Zootoca vivipara (common lizard): 118092889
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Entry
118092889 CDS
T07275
Symbol
HCN4
Name
(RefSeq) potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 4
KO
K04957
hyperpolarization activated cyclic nucleotide-gated potassium channel 4
Organism
zvi
Zootoca vivipara (common lizard)
Brite
KEGG Orthology (KO) [BR:
zvi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
zvi04040
]
118092889 (HCN4)
Ion channels [BR:
zvi04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (HCN)
118092889 (HCN4)
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GFIT
Motif
Pfam:
Ion_trans
Ion_trans_N
cNMP_binding
Ion_trans_2
LPD1
Motif
Other DBs
NCBI-GeneID:
118092889
NCBI-ProteinID:
XP_034987437
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Position
LG11:44699535..44811403
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AA seq
1230 aa
AA seq
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MDRLPPSMRKRLYSLPQQIGPKASIMDEEDEEAGGGGRGCSSGADKDARRKSIKLRPLAP
PPPGGARGQGAGEPSSGKSSTNGDCRRFKGSLSSLASRHPHDSGEERRLISSEGDAASPG
DERSPPDLSDTEPGPPALSTPAAASSCSSPPDPPPPPSSSAFVKVEGGGGPDGAGGGADQ
ITPDDEQRLGQAGFMQRQFGAMLQPGVNKFSLRMFGSQKAVEREQERVKSAGFWIIHPYS
DFRFYWDLTMLLLMVGNLIIIPVGITFFKDENTTPWIVFNVVSDTFFLIDLVLNFRTGIV
VEDNTEIILDPQRIKMKYLKSWFVVDFISSIPVDYIFLIVETRIDSEVYKTARALRIVRF
TKILSLLRLLRLSRLIRYIHQWEEIFHMTYDLASAVVRIVNLIGMMLLLCHWDGCLQFLV
PMLQDFPDDCWVSLNRMVNDSWGKQYSYALFKAMSHMLCIGYGQQAPVGMSDVWLTMLSM
IVGATCYAMFIGHATALIQSLDSSRRQYQEKYKQVEQYMSFHKLPAEMRQRIHDYYEHRY
QGKMFDEESILGELSEPLREEIINFNCRKLVASMPLFANADPNFVTSMLTKLRFEVFQPG
DYIIREGTIGKKMYFIQHGVVSVLTKGNKETKLADGSYFGEICLLTRGRRTASVRADTYC
RLYSLSVDNFNEVLEEYPMMRRAFETVALDRLDRIGKKNSILLHKVQHDLNSGVFNYQEN
EIIQQIVQHDREMAHCAHNVQAAAAAAASTPVIWTPLIQAPLQAAAATTSVAIALTHHPR
LPAAIFRPPVSVLGSLGQAPNQTPRQLRRLHSLVSSAGPSIVGSPSSTQSQQHTLGADSL
SSSSFQIQQLAGFTASAGLGQFHRASASSPSAASTQQQPLGSPSSAGLSLFHQGPLDSPE
GVAQQQAPDSNLLSGFGPFQKAPASSPSTAFPQLSSNSPSSPLGHTQAACSNKPAQPGQA
QQLSGTGALGGTNHFPLPPSSSSPPSSLSQLAQASGGSPSASCQTQPSALGPSASPAATV
AQLHHERSPFASMSPLKQPAGAPPPLFPPSGLSPPSQCAAARTLQCAPSGARGSHGSLLM
PQTSSPPLQGLQPRSTPPPPLPPGRLSQDLKFISASHPSLPHKTAQTLSRGSSPHSSRES
VSSFSSFSGGGGAGGGGTRPLGKPYSSVPGRVTLPRQMSSGSLPPPPAFEASCAIPPPLT
AIVTAVEGRKGSIGLTGEREPIRSKLPSNL
NT seq
3693 nt
NT seq
+upstream
nt +downstream
nt
atggacaggctgccgccgtcgatgcgcaagcggttatacagcctcccgcagcagatcggc
cccaaagcgtcgatcatggacgaggaggacgaagaagccggtggaggaggaagaggctgc
agtagcggcgccgacaaggacgcccgtcgcaaaagcatcaagctgaggccgttggcgccg
ccgccgccagggggagctcgtgggcaaggggcaggagagccctcgagcggcaagagcagc
accaacggggactgccggcgtttcaaggggagcctctcgtctctggccagccgccaccct
cacgactcgggcgaggagcgccgcctgatcagcagcgaaggggacgcggcgtcccccggc
gacgagcgcagccccccggacctgtcggacaccgagccgggaccccccgctttatcgacc
ccggcggcagcctcgtcctgctcgtccccgccggaccctccgcctccaccctcttcgtcc
gccttcgtgaaagtggaagggggcgggggtcccgacggggcgggagggggcgccgaccag
atcaccccggacgacgagcagaggctgggccaggccggcttcatgcagaggcagtttggg
gctatgctgcagccgggggtcaacaaattctccttgaggatgtttggcagccaaaaggcc
gtggagagggagcaggaaagggttaagtccgccggcttctggatcatccacccgtacagc
gatttcaggttttactgggacttgacgatgctgctcctgatggttggcaacctgatcatc
