Zootoca vivipara (common lizard): 118093125
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Entry
118093125 CDS
T07275
Symbol
CIITA
Name
(RefSeq) MHC class II transactivator isoform X1
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
zvi
Zootoca vivipara (common lizard)
Brite
KEGG Orthology (KO) [BR:
zvi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
zvi01001
]
118093125 (CIITA)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
zvi04054
]
118093125 (CIITA)
Enzymes [BR:
zvi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
118093125 (CIITA)
Protein kinases [BR:
zvi01001
]
Serine/threonine kinases: Other
TAF1 family
118093125 (CIITA)
Pattern recognition receptors [BR:
zvi04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
118093125 (CIITA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
LRR_6
LRR_4
NLRC4_HD2
LRR_8
LRR_14
LRR_9
nSTAND_NTPase5
DUF7885
NB-ARC
PEPCK_N
AAA_16
Motif
Other DBs
NCBI-GeneID:
118093125
NCBI-ProteinID:
XP_034987827
LinkDB
All DBs
Position
LG11:8275067..8320999
Genome browser
AA seq
1163 aa
AA seq
DB search
MDLFGKILPGVRGIVCDASPTQIQALLNLMLEGGVISKEYYQTLLHEKDREDLARKISLT
LVEKSAMQLSQHGAASARSMSSDTMDPGVLAGKSCLDLLFSDIDIPVLYKQVVETEPDDQ
ENNPDLFYTVESNESGEQVCLCADTGEAYDKIASLAEYVLKDQQEKPEEDLFGNLVLDEA
AAETPGEAEKRGSCSDPPEPKRRKLGHPPALCVVSGNCITIPLSCSPADTLSPPDFHMAF
SVTTISPAFEPLASPNLYYCPLGVEDIQVVFAFEPLNQRVNILAEPEGAVINACPDVAVV
DKGPGAPPVPSEQAHKRPGPVDAFRRRLKDHFRETCQFAPMEREFALDRLYIERDLALCL
VESKNAGKNADLRPCNLREKGKVAGSSQLFQLPWKNNQGTKVIVVLGKAGMGKSLLVQKI
CLDWSRGLLPNYGFLFRFDCRMLGLLPENRYSLKQLLFELSAGPQDGGDDIYRHVLRYPE
KVLLIFDGFEELKDRDGLTPGVDSLPHKEPLDIGGILASIFQKKVLGGCTVLLTSRPKDK
LQQHLSKVDAALELAGFSTQQAESYIAQYFEGSPCCGETVALIRNCPYLFSHCYTPDLCR
FVCEAVSEVGGKELPSTLTGLLAKFLLQKLMRSSTPKHQNIAALAQVAWSSGEDHRNALM
SYNFPSTEVKEFALSCGLVAPLAFPKDSSSGKEECGYVFPSFVVQNFLVALHLVLAKEIK
DKTLTKYLRLLSKSKKFLSSWSLVPCFLSGLLFLGGKLSSSVLFREEGEMDTKRMATKKQ
RSFSKYVRKLMERNLSPDKLLDLLHCLHEAGDPCLLKQMALELKCDLSFLGFALTPPHVY
ILHSVIKQAKRKFALDLRGSAIDSEGFRQLVTLKNVASFRASLSDAVRLWRQLWEAEETD
QLQSAVEKFMVVPFKAKTMRDIDDLCALVDMQEKMTQSEAESAGGSIRLLPAVAELKQLE
FTLGRVCGLTGFRKLVGILGTFPALQHLDLDSPNENEIGDEGVSSLTSVLPRLSYLETLN
LSGNKITDLGAEKLAKALPSLRSLKTLSLYNNNIGDAGAEHFARVLPETASLRVLDIHCN
KITAAGAQHLTDSLRKCPHVQSVALWNPTIPHGLLDHLRQLDSRISYSRSSKTRAKQAWD
FEMRTSFRTEDEELDILHGVLHE
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
atggatctcttcgggaagatcttgccaggggtgagaggaattgtctgtgacgcgtcgccc
acccagattcaggcgcttttaaacctcatgttggaaggaggagtcatatccaaggaatac
taccaaacgctgctccacgaaaaagacagagaggatctagcaaggaagatttcgttgacc
ttggtggaaaaatcagccatgcaattgagccaacatggtgctgcgtcagctagaagcatg
agtagtgacaccatggacccaggcgtcctggctgggaagagctgcctggacctgctgttc
agtgacatcgacattccggttctgtataagcaggtagtggaaacagaacctgacgatcag
gaaaacaaccctgatctcttttacacagtggaaagtaatgagagtggagaacaagtctgc
ctgtgtgcggacactggagaggcctatgataaaatagcttccttggcagaatacgtgcta
aaagaccagcaagaaaaacctgaggaagatctgtttggaaacttggttctagatgaagca
gcggctgaaaccccaggggaggccgagaaacggggcagctgctctgatcctccagagccc
aaacgcaggaaactcgggcatccaccggctctctgcgtcgtcagcggcaattgcatcact
