Zootoca vivipara (common lizard): 118091690
Help
Entry
118091690 CDS
T07275
Symbol
TOPBP1
Name
(RefSeq) DNA topoisomerase 2-binding protein 1
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
zvi
Zootoca vivipara (common lizard)
Pathway
zvi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
zvi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
118091690 (TOPBP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
zvi03032
]
118091690 (TOPBP1)
03400 DNA repair and recombination proteins [BR:
zvi03400
]
118091690 (TOPBP1)
DNA replication proteins [BR:
zvi03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
118091690 (TOPBP1)
DNA repair and recombination proteins [BR:
zvi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
118091690 (TOPBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
PTCB-BRCT
BRCT_2
TopBP1_BRCT0
LIG3_BRCT
RTT107_BRCT_5
BRCT_TopB1_SLF1
ECT2_BRCT0
Motif
Other DBs
NCBI-GeneID:
118091690
NCBI-ProteinID:
XP_034984783
LinkDB
All DBs
Position
LG10:complement(46210661..46241745)
Genome browser
AA seq
1470 aa
AA seq
DB search
MKNSKEPYFVKFIKSAENSEFFLQALESIKEFQSEESLQILENTAALRIQENDKSLYICD
QFSGIVFNHLQKLGCRIVGPQVVVYCMQNQRCVPRADHPVFNMTMADVTISCTSLQKETR
EEVHKYVQMMGGRVYRDLNVSVTHLIAGEVGSKKYLVAANLKKPILLPSWVKALWDKSQH
RMFRYTDLNMGDYLCPLFLGCTICVTGLSSADRKAVQRITIENGGQYTGQLKMNECTHLI
VQEPKGQKYECARRWNVHCISAQWFFDSIEKGFCQDESMYTVDLKAKQETAPSTSTPTSL
TSKPDSRTLSDVSHISNINLSGVNETSCNSTMNSRLDPSSDDLNSLDTSSLQAPEDLLDG
CRIYLCGFSGRKLDKMRKLINSGGGVRFNQLNEDVTHVIVGDYDDDELKLFLKKTTQRPY
IVTAKWLLECFRKGYLLPKDQYTSENYQPLNSPVLEQPIFPKRSSLSKKEVVKTVLAPEA
DEALLSQYSANESTVVDANNYSDIDHTAFQEEKEFSASHNSLAETSTVVEGALFNRKRFI
LLGFGKEDESCMRPLIEENGGKVLSQQSKAIADYAVVPLLGYKVEATVGDVVTNTWLVTC
LEQQSLLDPQSSPLFTPVPVKEGNTPLQQCVLSFSQFNGAERDSLIYLAHLLGARVQEFF
VRKANPRKGMLVSTHLVVKEPEGSKYEAAKKWNLPAVTMAWLLESARTGKKADDSKFLID
NVDTEECFTNHPAEAGTDSASPNTCDHPSSLLEIGRRTAVTPLDMNRFQSKAFQRVVSSH
HIDNKPSPSQAGKPVQKEPSLHLDTPSKFLSKDKLFKPSFDVKDALAALETPGSSNPQKR
KLSTPLSEVIGRNLKVALANSTRQAAALTASPRLKVATQQVEEEPKPLADVVICVSKKLS
KKQSELNAIAASLGADYRWCFDETVTHFIYQGRQNDSNREYKSAKERGIHVVSEHWLLES
AQEYKRLPESLYPYTYNPKMSLNISGIQDDRFSDRLDSAEKTGKEDEKMALDTNDREDVT
MDQVTEAVSVEKENASKGVLTQTLEMRENFQRQLQEIMTATSLAKFQGQRKSLSRNGFDN
SPTTPDGPRSVRNGRSRVLEALRQSHQVAMDVNTEPSQSEQIIWDDPTAREERARLASNL
QWPSSPSQCSEQIQPLAVNAGDLSLTKSFTDTEIAEMEVDEPAKTDWVEVPKLPGCRNPE
IPVKEDNLIPTPLAPAIAFPLANPPVAPQPKTNVIRVDQMTAEEPKKEYRFQLSSVRPQA
RIDYYHMIEELGGVVLEKQCFDPRCTHTIVGHPIGNEKFLASMAAGKWVLHCSYLDACRT
