaatgaagcagaccattgcaaggcaagaggaagaactggaaaccgtggctatcctc
cgagctcagatggagctctattgttctgacttccacgctgaacgagcagcacgggagaag
atccacgaggaaaaggagcaattagctgcccagctagcatacttgctggcagagaagcaa
aaccatgaagatcttgggaggaatatgctggcagaaatgcaaactcggcacagactccca
tcagatcaaggccagcctcacttttctcaaggaggaacagaagatcgggtttggcagcag
caacaaaggagtgtcccaatacattcttgtccgaagtgtggaacaattcttcctgatatg
gacacacttcagattcatgtcatggactgtatcatctaa
DBGET
integrated database retrieval system