Zootoca vivipara (common lizard): 118091372
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Entry
118091372 CDS
T07275
Symbol
ERCC3
Name
(RefSeq) general transcription and DNA repair factor IIH helicase subunit XPB
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
zvi
Zootoca vivipara (common lizard)
Pathway
zvi03022
Basal transcription factors
zvi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
zvi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
118091372 (ERCC3)
09124 Replication and repair
03420 Nucleotide excision repair
118091372 (ERCC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
zvi03021
]
118091372 (ERCC3)
03400 DNA repair and recombination proteins [BR:
zvi03400
]
118091372 (ERCC3)
Enzymes [BR:
zvi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
118091372 (ERCC3)
Transcription machinery [BR:
zvi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
118091372 (ERCC3)
DNA repair and recombination proteins [BR:
zvi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
118091372 (ERCC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
AAA_34
AAA_22
Motif
Other DBs
NCBI-GeneID:
118091372
NCBI-ProteinID:
XP_034984194
LinkDB
All DBs
Position
LG1:84791064..84812043
Genome browser
AA seq
780 aa
AA seq
DB search
MGKKERDKKKSKKRHYEEEDEEEYDISGKESQEAVPSAAGKQVEDSSNKIDEYGAKDYRN
QMLLKADHSSRPLWVAPDGHIFLEAFSPVYRYAQDFLVAIAEPVCRPTHVHEYKLTAYSL
YAAVSVGLQTNDITEYLQKLSKTGVPDGIVQFIKLCTVSYGKVKLVLKHNRYFVESTHPE
VIQQLLQDPVIRDCRLRNAEGEETELITETFTSKSAIVKSSEGGSGPSTSQGTDAQGKPG
VPADLFEFYEQMDKDEEEEEETQTVSFEVKQEMIEELQKRCIHLEYPLLAEYDFRNDSVN
PDINIDLKPTAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTAACTVRKRCLI
LGNSAVSVEQWKAQFKMWSTIDDSQICRFTSDAKDKPIGCSIAISTYSMLGHTTKRSWEA
EKVMEWLKSQEWGLMILDEVHTIPAKMFRRVLTIVQAHCKLGLTATLVREDDKIVDLNFL
IGPKLYEANWMELQNNGYIAKVQCAEVWCPMSPEFYREYVAIKTKKRILLYTMNPNKFRA
CQFLIKFHERRNDKIIVFADNVFALKEYAVRLGKPYIYGPTAQGERMQILQNFKHNPKIN
TIFISKVGDTSFDLPEANVLIQISSHGGSRRQEAQRLGRVLRAKKGMVAEEYNAFFYSLV
SQDTQEMAYSTKRQRFLVDQGYSFKVITKLAGMEEEELMFSSKEDQQQLLQKVLQASDMD
AEEEVVAGEYGSKSSQVSRHYGTMSSMSGADDTVYMEFQASRNRASSNKHVHPLFKRFRK
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atgggcaagaaggagcgagataagaagaaatctaagaaacgacactatgaggaagaagac
gaagaagaatatgatatctcaggcaaagagtctcaggaagcagttccctcggcagcaggg
aagcaggtggaagattcctcaaacaaaatagatgaatatggagcaaaagactacaggaac
cagatgctcttaaaggctgatcattcctcacgccccttgtgggtggcccctgatggccat
attttcctcgaggccttttcgcctgtttacaggtatgcccaggattttcttgttgccatt
gctgaaccagtttgccgacccacccatgtccatgaatacaagttgacggcttactccctc
tatgctgctgtcagtgtgggcttgcaaacgaatgatatcaccgaatatttgcagaagcta
agtaagactggagtgccagatgggatcgttcagtttatcaagctttgtacagtcagctat
gggaaggtaaagctggtcctgaagcacaacaggtattttgtagaaagcacccaccctgaa
gtcattcagcagcttctccaggacccagttattagagactgccggctgaggaatgcagaa
ggggaagaaactgaactcatcactgaaacattcacgagtaaatcagctattgtcaaatcc
agtgaagggggaagtggcccttcgacgtcgcaagggacagatgctcagggtaaaccaggt
gttcctgctgacttgtttgagttttacgaacaaatggataaggatgaagaggaggaggag
gaaacccaaactgtgtcttttgaagtgaagcaggaaatgattgaagagcttcagaagcga
tgtatccatctggaataccctctactggctgaatatgacttcagaaatgattcggtgaat
cctgatattaatatagacttgaagccgacagctgtcctccgaccataccaggagaagagt
ttgagaaaaatgtttgggaatggccgtgctagatccggtgttattgtcctaccttgcggt
gctggcaagtcacttgtaggagtaacagctgcctgcacggtgcgcaagcggtgcctgatt
ctgggcaattccgccgtctctgtagagcagtggaaagcccagttcaaaatgtggtccacc
atagacgacagccagatatgccgatttacttctgatgccaaagacaagccaattggctgc
tccatcgctatcagcacttactccatgttggggcacacaaccaagaggtcgtgggaggca
gaaaaagtaatggaatggctgaagagtcaagagtggggccttatgatcctcgacgaagtg
cacaccatacctgcaaaaatgttcaggcgtgtgctgaccattgttcaagcccattgcaag
cttgggctgacagctactctcgtcagagaagacgacaaaatcgtagacttgaatttcctc
attgggcctaaactgtatgaagccaattggatggagctgcagaacaatggctatattgca
aaagtccagtgtgctgaggtatggtgcccaatgtctcctgagttctacagagagtatgtg
gctataaaaacaaagaagaggatattgctctatacaatgaacccaaacaaattcagggct
tgccagttcctgattaagtttcacgagcgaaggaatgacaaaatcatagtctttgcagac
aatgtgtttgctttgaaggagtatgcagttaggctgggcaaaccctatatatatgggcct
acagcacagggggaaagaatgcagatcctacagaatttcaaacataaccccaaaatcaac
accatctttatttcaaaggtaggagacacgtcctttgatctgccagaggccaatgtcctc
attcagatttcgtcccacggcgggtctcgaaggcaggaggctcaaaggttgggtcgagtg
ctgagagccaagaaaggaatggttgcagaagagtacaatgccttcttttattccctggta
tcccaagacactcaagaaatggcatactcaaccaaacgtcaacggtttctagtagatcaa
ggctacagctttaaggtgatcactaaacttgcaggtatggaggaggaagagcttatgttt
tcatccaaggaagatcagcagcagctcctccaaaaggttttgcaagcatcagatatggat
gctgaggaagaggtggttgcaggagagtacggctcgaagtcgtctcaggtttcccggcac
tatggcacaatgagctctatgtctggagcagatgatacagtttacatggaattccaagcc
tcacgaaacagggcctcctcgaataaacacgtccatccccttttcaaacgctttaggaaa
tag
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integrated database retrieval system