atccctctgagctgctccccagctgacactctctcgccgcccgacttccacatggcgttt
tcggtgaccaccatcagccctgcctttgaacctcttgcaagccccaacctgtactactgc
ccgctcggcgtggaagatattcaggtagtctttgccttcgagcctctcaatcagcgcgtg
aatattcttgctgagccagaaggtgccgtcattaatgcctgtcctgatgtagctgtggtt
gacaaaggacctggagccccacctgttccttcagagcaagctcacaaacgaccaggccct
gtggatgcgtttcgcaggaggctaaaagaccacttccgggagacatgccaatttgcgccc
atggagcgagagttcgccctggaccgcctttacatcgaacgcgacttggcgctgtgcctc
gtggaaagcaagaacgccgggaaaaatgccgacctgaggccctgcaaccttagagagaaa
gggaaggttgcggggagcagccagctctttcagctgccgtggaagaacaaccagggaacc
aaagtcatcgtcgtcttggggaaagccggaatggggaaaagcctgctggtccagaagatc
tgcctggactggtccagaggccttttgcccaattatggcttccttttccgattcgattgc
cggatgctgggcctcctccctgaaaaccgctacagcctcaagcagctgctgtttgagctc
tccgctgggcctcaagatggcggtgacgacatctataggcacgtcctgcggtacccagaa
aaggtcctcctcatttttgatggttttgaagagctgaaggaccgggatggcttaacacct
ggtgtggacagcctgccccacaaggagcccttggatattggaggcatcttggccagtatc
ttccagaagaaggttctcggcggctgcacggtactgctaacctcccgccccaaggacaag
ttgcagcagcatttatcgaaggtggacgcggcgctcgaactggcagggttctccacgcag
caagccgagtcctacattgctcagtacttcgaaggatcgccctgctgtggcgagacggtg
gctttgatcaggaactgcccttacctattcagccattgctacactcctgacctgtgtcgg
ttcgtttgcgaggctgtgtctgaagtggggggcaaggaactgccttccacgcttaccggc
ctgttggccaagttcctactccaaaaactgatgcgttcctcaacccccaagcaccagaat
atcgccgctttagctcaggtggcctggtcttccggagaggaccaccggaacgcactcatg
agctacaactttccgtccacggaagtgaaggagtttgctctcagctgcggactggtggcc
cccctcgcattcccgaaagactcgagcagcgggaaagaggaatgtggctatgtgttccct
agctttgtggtccaaaatttcctggttgcgctgcatttggtgctggctaaagagatcaag
gacaaaacgctcaccaaatacctccggctgctctccaaatccaagaagtttctctcctct
tggagcttggtaccttgttttttgtccggcttgctgtttttagggggcaagctgagctcc
tctgtccttttcagagaggagggggagatggacaccaagagaatggccaccaagaagcag
agaagcttctcgaaatacgtccggaaactcatggagcgtaatttgagtccggacaagctc
cttgatctcctccactgtctccacgaagcgggagatccttgccttttgaagcaaatggct
ttagaactcaagtgtgacctctctttcttggggtttgctctcacgccaccccatgtctac
attctccactctgtcatcaaacaagccaaaaggaagtttgctttagatttgagagggagc
gccattgactcggaaggattcagacagctggtcaccctgaagaatgttgcatcgttcagg
gcatccctcagcgatgcagtccggctctggaggcagttgtgggaagccgaggaaacagac
caactgcaatctgccgttgagaagtttatggttgttccgttcaaagccaagacaatgagg
gacattgatgatctctgtgctcttgtcgacatgcaggagaaaatgacccaaagcgaggca
gaatcagctggtggtagcatccgcctcctccctgccgtcgcagagcttaaacaattagaa
ttcacattgggtcgtgtctgtggcttgacgggcttccgaaagctggtggggatcctgggc
acatttcctgccctgcaacatttagacttggattctcccaacgagaacgagatcggagac
gaaggagtgtctagcctcaccagcgtccttcctcgcttgtcctacctggaaacattaaac
ctgtcggggaacaaaataacagacctgggggcagagaagttagccaaagcgcttccgtca
ttgcgttcgctgaagacactaagcttgtacaataataacattggagatgctggggcagaa
cattttgccagagtgctcccagagacagcttctttgagagtgcttgacatccattgcaac
aagataactgctgctggagctcagcacctgacggacagcttgagaaaatgcccccacgtc
cagagtgtggcgctatggaaccccactattccccatggacttctagatcacctgcggcag
ctggattcccgaatcagttactctagatccagcaaaaccagggccaaacaagcttgggat
tttgaaatgcgcacatcctttcgaacggaggatgaggagcttgacattttgcatggagtg
cttcatgaatga
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integrated database retrieval system
