Zootoca vivipara (common lizard): 118093204
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Entry
118093204 CDS
T07275
Symbol
RORA
Name
(RefSeq) nuclear receptor ROR-alpha isoform X1
KO
K08532
RAR-related orphan receptor alpha
Organism
zvi
Zootoca vivipara (common lizard)
Brite
KEGG Orthology (KO) [BR:
zvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zvi03000
]
118093204 (RORA)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
zvi03310
]
118093204 (RORA)
Transcription factors [BR:
zvi03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
118093204 (RORA)
Nuclear receptors [BR:
zvi03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
118093204 (RORA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
118093204
NCBI-ProteinID:
XP_034988025
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Position
LG11:48689567..48771129
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AA seq
468 aa
AA seq
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MLCLVIAAMKAQIEIIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYSCPRQKNC
LIDRTSRNRCQHCRLQKCLAVGMSRDAVKFGRMSKKQRDSLYAEVQKHRMQQQQRDHQQQ
PGEAEPLTPTYNITPNGLTELHDDLSNYIDGHTPEGSKADSAVSSFYLDIQPSPDQSGLD
INGIKPEPICDYTPASGFFPYCSFTNGETSPTVSMAELEHLAQNISKSHMETCQYLREEL
QQITWQTFLQEEIENYQSKQREVMWQLCAVKITEAIQYVVEFAKRIDGFMELCQNDQIVL
LKAGSLEVVFIRMCRAFDSQNNAVYFDGKYASPDVFKSLGCEDFISFVFEFGKSLCSMHL
TEDEIALFSAFVLLSADRSWLQEKVKIEKLQQKIQLALQHVLQKNHREDGILTKLICKVS
TLRALCGRHTEKLMAFRAIYPDIVRLHFPPLYKELFTSEFEPAMQMDG
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgctgtgcttggtgatcgccgcgatgaaagctcaaattgaaattattccatgcaagatc
tgcggagacaaatcatcaggaatccattatggtgtcattacctgtgaaggctgtaagggc
tttttcaggaggagtcagcaaagtaacgccacatattcctgtccccgacagaagaactgt
ttaattgatcgaaccagtagaaaccgttgccaacactgtcgtttacagaaatgccttgct
gtggggatgtctcgagatgctgtaaagtttggtcgaatgtcaaaaaagcagagggacagc
ttgtatgcagaagtgcagaaacaccggatgcagcaacaacagcgagatcaccagcagcaa
cccggagaggcagagccattgacgccaacatacaatatcactcccaatgggctcacagaa
ctgcacgatgacctcagtaattacattgatgggcatacccctgaaggtagcaaagcagac
tctgccgttagcagcttctacttagacatacagccttctccagatcagtcggggcttgat
attaatggaatcaaaccagaaccgatatgcgactacacacctgcatcgggcttctttcct
tattgctcttttacaaatggagagacttctcctactgtgtccatggcagaattagaacat
ctcgcacagaacatttccaaatcgcacatggaaacttgccagtacttgagggaggagttg
cagcaaataacatggcaaacttttctacaggaagaaatcgagaactaccagagcaagcaa
agggaggtaatgtggcaattgtgtgccgtgaaaataacagaagcaatacagtacgtggtg
gagtttgccaaacgcattgatggctttatggaactgtgtcaaaatgatcaaattgtgctt
ttaaaagcagggtctttagaggttgtgtttatcagaatgtgccgtgcctttgactcccag
aacaacgcagtgtacttcgatggcaaatatgctagccccgatgtattcaagtcattaggg
tgtgaagatttcattagttttgtttttgaatttggaaaaagcttatgttctatgcacctt
actgaagatgagattgcattattttcagcttttgttttactctctgcagaccgatcatgg
cttcaggagaaagtaaaaatagaaaagctccaacagaagattcagttagcacttcaacat
gtattacagaagaaccaccgagaagatggaatcttaacaaagctaatatgcaaagtgtct
actttaagagcactgtgcgggcgacatacagaaaagcttatggcgtttagagcaatatac
ccagacattgtgcgacttcattttcctccattgtacaaggagttgttcacttcagaattt
gagccagcaatgcaaatggatgggtaa
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