Zootoca vivipara (common lizard): 118091394
Help
Entry
118091394 CDS
T07275
Symbol
CNOT4
Name
(RefSeq) CCR4-NOT transcription complex subunit 4 isoform X1
KO
K10643
CCR4-NOT transcription complex subunit 4 [EC:
2.3.2.27
]
Organism
zvi
Zootoca vivipara (common lizard)
Pathway
zvi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
zvi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
118091394 (CNOT4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zvi03000
]
118091394 (CNOT4)
03019 Messenger RNA biogenesis [BR:
zvi03019
]
118091394 (CNOT4)
04121 Ubiquitin system [BR:
zvi04121
]
118091394 (CNOT4)
Enzymes [BR:
zvi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118091394 (CNOT4)
Transcription factors [BR:
zvi03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
118091394 (CNOT4)
Messenger RNA biogenesis [BR:
zvi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
118091394 (CNOT4)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
118091394 (CNOT4)
Ubiquitin system [BR:
zvi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
118091394 (CNOT4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_4
RRM_1
zf-C3HC4_3
zf-UDP
zf-C3HC4_2
zf-RING_2
Torus
DZR_2
Nup35_RRM_2
zf-CCCH_2
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
118091394
NCBI-ProteinID:
XP_034984239
LinkDB
All DBs
Position
LG9:37897369..37982765
Genome browser
AA seq
765 aa
AA seq
DB search
MSRSPDAKEDPVECPLCMEPLEIDDINFFPCTCGYQICRFCWHRIRTDENGLCPACRKPY
PEDPAVYKPLSQEELQRIKNEKKQKQNERKQKISENRKHLASVRVVQKNLVFVVGLSQRL
ADPEVLKRPEYFGKFGKIHKVVINNSTSYAGSQGPSASAYVTYIRSEDALRAIQCVNNVV
VDGRTLKASLGTTKYCSYFLKNMQCPKPDCMYLHELGDEAASFTKEEMQAGKHQEYEQKL
LQELYKLNPNFLQLSSNAVDKNKNKVTSLQRYDVPNSNNKDAWPSLQSSSKSVNGLTMEH
RKTPPILENGTDSEHMTPDGPDSDFGTIDKPSDSLSIGNCDNSQQISNSDTPSPPPGLSK
SNSVIPISSSNHSARSPFEGAITESQSLFSDNFRHPNPIPSGLPPFPSSPQTSNDWPMAP
EPQSLFTSETIPVSSSTDWQAAFGFGSSKQQEDDLGFDPFDITRKALADLIEKELSVQDQ
PSLSPTSLQNPSPHTTTAKGSGSGFLHPAAPANANSLNSTFSVLPQRFPQFQQHRAVYNS
FSFPGQAARYPWMAFPRNNIMHLNHTANPPSNSNFLDLNLPPQHSTGLGGIPIADNNSSV
ESLNMKEWQDGLRALLPNININFGGLPNATSPSNANHSVPTSNTATTDSLNWDSPGSWMD
PAIITGIPASAGNSLDTLQDDNPPHWLKSLQALTEMDGPSAAPTQTPHSNPFSTQIPLHR
ASWNPYSPPSNPTSFHSPPPGFQTAFRPPSKTPTDLLQSSALDRH
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgcagcccagatgcgaaggaagaccctgtggaatgccccctttgtatggagcct
cttgagattgatgacataaacttcttcccttgcacctgtggttaccagatctgtcgcttc
tgttggcatcgtattcgcactgatgagaatgggctttgccctgcttgcagaaagccatat
ccagaagatccagcagtgtataaaccactctcccaagaagagctgcaaaggataaaaaat
gaaaagaaacagaagcaaaatgagagaaaacagaagatatcagagaatcgtaaacatctg
gccagtgtacgggttgtacagaagaatcttgtattcgtagtagggttatcccaacgccta
gcagatccagaggttttgaaaaggccagaatattttgggaaatttggtaaaatacacaaa
gttgtaatcaacaacagcacatcatatgcaggctcacagggtccaagtgcaagtgcatat
gtaacttacatccggtcagaagatgcactcagagccatacagtgtgtcaataatgtggta
gtagatggaagaacacttaaggcgtctttaggaaccacgaaatattgcagttactttttg
aagaatatgcagtgtcctaaaccagactgtatgtatctacatgaattaggggatgaagca
gccagtttcacaaaagaagagatgcaggctggtaagcatcaagaatatgaacagaagtta
ctccaggaattatacaagttaaaccccaacttcctccagctgtcttcaaatgcagttgac
aagaacaagaacaaagtgacttcactacagaggtatgatgtacccaacagtaataacaaa
gatgcctggccatcattacagagttcaagtaaatcagtcaacggcttaacaatggaacac
aggaaaacgcctcctattttagaaaatggcacagactcagaacacatgactccagatggt
ccagattcagatttcggcactatcgacaaaccttcagattctctcagtataggaaattgt
gataactcgcagcagatatcaaatagtgacacaccttcaccaccacccggcttatcaaaa
tccaattcagtcatccccatcagttcatccaatcacagtgcacggtctccctttgaaggg
gctataacagagtcacagtctctcttctcggacaacttccggcaccccaaccctattcca
agtgggctccctccatttcccagctccccacagacttcaaatgactggcccatggcacca
gagccacagagcctcttcacatcagaaaccatcccagtatcctcgtctacagactggcaa
gcggcgtttggatttggttcttccaaacagcaagaagatgacttggggtttgatcccttt
gatatcacccgcaaagccttagcagacctgatcgagaaggaactgtcggtccaagaccaa
ccctccctctcgcccacgtctctccagaacccttccccacacactacaaccgccaaaggg
tcaggctctggatttctgcatcctgctgcgcccgcaaatgccaactctctcaatagcaca
ttttcagtcttgccacagaggttcccgcaatttcaacagcatcgagcagtttacaactcc
ttcagttttccaggccaagctgctcgctatccttggatggccttcccacgcaataacatc
atgcacttgaaccacacagcaaatcccccttcaaatagtaatttcttggacttaaacctc
ccaccacaacacagcacaggtctaggagggatccctatagcagacaacaacagttctgta
gagagtttaaatatgaaggaatggcaggacgggctaagggcacttctaccgaacattaac
atcaactttggtggactgcccaatgctacttccccctccaacgccaaccacagtgtacca
acatccaacactgccaccaccgacagcctgaattgggacagccctggcagctggatggac
cccgcaatcatcacaggtatcccagcctccgctggaaacagtttagacacccttcaagac
gacaatccaccacactggctaaaatctcttcaggctctcacagagatggatggccccagt
gctgccccgacacagaccccccacagtaaccccttcagcacacagattcctctgcacaga
gccagttggaatccttactccccaccttcaaaccccaccagttttcactctcctccccca
ggctttcagacagctttcagaccccccagtaaaacccccacagatctactacagagctca
gcgctggatcgtcattag
DBGET
integrated database retrieval system