VQCFLPEEDFEWGNNSILNAASEITESQKNLAVAAMRWRKIIQRRREEAGITEGAFRGWK
VILNVDPAKEAGFKRLLESGGAKVLPAHSDSVFSEATHLFADFNKLKPVDLRVNLGEASA
HGVNCLKPEYIADYLIQEQPPQMEGYRLPL
NT seq
4413 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatagcaaggaaccatattttgtgaagtttataaagtctgcagaaaactcagaa
tttttccttcaggcccttgagtccatcaaagaatttcagtctgaagaatctctccagatt
cttgaaaatacagctgcactgaggatacaagagaatgacaaatccctttatatttgtgat
cagttcagtggcattgtttttaatcaccttcaaaagcttggttgcagaattgttggacca
caagtagttgtctactgtatgcagaaccagcgatgtgtgccaagggccgaccatccagta
tttaatatgacaatggctgatgtaactatatcctgtacaagccttcaaaaagaaactagg
gaagaggtccacaagtatgtgcagatgatgggcggccgtgtatatagagatcttaatgtg
tcagtaacacatcttatagcgggagaagtcggaagcaagaaatatttagttgctgctaac
ttaaaaaaacccattttgcttccctcttgggtaaaagcattgtgggataaatcccaacat
aggatgtttagatatacagacctcaatatgggagactacctatgccctttgtttcttggt
tgtacaatctgtgtgactggtttaagcagtgcagaccgaaaagcagtccagcgtatcact
atcgagaatggtggtcagtatacagggcaacttaagatgaatgaatgtacccatcttatt
gttcaagaaccaaaagggcagaaatatgaatgcgcaagaaggtggaatgtccactgcatt
tcagcccagtggttttttgacagcattgagaagggattttgccaggatgaatccatgtat
acagtcgaccttaaagcaaagcaagaaactgcaccaagcacatcaactcctactagccta
actagcaagcccgatagtcgaacactctcagatgtcagccacatttcaaatattaattta
agcggtgttaatgaaacctcttgtaattctactatgaatagcaggctggatccctcttca
gatgacctgaacagcttggatacaagttctttgcaagcacctgaagatttgctagatgga
tgcagaatttacctttgtggctttagtggcagaaaattagataagatgagaaagcttatt
aactctggaggtggtgttcgttttaatcaactcaatgaagatgtgacacatgtcattgtg
ggcgactatgatgatgatgaacttaaactgtttttgaagaagaccacacagaggccatat
attgtgacagcaaaatggttgttggaatgctttagaaaaggttatttactacctaaggat
cagtacacttcggaaaactatcagccacttaacagtccagttttagagcagcctatcttt
cctaaaagaagcagtctttcaaagaaagaagttgtgaaaacagtgctggctccggaagcg
gatgaagctcttctgtctcagtattcagctaatgagtccacagtagttgatgccaataat
tacagtgatattgatcacactgcctttcaagaagaaaaagagttcagtgccagccataat
tccttggcagaaacttctacagtcgttgaaggagccttgttcaacagaaagaggttcatc
cttctgggttttggtaaagaggatgaatcctgcatgaggcctctgattgaagagaatggt
gggaaggttctgtctcaacaaagtaaagctattgctgactatgctgtggttcctctactt
ggctacaaggtggaagcaactgtaggagatgtggttacaaatacatggctggtgacgtgt
ttggaacagcagtccctattagatccccaatcaagtccacttttcacacccgtgccagtg
aaggaaggaaacactccgttacaacaatgtgtattgtctttcagtcagtttaatggggca
gaaagagattctttaatatatttggcacatttgcttggggcaagagtgcaagaattcttt
gtgagaaaagccaacccaaggaaaggaatgcttgtcagcacccacctggtggtgaaagag
ccggaaggttcaaagtatgaagctgccaagaagtggaaccttcctgctgttactatggct