atcccggtgggcatcaccttcttcaaggacgagaacaccaccccatggattgttttcaac
gtggtctcagacaccttcttcctcattgacctggtcctcaatttccgcacagggattgtg
gtggaagacaacacggagatcatccttgacccgcagaggattaaaatgaagtacctcaag
agctggttcgtggtggattttatctcctccattccggtggactacatcttcctgattgtg
gagacgcgcatcgattcggaggtttacaaaacggcccgagccctgcggatcgtgcgcttc
accaaaatcctcagcctcttgcggcttctgaggctttccaggctcatacgctacatccat
cagtgggaggagatcttccacatgacctatgacctggcaagtgccgtggtgcggatcgtg
aacttgatcggcatgatgctgctgctgtgtcactgggacggctgcctccagtttctggtg
ccaatgctccaggacttccctgacgactgttgggtttcgctgaatcgcatggtgaatgac
tcctgggggaagcaatattcctatgcgctgttcaaggctatgagccacatgctgtgtatc
ggctatgggcagcaagccccagtgggcatgtccgacgtatggctcactatgctgagcatg
attgtcggggccacctgctatgccatgttcatcggccacgccacagccctcatccagtct
ttggactcctcgcgtcggcagtatcaggagaagtacaagcaagtggagcagtacatgtcc
ttccacaagctcccagctgagatgcgccagaggatccacgactactacgaacaccgctac
cagggcaaaatgtttgacgaggagagcatcctgggagagctgagtgagccactgagggag
gagatcatcaacttcaactgccggaaacttgtggcctccatgcctctgtttgccaacgca
gaccccaattttgtaacatccatgctgaccaagctgcgttttgaggtgttccagccgggc
gactacatcatccgggaagggacgatcggaaagaagatgtattttatccagcacggggtg
gtgagtgtgctcaccaaaggcaacaaggagaccaagctggctgatggttcctactttgga
gaaatttgcctgctgactcgtggccggcggacagcaagtgtgagagccgacacttactgc
cgcctctactccctctcggtggacaactttaatgaggtgcttgaggagtatcccatgatg
agaagggcttttgaaacggtggccctggacagactggacagaattgggaagaagaactcc
atcctgctccacaaagtccagcacgatctcaactcgggcgtcttcaactaccaggagaac
gagatcatccagcaaattgtgcagcatgaccgagagatggcccactgtgcgcataacgtc
caggctgctgccgccgctgccgcatcaacgccggttatctggacaccactgatccaggcc
cctttgcaagccgcagcggccaccacgtctgtagcaatagctctcacccaccaccctcgc
ctcccggcggccattttccgcccgcctgtctctgttctgggttctctggggcaggccccg
aaccagactccgaggcagctgaggagacttcactccttggtgtcttcagccgggccttcc
atcgtgggctccccttcaagcacgcaatcccagcagcacaccctgggggcagacagcctc
tcgtcatcgtccttccagatccagcagctggctggcttcacagcctcggccggcttgggc
cagttccaccgggcttcagccagctctccgtcggctgcctcgactcagcagcagcccttg
gggagcccgtcctcggcaggcctgagcctgtttcaccaggggcctttggattccccagaa
ggggtggctcagcagcaggctcccgacagcaatctcctgagcggctttggccccttccag
aaggcccctgctagttcgccatccaccgccttcccccagctgtcctccaattcccccagc
agcccccttggccacacgcaagccgcttgcagcaacaagcctgcccagccaggccaggcc
cagcagctctcaggaactggagccctgggagggacgaaccactttccgttgcctccctcc
tcaagctcaccaccctccagcttaagccaactggcacaggcctccggaggctccccgtcg
gcctcgtgccaaacccagccaagtgcattaggcccttctgcttctcctgctgcgaccgta
gctcagttgcaccacgaaaggtcaccctttgcctctatgtctcctttgaaacagcccgcc
ggtgcccctcctccgctgttcccgccctcaggtcttagccctcctagtcaatgtgctgca
gccaggactttgcagtgtgccccttctggggcaaggggctcccacggatctctgctgatg
cctcagacctccagtccccctctacagggccttcagcccaggagtacaccgccgccaccg
cttccaccgggacggttaagccaggacctcaagttcatctctgcttcccatccatctctg
ccccacaaaacggctcagactttaagccgaggctcttctccccactcctctagggaatct
gtttctagtttctcatctttctctggaggagggggagcaggaggcggagggacgaggcct
ctagggaagccatacagctctgttccagggcgagtgactctaccacgtcagatgtcctca
ggttcactgcctccgccacctgcatttgaggccagttgtgccatccccccacctctgact
gctatcgtgactgctgttgaagggaggaaagggtctatagggctcactggggaacgagag
cccatccgatcgaaactgccctccaatttgtga
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