Zootoca vivipara (common lizard): 118091874
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Entry
118091874 CDS
T07275
Symbol
VIM
Name
(RefSeq) vimentin
KO
K07606
vimentin
Organism
zvi
Zootoca vivipara (common lizard)
Pathway
zvi04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
zvi00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
118091874 (VIM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zvi03019
]
118091874 (VIM)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
zvi04812
]
118091874 (VIM)
04147 Exosome [BR:
zvi04147
]
118091874 (VIM)
Messenger RNA biogenesis [BR:
zvi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
118091874 (VIM)
Cytoskeleton proteins [BR:
zvi04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type III
118091874 (VIM)
Exosome [BR:
zvi04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
118091874 (VIM)
Exosomal proteins of other cancer cells
118091874 (VIM)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
Filament_head
DUF1664
TolA_bind_tri
CCDC22_CC
DUF4407
LAMB4
Sec10_N
Motif
Other DBs
NCBI-GeneID:
118091874
NCBI-ProteinID:
XP_034985297
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All DBs
Position
LG10:complement(23579721..23594037)
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AA seq
461 aa
AA seq
DB search
MSTTSSSRSSYRRMFGGGGRPSSSSSGSRYVTSSSRYSLGSARPSSIRLSSAPGGGGVYS
SKAVRLRSSLPPMRLLGDGGMDFSLADAINTEFKANRTNEKAELQELNDRFANYIDKVRF
LEQQNKILLAELEQLKGKGTSRLGDLYEEEMRELRRQVDQLTNDKARVEVDRDNLAEDIM
RLREKLQDEMLQREEAENNLQSFRQDVDNASLNRLDLERKVESLQEEIIFLKKLHDEEIR
ELQAQIQEQHIQIDVDVAKPDLTAALRDVRQQYESVASKNLQEAEEWYKSKFADLSEAAS
RNNDALRQAKQEANEYRRTIQSLTCEVDALKGTNESLERQMREMEENFNLEAANYQDNIA
RLQDEIQNMKEEMARHLREYQELLNVKMALDIEIATYRKLLEGEESRITMPIPTFASLNL
RETNLESIPIDTHSKRTLLIKTVETRDGQVINETSHHDELE
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgagtaccaccagcagcagccggagttcctaccgccgtatgttcgggggcggcgggcgg
cccagctcttcgagcagcgggagccgctacgtgacgtcgtcgagtcgctactcgctgggc
agcgctcggcccagcagcatccgcctgtcgtcggcgcccggtggcggcggggtctactcc
tccaaggccgtgcgcctgcggagcagcctgccgccgatgcggctgctgggcgatggcggc
atggacttctctctggccgacgccatcaacacggagttcaaggccaaccgcaccaacgag
aaagccgagctgcaggagctcaacgaccgcttcgccaactacatcgacaaggtgcgcttc
ctcgagcagcagaacaagatcctgctggccgagctcgagcagctcaagggtaaaggcacg
tcccgcctgggcgacctctacgaggaggagatgcgcgagctgcgccggcaggtggaccag
ctcaccaatgacaaggcccgcgtggaggtggaccgcgacaacttggccgaagacatcatg
cgcctgcgggaaaaacttcaagatgagatgcttcagagggaagaagctgagaacaacctg
caatctttcagacaggatgttgacaatgcctcattgaaccgtctggatcttgaacgcaaa
gttgaatctctgcaagaagagattatcttcttgaagaagctccacgatgaggaaatccgt
gagcttcaggcccagatccaagaacaacatatccagatcgatgtggatgttgccaaacct
gatctcactgctgccctgcgcgatgtgcgtcaacagtacgaaagtgttgcttctaagaac
ctccaggaagctgaagagtggtacaagtccaaatttgcagatctgtccgaagcagcctcc
cggaacaatgatgccctgcgccaggccaaacaagaagcgaatgagtaccgcaggacaatt
cagagtctcacctgtgaagtggatgcacttaaaggaactaacgaatccctggaacgccag
atgcgtgagatggaggagaactttaatcttgaagctgctaactaccaagacaacattgcc
cgactgcaggacgagatccaaaacatgaaggaagaaatggctcgccatctgcgcgagtac
caagaactgctgaatgtaaagatggctcttgatattgagattgccacttacaggaaactg
ctggagggagaagagagcagaatcacaatgcccattccgacttttgcttccctgaacctg
agagaaacaaaccttgagtctatcccaatcgacacccactccaagagaacacttcttatc
aagactgttgaaactagagatggacaagttatcaatgaaacttctcaccatgatgaactg
gagtga
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integrated database retrieval system