tggctgctggagtctgcaaggacaggaaagaaggctgatgacagcaagttccttattgac
aatgtagacactgaagagtgtttcacaaatcatccagctgaggcagggacggattcggca
tctccaaatacatgtgaccatcccagcagcctccttgaaattggaagaagaacagctgtg
acacctctggatatgaatcggttccagagtaaagctttccagagggttgtatcatcacat
catattgataacaagccaagcccttcacaagcggggaaaccagtacagaaggaaccatcc
ctgcatcttgacacaccatctaaatttttatctaaagacaagctgttcaaaccttctttt
gatgtaaaggatgcactagcagctttggaaactccagggagctctaatccacaaaaaaga
aaactgagtactcctctttcagaagtcattggcaggaacttaaaagtggctttagcaaac
agcactcggcaagcagctgctctcactgcaagccctcggttgaaagttgcaactcaacaa
gtggaagaggagccaaagcctctagctgatgttgtcatatgtgtgagtaagaagctcagt
aaaaagcagagcgagctgaatgccattgctgcttcccttggagcagattacaggtggtgc
tttgatgaaactgtaactcatttcatctaccagggaaggcaaaatgatagtaaccgggaa
tacaaatctgctaaagaaaggggcatacatgtagtgtcggaacactggcttttggagagt
gcacaagaatataaacggctgcctgaatctctctatccttacacatataaccctaaaatg
agtttgaatattagtggtattcaagatgacagattctcagatcggctagattcggctgaa
aaaacagggaaggaagacgagaaaatggcgttggatactaatgatagagaagatgttact
atggatcaagtgactgaggcagtttctgtggaaaaagagaatgcatcaaaaggagtttta
acacagacactggaaatgagggagaactttcaaaggcagctacaggaaatcatgactgca
acatcactagcaaagtttcaaggacaaagaaaatctttgtctaggaacggctttgacaat
tctccaacaactccagatggccctcgttctgtccgtaacggccgtagccgagtcttggaa
gccctaaggcagtcacaccaggtagcaatggatgtcaacacagaaccatcacagagtgaa
cagattatttgggatgaccccactgcaagagaagagagggcaaggcttgctagtaacctt
cagtggcccagcagcccctcacagtgttctgaacaaattcaacctcttgcagtaaatgct
ggagacctctcgcttacaaaatcctttaccgatacggaaattgctgaaatggaagttgat
gaacctgcaaaaacagattgggttgaggtcccaaagcttccaggctgtagaaatccagaa
atccctgtgaaagaagataatctgatcccaactccgctggctcctgccattgcctttcct
ttggcaaatcctcctgtggctcctcagccaaaaacaaatgtcattagagtagaccaaatg
actgctgaagaaccaaaaaaagagtacagattccagctgtcttctgttcgccctcaggca
cggattgattattaccatatgattgaagagctgggtggagtggtgcttgagaagcagtgc
tttgaccctaggtgtacccacacaatagtggggcaccctattggcaacgagaaattcttg
gcatcaatggcagctggaaagtgggtacttcattgctcctacctggatgcatgcagaaca
gtacaatgctttctaccggaggaagattttgaatggggaaataattccatactcaatgct
gcatctgaaataactgaatcccagaagaatttagcagttgcagcaatgaggtggaggaaa
ataatacaaagacggcgagaggaagctggcattactgagggggcatttcgtggttggaag
gttattttgaatgttgacccagccaaggaagcaggcttcaaacgtcttctagagtcaggc
ggagcaaaggtgctgcctgctcattctgattctgtgtttagtgaagccacccatcttttt
gctgattttaacaagctgaagccagtggatttaagagttaatttaggagaggcttctgct
catggagtgaactgcctgaagccagaatacattgctgactatcttatacaggagcaacca
cctcaaatggaaggttatcgtttgccattatga
DBGET
integrated database retrieval system
